Wall clock time and date at job start Thu Mar 4 2021 15:52:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28469 * 124.88689 * 2 1 4 4 C 1.31809 * 110.07336 * 180.30388 * 3 2 1 5 5 C 1.47705 * 126.51815 * 179.72152 * 4 3 2 6 6 O 1.21574 * 119.99710 * 180.02562 * 5 4 3 7 7 N 1.34771 * 120.00078 * 0.02562 * 5 4 3 8 8 C 1.47218 * 136.18199 * 359.97438 * 7 5 4 9 9 C 1.53633 * 88.20877 * 206.42144 * 8 7 5 10 10 C 1.46288 * 136.17998 * 179.63681 * 7 5 4 11 11 C 1.53070 * 120.98872 * 27.44197 * 10 7 5 12 12 C 1.53913 * 86.84756 * 209.65906 * 11 10 7 13 13 C 1.50701 * 113.58473 * 139.45775 * 12 11 10 14 14 N 1.30505 * 125.64853 * 167.34847 * 13 12 11 15 15 C 1.34127 * 109.25771 * 180.02562 * 14 13 12 16 16 C 1.34675 * 108.01952 * 0.02562 * 15 14 13 17 17 N 1.35048 * 125.65203 * 347.05224 * 13 12 11 18 18 C 1.53079 * 120.98164 * 279.40728 * 10 7 5 19 19 C 1.41511 * 106.96208 * 359.72495 * 4 3 2 20 20 C 1.35040 * 124.88086 * 179.83203 * 2 1 3 21 21 C 1.50699 * 126.38757 * 359.96038 * 20 2 1 22 22 O 1.42901 * 109.46830 * 329.71780 * 21 20 2 23 23 Si 1.86298 * 109.46950 * 209.72217 * 21 20 2 24 24 H 1.08993 * 109.47246 * 270.17296 * 1 2 3 25 25 H 1.09007 * 109.47038 * 30.17346 * 1 2 3 26 26 H 1.08998 * 109.47061 * 150.16694 * 1 2 3 27 27 H 1.08997 * 113.43355 * 321.25867 * 8 7 5 28 28 H 1.09006 * 113.42877 * 91.53560 * 8 7 5 29 29 H 1.08999 * 114.27397 * 88.17025 * 9 8 7 30 30 H 1.08996 * 114.28099 * 221.02529 * 9 8 7 31 31 H 1.09010 * 113.65157 * 324.15267 * 11 10 7 32 32 H 1.09002 * 113.64950 * 95.16700 * 11 10 7 33 33 H 1.08991 * 113.58925 * 270.27822 * 12 11 10 34 34 H 1.07999 * 125.99081 * 179.97438 * 15 14 13 35 35 H 1.07993 * 126.59054 * 180.02562 * 16 15 14 36 36 H 0.96996 * 126.39316 * 359.97438 * 17 13 12 37 37 H 1.09003 * 113.65432 * 264.82777 * 18 10 7 38 38 H 1.09000 * 113.65453 * 35.76440 * 18 10 7 39 39 H 1.07995 * 127.24551 * 180.02562 * 19 4 3 40 40 H 1.08991 * 109.47351 * 89.71927 * 21 20 2 41 41 H 0.96708 * 114.00246 * 299.99864 * 22 21 20 42 42 H 1.48506 * 109.99834 * 180.02562 * 23 21 20 43 43 H 1.48502 * 110.00011 * 301.31529 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7168 -0.0066 5 6 4.6273 1.6397 -0.0146 6 8 5.7597 1.1974 -0.0206 7 7 4.4242 2.9720 -0.0151 8 6 3.2564 3.8685 -0.0099 9 6 4.1282 4.9292 -0.6992 10 6 5.2664 4.1681 -0.0152 11 6 6.6726 4.1418 -0.6194 12 6 7.0412 5.2292 0.4056 13 6 8.4055 5.0429 1.0180 14 7 9.0491 5.9306 1.7258 15 6 10.2303 5.4214 2.1059 16 6 10.3224 4.1709 1.6146 17 7 9.1622 3.9278 0.9300 18 6 5.8950 4.6894 1.2796 19 6 3.5272 -0.6973 -0.0046 20 6 2.2373 -1.1078 0.0032 21 6 1.7533 -2.5349 0.0083 22 8 0.4989 -2.6101 0.6886 23 14 2.9990 -3.6099 0.8820 24 1 -0.3633 0.0031 1.0276 25 1 -0.3633 0.8885 -0.5166 26 1 -0.3633 -0.8915 -0.5112 27 1 2.4342 3.5130 -0.6308 28 1 2.9344 4.1549 0.9913 29 1 4.1332 4.8669 -1.7875 30 1 3.9809 5.9424 -0.3254 31 1 7.1974 3.1990 -0.4647 32 1 6.7107 4.4845 -1.6534 33 1 6.8736 6.2438 0.0444 34 1 10.9771 5.9261 2.7009 35 1 11.1500 3.4887 1.7413 36 1 8.9285 3.1089 0.4659 37 1 5.3106 5.4706 1.7658 38 1 6.2010 3.8998 1.9659 39 1 4.4107 -1.3182 -0.0081 40 1 1.6313 -2.8808 -1.0181 41 1 0.5327 -2.3170 1.6096 42 1 2.5337 -5.0202 0.8932 43 1 4.3163 -3.5157 0.2029 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15706034_13259642.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:52:34 Heat of formation + Delta-G solvation = 152.063906 kcal Electronic energy + Delta-G solvation = -28190.618842 eV Core-core repulsion = 24243.100713 eV Total energy + Delta-G solvation = -3947.518129 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.148 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.88360 -43.18912 -41.98760 -39.40905 -38.04004 -36.95784 -34.42316 -33.46668 -32.77431 -31.05009 -30.30412 -28.42546 -27.07030 -26.82278 -25.95056 -24.56756 -23.50438 -22.41994 -22.09405 -21.64535 -21.00460 -19.34444 -19.03382 -18.41550 -17.64170 -17.47325 -17.03515 -16.92544 -16.77316 -16.35395 -15.91397 -15.80794 -15.55221 -15.19684 -15.13610 -15.04567 -14.70522 -14.41460 -14.05919 -13.91778 -13.70227 -13.57025 -13.46149 -13.37022 -13.12828 -12.66340 -12.49693 -12.39116 -12.28496 -11.89598 -11.82471 -11.32157 -11.12093 -11.07452 -11.04981 -10.94282 -10.26217 -10.01808 -9.75330 -9.37235 -5.01460 0.39215 0.75476 1.05953 1.15557 1.46441 1.63653 1.76987 1.94949 2.08342 2.18150 2.21716 3.04438 3.19018 3.27630 3.30396 3.33840 3.34839 3.49436 3.70269 3.81493 3.92379 4.18894 4.26414 4.31595 4.32561 4.38388 4.40029 4.44841 4.49341 4.51577 4.56370 4.58224 4.65851 4.71700 4.72496 4.75218 4.87767 4.92195 4.97100 5.10455 5.19447 5.25052 5.29145 5.65595 5.76807 6.39033 6.52684 6.56508 6.69953 7.03129 7.08316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.259 5.259 3 N -0.252 5.252 4 C -0.035 4.035 5 C 0.624 3.376 6 O -0.572 6.572 7 N -0.625 5.625 8 C 0.107 3.893 9 C -0.112 4.112 10 C 0.135 3.865 11 C -0.136 4.136 12 C -0.014 4.014 13 C 0.209 3.791 14 N -0.524 5.524 15 C -0.057 4.057 16 C -0.051 4.051 17 N -0.563 5.563 18 C -0.111 4.111 19 C -0.200 4.200 20 C -0.005 4.005 21 C -0.033 4.033 22 O -0.542 6.542 23 Si 0.785 3.215 24 H 0.109 0.891 25 H 0.100 0.900 26 H 0.115 0.885 27 H 0.086 0.914 28 H 0.099 0.901 29 H 0.108 0.892 30 H 0.127 0.873 31 H 0.075 0.925 32 H 0.097 0.903 33 H 0.140 0.860 34 H 0.183 0.817 35 H 0.206 0.794 36 H 0.426 0.574 37 H 0.108 0.892 38 H 0.065 0.935 39 H 0.157 0.843 40 H 0.128 0.872 41 H 0.398 0.602 42 H -0.279 1.279 43 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.318 -0.405 0.576 7.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.049 5.049 3 N -0.090 5.090 4 C -0.193 4.193 5 C 0.413 3.587 6 O -0.451 6.451 7 N -0.357 5.357 8 C -0.015 4.015 9 C -0.149 4.149 10 C 0.050 3.950 11 C -0.175 4.175 12 C -0.034 4.034 13 C -0.055 4.055 14 N -0.244 5.244 15 C -0.204 4.204 16 C -0.185 4.185 17 N -0.166 5.166 18 C -0.151 4.151 19 C -0.229 4.229 20 C -0.131 4.131 21 C -0.144 4.144 22 O -0.349 6.349 23 Si 0.688 3.312 24 H 0.128 0.872 25 H 0.119 0.881 26 H 0.133 0.867 27 H 0.105 0.895 28 H 0.117 0.883 29 H 0.126 0.874 30 H 0.145 0.855 31 H 0.093 0.907 32 H 0.115 0.885 33 H 0.158 0.842 34 H 0.200 0.800 35 H 0.223 0.777 36 H 0.266 0.734 37 H 0.126 0.874 38 H 0.084 0.916 39 H 0.175 0.825 40 H 0.145 0.855 41 H 0.249 0.751 42 H -0.206 1.206 43 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -7.478 -0.038 0.168 7.480 hybrid contribution 1.112 -1.907 -0.790 2.344 sum -6.367 -1.945 -0.622 6.686 Atomic orbital electron populations 1.22664 0.70211 1.06582 1.06588 1.45795 1.09153 1.01670 1.48249 1.73536 1.02380 1.14298 1.18776 1.21673 0.91068 0.93823 1.12756 1.16626 0.86358 0.80153 0.75544 1.90733 1.24154 1.76957 1.53216 1.49541 1.13132 1.02356 1.70664 1.23165 0.89976 0.86207 1.02119 1.23296 0.90965 0.99411 1.01259 1.23082 0.92057 0.82688 0.97169 1.23235 0.95710 0.98309 1.00217 1.20877 0.85079 1.01647 0.95794 1.23271 0.96832 0.83745 1.01668 1.70185 1.07411 1.31296 1.15503 1.22774 0.96767 0.94560 1.06326 1.23304 0.92418 1.00593 1.02181 1.43398 1.15462 1.15723 1.42060 1.23119 0.95730 1.00627 0.95643 1.21583 0.97349 0.93676 1.10243 1.22105 0.90513 0.92348 1.08110 1.24762 0.94764 0.91957 1.02948 1.86480 1.28870 1.88948 1.30640 0.93215 0.73489 0.75770 0.88675 0.87237 0.88094 0.86710 0.89515 0.88336 0.87410 0.85510 0.90680 0.88464 0.84222 0.79979 0.77713 0.73447 0.87402 0.91591 0.82541 0.85481 0.75129 1.20580 1.21998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.66 10.12 127.77 1.29 0.63 16 2 N -0.26 0.13 3.70 -355.92 -1.32 -1.18 16 3 N -0.25 -1.02 10.55 -48.17 -0.51 -1.53 16 4 C -0.04 -0.29 7.10 42.46 0.30 0.01 16 5 C 0.62 6.57 8.07 86.75 0.70 7.27 16 6 O -0.57 -9.34 16.68 -3.95 -0.07 -9.41 16 7 N -0.62 -2.44 3.69 -824.16 -3.04 -5.48 16 8 C 0.11 -0.34 7.78 82.27 0.64 0.30 16 9 C -0.11 0.76 8.25 30.83 0.25 1.01 16 10 C 0.13 -0.07 1.44 -0.48 0.00 -0.07 16 11 C -0.14 -0.14 7.25 30.93 0.22 0.09 16 12 C -0.01 -0.01 4.29 -10.92 -0.05 -0.06 16 13 C 0.21 1.51 7.36 138.13 1.02 2.53 16 14 N -0.52 -6.15 11.25 -188.12 -2.12 -8.27 16 15 C -0.06 -0.46 11.87 83.52 0.99 0.53 16 16 C -0.05 -0.21 12.04 83.09 1.00 0.79 16 17 N -0.56 -2.74 5.94 -186.26 -1.11 -3.84 16 18 C -0.11 -0.04 7.51 30.93 0.23 0.19 16 19 C -0.20 -1.17 9.35 22.41 0.21 -0.96 16 20 C -0.01 0.00 6.17 41.40 0.26 0.25 16 21 C -0.03 0.14 2.87 71.24 0.20 0.35 16 22 O -0.54 4.06 10.42 -148.98 -1.55 2.51 16 23 Si 0.78 -2.65 31.37 68.60 2.15 -0.50 16 24 H 0.11 -1.37 8.14 -2.39 -0.02 -1.39 16 25 H 0.10 -0.97 8.14 -2.38 -0.02 -0.99 16 26 H 0.11 -1.09 6.78 -2.39 -0.02 -1.10 16 27 H 0.09 -0.24 7.54 -2.39 -0.02 -0.25 16 28 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 29 H 0.11 -0.79 8.14 -2.39 -0.02 -0.81 16 30 H 0.13 -1.49 8.14 -2.39 -0.02 -1.51 16 31 H 0.07 0.40 5.77 -2.38 -0.01 0.39 16 32 H 0.10 -0.14 8.14 -2.39 -0.02 -0.16 16 33 H 0.14 -0.28 8.14 -2.39 -0.02 -0.30 16 34 H 0.18 0.67 8.06 -2.91 -0.02 0.64 16 35 H 0.21 -0.63 8.06 -2.91 -0.02 -0.65 16 36 H 0.43 0.92 7.53 -92.71 -0.70 0.22 16 37 H 0.11 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.07 0.37 8.09 -2.39 -0.02 0.35 16 39 H 0.16 1.02 6.84 -2.91 -0.02 1.00 16 40 H 0.13 -0.57 7.96 -2.39 -0.02 -0.59 16 41 H 0.40 -5.77 8.70 -74.05 -0.64 -6.41 16 42 H -0.28 -0.55 7.11 99.48 0.71 0.16 16 43 H -0.29 -1.11 6.83 99.48 0.68 -0.43 16 Total: 0.00 -27.06 359.47 -0.54 -27.60 By element: Atomic # 1 Polarization: -12.51 SS G_CDS: -0.26 Total: -12.78 kcal Atomic # 6 Polarization: 5.60 SS G_CDS: 7.28 Total: 12.88 kcal Atomic # 7 Polarization: -12.22 SS G_CDS: -8.09 Total: -20.31 kcal Atomic # 8 Polarization: -5.28 SS G_CDS: -1.62 Total: -6.90 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: 2.15 Total: -0.50 kcal Total: -27.06 -0.54 -27.60 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15706034_13259642.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.662 kcal (2) G-P(sol) polarization free energy of solvation -27.056 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 152.607 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.543 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.598 kcal (6) G-S(sol) free energy of system = (1) + (5) 152.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds