Wall clock time and date at job start Thu Mar 4 2021 15:41:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86306 * 109.47360 * 2 1 4 4 H 1.48494 * 109.47057 * 179.97438 * 3 2 1 5 5 H 1.48492 * 109.46785 * 300.00582 * 3 2 1 6 6 H 1.48501 * 109.46819 * 60.00020 * 3 2 1 7 7 C 1.50706 * 109.47436 * 120.00221 * 2 1 3 8 8 C 1.35007 * 126.42622 * 209.95655 * 7 2 1 9 9 N 1.33587 * 108.65149 * 180.02562 * 8 7 2 10 10 C 1.32417 * 109.22365 * 0.02562 * 9 8 7 11 11 C 1.41256 * 132.11425 * 180.02562 * 10 9 8 12 12 Br 1.89096 * 120.25641 * 359.97043 * 11 10 9 13 13 C 1.35708 * 119.48668 * 180.25047 * 11 10 9 14 14 C 1.41765 * 119.52869 * 359.50405 * 13 11 10 15 15 C 1.47575 * 120.00167 * 180.25223 * 14 13 11 16 16 O 1.21601 * 119.99954 * 128.74770 * 15 14 13 17 17 N 1.34777 * 120.00437 * 308.74081 * 15 14 13 18 18 C 1.46398 * 118.75533 * 185.63346 * 17 15 14 19 19 C 1.53922 * 109.06198 * 253.44763 * 18 17 15 20 20 Si 1.85195 * 107.12428 * 308.57348 * 19 18 17 21 21 C 1.87458 * 111.52380 * 168.31520 * 20 19 18 22 22 C 1.55694 * 100.84512 * 114.79646 * 21 20 19 23 23 C 1.53776 * 111.39786 * 28.00041 * 22 21 20 24 24 C 1.56402 * 109.77348 * 312.17274 * 23 22 21 25 25 C 1.85203 * 110.14346 * 43.93516 * 20 19 18 26 26 C 1.46402 * 118.75319 * 5.89878 * 17 15 14 27 27 C 1.36486 * 119.98391 * 0.49596 * 14 13 11 28 28 N 1.35944 * 120.50648 * 359.75739 * 27 14 13 29 29 H 0.96704 * 113.99596 * 299.99609 * 1 2 3 30 30 H 1.09005 * 109.47057 * 240.00125 * 2 1 3 31 31 H 1.08000 * 125.67443 * 0.02562 * 8 7 2 32 32 H 1.07995 * 120.22989 * 179.71993 * 13 11 10 33 33 H 1.08993 * 109.59174 * 13.19937 * 18 17 15 34 34 H 1.08997 * 109.58729 * 133.62718 * 18 17 15 35 35 H 1.08994 * 110.00253 * 189.12455 * 19 18 17 36 36 H 1.08994 * 109.84017 * 67.93204 * 19 18 17 37 37 H 1.08996 * 111.14029 * 232.69611 * 21 20 19 38 38 H 1.09000 * 111.13768 * 356.90725 * 21 20 19 39 39 H 1.08992 * 109.10282 * 267.48822 * 22 21 20 40 40 H 1.09004 * 109.09643 * 148.51048 * 22 21 20 41 41 H 1.08994 * 109.42185 * 192.08097 * 23 22 21 42 42 H 1.08999 * 109.42156 * 72.26421 * 23 22 21 43 43 H 1.08998 * 111.48971 * 281.94529 * 24 23 22 44 44 H 1.08994 * 111.49404 * 156.82838 * 24 23 22 45 45 H 1.08995 * 109.92474 * 196.56118 * 25 20 19 46 46 H 1.09006 * 109.92345 * 75.36277 * 25 20 19 47 47 H 1.08999 * 109.58694 * 226.38038 * 26 17 15 48 48 H 1.09011 * 109.58347 * 346.79780 * 26 17 15 49 49 H 1.08002 * 119.74833 * 179.77795 * 27 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 3.5350 1.7564 0.0006 5 1 1.5549 2.4565 -1.2124 6 1 1.5550 2.4565 1.2125 7 6 1.9314 -0.7105 1.2305 8 6 3.0860 -0.4617 1.8845 9 7 3.1772 -1.2971 2.9230 10 6 2.1075 -2.0771 2.9504 11 6 1.7131 -3.1135 3.8254 12 35 2.8137 -3.5994 5.2842 13 6 0.5408 -3.7616 3.6076 14 6 -0.2746 -3.3815 2.5120 15 6 -1.5541 -4.0755 2.2688 16 8 -2.5756 -3.4328 2.1200 17 7 -1.5905 -5.4215 2.2114 18 6 -2.8473 -6.0771 1.8456 19 6 -3.4631 -6.7200 3.1013 20 14 -2.1437 -7.7558 3.8863 21 6 -2.6402 -8.3150 5.6053 22 6 -2.7363 -9.8549 5.3960 23 6 -1.7969 -10.3283 4.2744 24 6 -1.9682 -9.4120 3.0186 25 6 -0.5379 -6.8334 3.9093 26 6 -0.3732 -6.1729 2.5229 27 6 0.1264 -2.3772 1.6794 28 7 1.3031 -1.7312 1.8940 29 1 -0.3933 0.4417 0.7651 30 1 1.7923 -0.5138 -0.8900 31 1 3.8146 0.2879 1.6132 32 1 0.2297 -4.5588 4.2664 33 1 -3.5396 -5.3396 1.4397 34 1 -2.6537 -6.8486 1.1003 35 1 -4.3102 -7.3464 2.8222 36 1 -3.7866 -5.9430 3.7939 37 1 -1.8723 -8.0648 6.3372 38 1 -3.6050 -7.8963 5.8915 39 1 -3.7621 -10.1162 5.1363 40 1 -2.4660 -10.3584 6.3242 41 1 -2.0398 -11.3570 4.0083 42 1 -0.7647 -10.2788 4.6212 43 1 -2.8677 -9.6665 2.4583 44 1 -1.0839 -9.4375 2.3820 45 1 0.2849 -7.5245 4.0917 46 1 -0.5603 -6.0679 4.6851 47 1 -0.2157 -6.9428 1.7677 48 1 0.4802 -5.4950 2.5401 49 1 -0.4961 -2.0932 0.8437 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15733048_12335884.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:41:35 Heat of formation + Delta-G solvation = 9.129254 kcal Electronic energy + Delta-G solvation = -32861.888757 eV Core-core repulsion = 28574.537232 eV Total energy + Delta-G solvation = -4287.351525 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 437.068 amu Computer time = 5.17 seconds Orbital eigenvalues (eV) -44.28053 -41.55123 -38.60003 -38.02135 -37.52524 -36.12650 -35.31304 -33.29186 -32.15737 -31.66908 -30.70142 -30.01906 -29.65554 -26.91195 -25.96049 -24.85709 -24.19948 -24.06265 -23.42019 -22.48925 -21.05708 -20.54544 -19.50297 -18.71281 -18.21271 -17.79056 -17.48348 -17.38031 -16.36363 -16.19916 -16.05925 -15.91299 -15.87950 -15.64521 -15.52515 -15.09341 -14.99926 -14.67253 -14.47301 -14.22507 -14.19314 -14.00986 -13.59749 -13.41888 -13.32468 -13.18692 -13.03890 -12.68484 -12.61968 -12.50399 -12.30528 -12.11661 -12.10378 -12.06750 -11.92950 -11.54350 -11.39597 -11.33634 -11.32867 -11.18111 -10.87214 -10.43395 -10.40481 -10.22587 -10.04578 -9.79607 -9.08107 -0.85531 -0.34516 0.18303 0.85018 1.22428 1.25741 1.51664 1.57344 1.68078 1.77130 1.81913 1.86277 1.94777 1.98048 2.05194 2.64905 2.80634 2.96795 3.11847 3.31829 3.46261 3.48606 3.81040 4.02463 4.07662 4.12917 4.15827 4.17545 4.25059 4.29463 4.34746 4.36889 4.44928 4.45545 4.48729 4.62160 4.67342 4.72543 4.74543 4.85963 4.95041 5.01601 5.14045 5.15687 5.23168 5.26920 5.34060 5.36037 5.40551 5.50171 5.55661 5.57717 5.60341 6.08133 6.36414 6.49145 6.85877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.049 4.049 3 Si 1.010 2.990 4 H -0.237 1.237 5 H -0.260 1.260 6 H -0.265 1.265 7 C -0.082 4.082 8 C 0.028 3.972 9 N -0.494 5.494 10 C 0.225 3.775 11 C -0.078 4.078 12 Br 0.005 6.995 13 C -0.032 4.032 14 C -0.162 4.162 15 C 0.572 3.428 16 O -0.559 6.559 17 N -0.595 5.595 18 C 0.116 3.884 19 C -0.441 4.441 20 Si 1.060 2.940 21 C -0.425 4.425 22 C -0.124 4.124 23 C -0.126 4.126 24 C -0.408 4.408 25 C -0.441 4.441 26 C 0.096 3.904 27 C 0.148 3.852 28 N -0.354 5.354 29 H 0.389 0.611 30 H 0.141 0.859 31 H 0.210 0.790 32 H 0.180 0.820 33 H 0.077 0.923 34 H 0.107 0.893 35 H 0.098 0.902 36 H 0.066 0.934 37 H 0.078 0.922 38 H 0.072 0.928 39 H 0.058 0.942 40 H 0.055 0.945 41 H 0.060 0.940 42 H 0.070 0.930 43 H 0.079 0.921 44 H 0.091 0.909 45 H 0.116 0.884 46 H 0.084 0.916 47 H 0.110 0.890 48 H 0.091 0.909 49 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.598 -3.469 -2.747 4.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.158 4.158 3 Si 0.829 3.171 4 H -0.160 1.160 5 H -0.184 1.184 6 H -0.189 1.189 7 C -0.193 4.193 8 C -0.122 4.122 9 N -0.213 5.213 10 C -0.021 4.021 11 C -0.161 4.161 12 Br 0.090 6.910 13 C -0.058 4.058 14 C -0.170 4.170 15 C 0.359 3.641 16 O -0.438 6.438 17 N -0.327 5.327 18 C -0.005 4.005 19 C -0.526 4.526 20 Si 1.250 2.750 21 C -0.510 4.510 22 C -0.162 4.162 23 C -0.164 4.164 24 C -0.494 4.494 25 C -0.527 4.527 26 C -0.025 4.025 27 C 0.022 3.978 28 N -0.027 5.027 29 H 0.239 0.761 30 H 0.159 0.841 31 H 0.227 0.773 32 H 0.197 0.803 33 H 0.095 0.905 34 H 0.125 0.875 35 H 0.117 0.883 36 H 0.085 0.915 37 H 0.097 0.903 38 H 0.090 0.910 39 H 0.076 0.924 40 H 0.074 0.926 41 H 0.079 0.921 42 H 0.089 0.911 43 H 0.098 0.902 44 H 0.109 0.891 45 H 0.135 0.865 46 H 0.102 0.898 47 H 0.128 0.872 48 H 0.109 0.891 49 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges 1.532 -2.751 -2.361 3.935 hybrid contribution -1.282 -0.135 0.114 1.295 sum 0.249 -2.886 -2.247 3.666 Atomic orbital electron populations 1.86473 1.17433 1.81527 1.50354 1.25026 0.84734 1.11280 0.94805 0.84863 0.80706 0.71190 0.80300 1.16004 1.18430 1.18928 1.22444 0.97895 0.96333 1.02649 1.22914 0.96933 1.00436 0.91891 1.70807 1.20234 1.08096 1.22177 1.20632 0.89975 0.99882 0.91580 1.20522 0.98580 0.99099 0.97879 1.96826 1.66481 1.90517 1.37147 1.21543 0.90193 0.98044 0.95974 1.19268 0.97966 1.00547 0.99187 1.17846 0.86675 0.83114 0.76515 1.90849 1.35250 1.66673 1.51047 1.48107 1.13123 1.04659 1.66773 1.21384 0.83945 0.97775 0.97395 1.26758 1.13059 1.09125 1.03678 0.78649 0.65202 0.65309 0.65833 1.26709 1.05536 1.00101 1.18653 1.21898 1.00046 0.95604 0.98657 1.22060 0.99983 0.99967 0.94363 1.26744 1.05267 1.16116 1.01269 1.26832 1.18946 1.08560 0.98409 1.22011 0.85488 0.97106 0.97908 1.22088 0.85510 0.90344 0.99816 1.42657 1.15011 1.24034 1.21037 0.76136 0.84117 0.77336 0.80269 0.90497 0.87525 0.88294 0.91518 0.90334 0.90951 0.92357 0.92618 0.92145 0.91105 0.90170 0.89068 0.86513 0.89753 0.87167 0.89089 0.78859 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.50 10.90 -148.98 -1.62 -0.12 16 2 C -0.05 0.20 3.06 71.24 0.22 0.42 16 3 Si 1.01 -4.88 26.61 68.60 1.83 -3.06 16 4 H -0.24 1.37 6.83 99.48 0.68 2.05 16 5 H -0.26 0.56 7.11 99.48 0.71 1.27 16 6 H -0.27 0.52 7.11 99.48 0.71 1.22 16 7 C -0.08 -0.07 6.24 41.01 0.26 0.18 16 8 C 0.03 0.08 10.44 83.68 0.87 0.95 16 9 N -0.49 -4.23 11.30 -194.10 -2.19 -6.43 16 10 C 0.22 1.49 7.59 134.19 1.02 2.51 16 11 C -0.08 -0.29 6.24 22.43 0.14 -0.15 16 12 Br 0.00 0.02 33.72 -20.37 -0.69 -0.67 16 13 C -0.03 0.01 7.06 22.56 0.16 0.17 16 14 C -0.16 -0.18 4.86 -20.35 -0.10 -0.27 16 15 C 0.57 1.58 7.15 86.71 0.62 2.20 16 16 O -0.56 -5.77 16.33 -4.03 -0.07 -5.83 16 17 N -0.60 1.72 2.56 -821.36 -2.10 -0.38 16 18 C 0.12 -0.41 5.86 86.71 0.51 0.10 16 19 C -0.44 2.03 5.19 72.29 0.38 2.40 16 20 Si 1.06 -8.65 10.74 68.60 0.74 -7.91 16 21 C -0.43 1.60 5.84 72.91 0.43 2.03 16 22 C -0.12 0.31 6.10 31.79 0.19 0.50 16 23 C -0.13 0.54 5.97 32.04 0.19 0.73 16 24 C -0.41 2.95 5.95 73.17 0.44 3.39 16 25 C -0.44 4.05 4.81 72.47 0.35 4.39 16 26 C 0.10 -0.75 5.23 86.89 0.45 -0.29 16 27 C 0.15 0.21 10.01 83.65 0.84 1.05 16 28 N -0.35 -1.18 2.93 -337.71 -0.99 -2.17 16 29 H 0.39 -2.69 8.70 -74.05 -0.64 -3.34 16 30 H 0.14 -0.99 7.96 -2.38 -0.02 -1.01 16 31 H 0.21 -0.62 6.72 -2.91 -0.02 -0.64 16 32 H 0.18 -0.78 4.87 -2.91 -0.01 -0.80 16 33 H 0.08 0.10 6.96 -2.39 -0.02 0.08 16 34 H 0.11 -0.93 8.08 -2.39 -0.02 -0.95 16 35 H 0.10 -0.60 7.97 -2.39 -0.02 -0.62 16 36 H 0.07 -0.06 7.97 -2.39 -0.02 -0.08 16 37 H 0.08 -0.31 8.03 -2.39 -0.02 -0.33 16 38 H 0.07 -0.18 8.03 -2.39 -0.02 -0.20 16 39 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 40 H 0.05 -0.07 8.14 -2.38 -0.02 -0.09 16 41 H 0.06 -0.19 8.14 -2.39 -0.02 -0.21 16 42 H 0.07 -0.40 8.14 -2.39 -0.02 -0.41 16 43 H 0.08 -0.54 8.04 -2.39 -0.02 -0.56 16 44 H 0.09 -0.84 8.04 -2.39 -0.02 -0.86 16 45 H 0.12 -1.40 7.97 -2.39 -0.02 -1.42 16 46 H 0.08 -0.73 6.12 -2.38 -0.01 -0.74 16 47 H 0.11 -1.32 8.08 -2.39 -0.02 -1.34 16 48 H 0.09 -0.63 4.55 -2.38 -0.01 -0.64 16 49 H 0.19 -0.03 6.70 -2.91 -0.02 -0.05 16 Total: 0.00 -18.99 401.08 2.94 -16.05 By element: Atomic # 1 Polarization: -10.87 SS G_CDS: 1.09 Total: -9.79 kcal Atomic # 6 Polarization: 13.35 SS G_CDS: 6.95 Total: 20.31 kcal Atomic # 7 Polarization: -3.69 SS G_CDS: -5.29 Total: -8.97 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.69 Total: -5.96 kcal Atomic # 14 Polarization: -13.53 SS G_CDS: 2.56 Total: -10.97 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.67 kcal Total: -18.99 2.94 -16.05 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15733048_12335884.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.179 kcal (2) G-P(sol) polarization free energy of solvation -18.989 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.190 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.050 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 5.17 seconds