Wall clock time and date at job start Thu Mar 4 2021 15:42:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28463 * 124.88496 * 2 1 4 4 C 1.31806 * 110.07355 * 179.97438 * 3 2 1 5 5 C 1.47715 * 126.51717 * 179.97438 * 4 3 2 6 6 O 1.21575 * 119.99756 * 172.69926 * 5 4 3 7 7 N 1.34769 * 120.00112 * 352.70153 * 5 4 3 8 8 C 1.46396 * 118.75770 * 352.98145 * 7 5 4 9 9 C 1.54448 * 108.77644 * 106.59126 * 8 7 5 10 10 Si 1.85191 * 107.11335 * 51.56065 * 9 8 7 11 11 C 1.87461 * 111.52050 * 191.58109 * 10 9 8 12 12 C 1.55684 * 100.84447 * 238.39701 * 11 10 9 13 13 C 1.53782 * 111.39886 * 27.99647 * 12 11 10 14 14 C 1.56399 * 109.77162 * 312.17218 * 13 12 11 15 15 C 1.85193 * 110.13850 * 315.95451 * 10 9 8 16 16 C 1.46398 * 118.75959 * 173.00325 * 7 5 4 17 17 C 1.41498 * 106.96564 * 0.23040 * 4 3 2 18 18 C 1.35035 * 124.88206 * 180.02562 * 2 1 3 19 19 C 1.50699 * 126.38873 * 0.03100 * 18 2 1 20 20 O 1.42904 * 109.47024 * 330.00482 * 19 18 2 21 21 Si 1.86297 * 109.47131 * 210.00142 * 19 18 2 22 22 H 1.48506 * 109.47086 * 60.00581 * 21 19 18 23 23 H 1.48505 * 109.47004 * 180.02562 * 21 19 18 24 24 H 1.48498 * 109.47597 * 300.00118 * 21 19 18 25 25 H 1.09001 * 109.46905 * 90.02414 * 1 2 3 26 26 H 1.09005 * 109.47267 * 210.02411 * 1 2 3 27 27 H 1.09005 * 109.47162 * 330.02270 * 1 2 3 28 28 H 1.09005 * 109.58781 * 346.80062 * 8 7 5 29 29 H 1.09001 * 109.59095 * 226.37835 * 8 7 5 30 30 H 1.09000 * 109.92746 * 292.15928 * 9 8 7 31 31 H 1.08998 * 109.92853 * 170.96170 * 9 8 7 32 32 H 1.09002 * 111.14052 * 356.29223 * 11 10 9 33 33 H 1.09004 * 111.14546 * 120.50198 * 11 10 9 34 34 H 1.08996 * 109.10622 * 267.48214 * 12 11 10 35 35 H 1.09009 * 109.10236 * 148.50036 * 12 11 10 36 36 H 1.08998 * 109.42156 * 192.08374 * 13 12 11 37 37 H 1.08995 * 109.42338 * 72.26082 * 13 12 11 38 38 H 1.09008 * 111.49351 * 281.94975 * 14 13 12 39 39 H 1.09000 * 111.49227 * 156.83299 * 14 13 12 40 40 H 1.09009 * 109.92839 * 163.44503 * 15 10 9 41 41 H 1.09007 * 109.92903 * 284.63888 * 15 10 9 42 42 H 1.09003 * 109.57980 * 13.19050 * 16 7 5 43 43 H 1.09000 * 109.58803 * 133.61230 * 16 7 5 44 44 H 1.07999 * 127.25124 * 179.75388 * 17 4 3 45 45 H 1.09002 * 109.46558 * 90.00286 * 19 18 2 46 46 H 0.96697 * 113.99858 * 299.99827 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7168 0.0006 5 6 4.6272 1.6398 0.0002 6 8 5.7543 1.2044 0.1346 7 7 4.4300 2.9646 -0.1490 8 6 3.0835 3.4452 -0.4636 9 6 2.4877 4.1140 0.7946 10 14 3.7300 5.3490 1.3954 11 6 3.2964 5.9847 3.1048 12 6 3.1823 7.5126 2.8288 13 6 2.7675 7.7906 1.3743 14 6 3.6482 6.9400 0.4013 15 6 5.4298 4.6151 1.3545 16 6 5.5705 3.8688 0.0091 17 6 3.5272 -0.6971 -0.0045 18 6 2.2372 -1.1077 -0.0005 19 6 1.7534 -2.5349 -0.0018 20 8 0.4950 -2.6119 0.6712 21 14 2.9941 -3.6121 0.8762 22 1 3.1523 -3.1444 2.2768 23 1 2.5175 -5.0186 0.8744 24 1 4.3017 -3.5322 0.1769 25 1 -0.3633 -0.0004 -1.0277 26 1 -0.3634 -0.8898 0.5142 27 1 -0.3634 0.8902 0.5135 28 1 2.4563 2.6054 -0.7628 29 1 3.1350 4.1723 -1.2741 30 1 2.3078 3.3634 1.5643 31 1 1.5552 4.6182 0.5411 32 1 2.3462 5.5749 3.4473 33 1 4.0937 5.7723 3.8172 34 1 4.1466 7.9829 3.0209 35 1 2.4383 7.9418 3.5001 36 1 2.9040 8.8495 1.1546 37 1 1.7189 7.5256 1.2395 38 1 4.6368 7.3798 0.2695 39 1 3.1512 6.7872 -0.5568 40 1 6.1775 5.4056 1.4206 41 1 5.5528 3.9161 2.1819 42 1 6.4962 3.2932 0.0053 43 1 5.5822 4.5889 -0.8090 44 1 4.4108 -1.3181 -0.0092 45 1 1.6372 -2.8782 -1.0298 46 1 0.5236 -2.3211 1.5929 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15733048_13259642.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:42:03 Heat of formation + Delta-G solvation = -3.654137 kcal Electronic energy + Delta-G solvation = -26371.977375 eV Core-core repulsion = 22808.567945 eV Total energy + Delta-G solvation = -3563.409430 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 323.158 amu Computer time = 3.60 seconds Orbital eigenvalues (eV) -43.90538 -40.87581 -38.10908 -37.37832 -36.14814 -34.47141 -33.01736 -32.11499 -30.49747 -29.68522 -28.42087 -26.82398 -25.19843 -24.59029 -24.10979 -22.75287 -21.93624 -21.00316 -20.27507 -18.80128 -17.95798 -17.48232 -17.16956 -16.95076 -16.32007 -15.99884 -15.93087 -15.85016 -15.59757 -15.23243 -15.09624 -14.80280 -14.39692 -14.25558 -14.18065 -14.03178 -13.53830 -13.49117 -13.44543 -13.24472 -12.68248 -12.60563 -12.50651 -12.33370 -12.27052 -12.12551 -12.06613 -11.95349 -11.62065 -11.35743 -11.27775 -10.84196 -10.45529 -10.32970 -10.26065 -10.11814 -9.91590 -9.67268 0.40251 0.75242 1.13594 1.48023 1.49098 1.62707 1.76905 1.85253 1.91670 1.95733 2.05589 2.23542 2.66102 3.10934 3.27158 3.35626 3.83596 4.12831 4.14019 4.14909 4.20519 4.31718 4.34010 4.39314 4.41439 4.46672 4.47919 4.53478 4.58291 4.63677 4.70739 4.71416 4.78178 4.83210 4.92215 5.00046 5.11589 5.13271 5.20541 5.25441 5.30709 5.37594 5.43211 5.52241 5.57446 5.58655 5.79174 6.20434 6.45882 6.77989 7.06239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.261 5.261 3 N -0.246 5.246 4 C -0.040 4.040 5 C 0.591 3.409 6 O -0.575 6.575 7 N -0.598 5.598 8 C 0.092 3.908 9 C -0.416 4.416 10 Si 1.046 2.954 11 C -0.419 4.419 12 C -0.123 4.123 13 C -0.124 4.124 14 C -0.403 4.403 15 C -0.439 4.439 16 C 0.113 3.887 17 C -0.205 4.205 18 C -0.007 4.007 19 C -0.040 4.040 20 O -0.538 6.538 21 Si 0.997 3.003 22 H -0.265 1.265 23 H -0.254 1.254 24 H -0.264 1.264 25 H 0.095 0.905 26 H 0.136 0.864 27 H 0.104 0.896 28 H 0.119 0.881 29 H 0.092 0.908 30 H 0.068 0.932 31 H 0.103 0.897 32 H 0.076 0.924 33 H 0.071 0.929 34 H 0.059 0.941 35 H 0.058 0.942 36 H 0.063 0.937 37 H 0.070 0.930 38 H 0.080 0.920 39 H 0.088 0.912 40 H 0.099 0.901 41 H 0.061 0.939 42 H 0.073 0.927 43 H 0.102 0.898 44 H 0.160 0.840 45 H 0.146 0.854 46 H 0.393 0.607 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.926 0.390 -0.680 6.970 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.049 5.049 3 N -0.084 5.084 4 C -0.197 4.197 5 C 0.378 3.622 6 O -0.454 6.454 7 N -0.329 5.329 8 C -0.030 4.030 9 C -0.503 4.503 10 Si 1.237 2.763 11 C -0.505 4.505 12 C -0.160 4.160 13 C -0.162 4.162 14 C -0.490 4.490 15 C -0.524 4.524 16 C -0.008 4.008 17 C -0.233 4.233 18 C -0.133 4.133 19 C -0.152 4.152 20 O -0.345 6.345 21 Si 0.819 3.181 22 H -0.189 1.189 23 H -0.178 1.178 24 H -0.188 1.188 25 H 0.113 0.887 26 H 0.154 0.846 27 H 0.122 0.878 28 H 0.136 0.864 29 H 0.110 0.890 30 H 0.087 0.913 31 H 0.122 0.878 32 H 0.095 0.905 33 H 0.090 0.910 34 H 0.078 0.922 35 H 0.077 0.923 36 H 0.082 0.918 37 H 0.088 0.912 38 H 0.099 0.901 39 H 0.107 0.893 40 H 0.118 0.882 41 H 0.080 0.920 42 H 0.092 0.908 43 H 0.120 0.880 44 H 0.177 0.823 45 H 0.164 0.836 46 H 0.244 0.756 Dipole moment (debyes) X Y Z Total from point charges -6.774 0.332 -0.761 6.825 hybrid contribution 0.774 0.022 0.528 0.938 sum -6.000 0.354 -0.233 6.015 Atomic orbital electron populations 1.22980 0.70363 1.08042 1.06325 1.45985 1.09191 1.01802 1.47956 1.73539 1.02220 1.13300 1.19291 1.21745 0.91173 0.94087 1.12713 1.17442 0.86354 0.82526 0.75832 1.90753 1.24585 1.77618 1.52414 1.48071 1.11388 1.05090 1.68378 1.22256 0.80901 1.02122 0.97705 1.26557 1.11427 1.10347 1.02002 0.78890 0.64876 0.65828 0.66735 1.26626 1.05078 1.01176 1.17582 1.21890 1.01635 0.95744 0.96758 1.22050 1.00108 1.00686 0.93342 1.26678 1.02701 1.15001 1.04641 1.26867 1.21069 1.05859 0.98612 1.21469 0.88584 0.92474 0.98277 1.21660 0.97531 0.93869 1.10219 1.22147 0.90513 0.92648 1.08016 1.24675 0.94013 0.91385 1.05097 1.86465 1.29126 1.88589 1.30336 0.85002 0.76299 0.77925 0.78834 1.18901 1.17792 1.18806 0.88667 0.84639 0.87764 0.86424 0.88977 0.91286 0.87815 0.90530 0.90979 0.92178 0.92301 0.91792 0.91159 0.90093 0.89294 0.88222 0.91990 0.90842 0.87983 0.82255 0.83612 0.75635 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.51 11.00 127.77 1.41 0.90 16 2 N -0.26 0.11 3.70 -355.91 -1.32 -1.20 16 3 N -0.25 -0.98 8.37 -48.18 -0.40 -1.38 16 4 C -0.04 -0.35 6.74 42.46 0.29 -0.06 16 5 C 0.59 7.05 7.62 86.75 0.66 7.71 16 6 O -0.58 -10.86 16.19 -3.95 -0.06 -10.93 16 7 N -0.60 -3.28 2.55 -820.09 -2.09 -5.36 16 8 C 0.09 0.02 5.42 86.89 0.47 0.49 16 9 C -0.42 0.95 5.18 72.47 0.38 1.32 16 10 Si 1.05 -3.42 10.74 68.60 0.74 -2.69 16 11 C -0.42 0.25 5.84 72.91 0.43 0.67 16 12 C -0.12 0.05 6.09 31.78 0.19 0.25 16 13 C -0.12 0.25 5.97 32.04 0.19 0.44 16 14 C -0.40 1.50 5.95 73.17 0.43 1.93 16 15 C -0.44 -0.38 5.21 72.49 0.38 0.00 16 16 C 0.11 0.39 5.96 86.91 0.52 0.91 16 17 C -0.20 -1.29 9.36 22.41 0.21 -1.08 16 18 C -0.01 0.00 6.17 41.40 0.26 0.25 16 19 C -0.04 0.22 2.99 71.24 0.21 0.43 16 20 O -0.54 4.25 10.02 -148.98 -1.49 2.75 16 21 Si 1.00 -2.70 26.64 68.60 1.83 -0.87 16 22 H -0.26 0.02 7.11 99.48 0.71 0.73 16 23 H -0.25 0.37 7.11 99.48 0.71 1.08 16 24 H -0.26 -0.17 6.87 99.48 0.68 0.51 16 25 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 26 H 0.14 -1.57 5.01 -2.38 -0.01 -1.58 16 27 H 0.10 -1.05 8.14 -2.38 -0.02 -1.07 16 28 H 0.12 0.23 4.29 -26.17 -0.11 0.12 16 29 H 0.09 -0.36 8.08 -2.39 -0.02 -0.38 16 30 H 0.07 0.05 7.97 -2.39 -0.02 0.03 16 31 H 0.10 -0.57 7.97 -2.39 -0.02 -0.59 16 32 H 0.08 -0.05 8.03 -2.39 -0.02 -0.07 16 33 H 0.07 0.03 8.03 -2.39 -0.02 0.02 16 34 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 35 H 0.06 0.00 8.14 -2.38 -0.02 -0.02 16 36 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 37 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 38 H 0.08 -0.29 8.04 -2.38 -0.02 -0.31 16 39 H 0.09 -0.47 8.04 -2.39 -0.02 -0.49 16 40 H 0.10 -0.16 7.97 -2.38 -0.02 -0.18 16 41 H 0.06 0.28 7.97 -2.38 -0.02 0.26 16 42 H 0.07 0.62 6.87 -2.39 -0.02 0.60 16 43 H 0.10 -0.19 8.08 -2.39 -0.02 -0.21 16 44 H 0.16 1.02 6.87 -2.91 -0.02 1.00 16 45 H 0.15 -1.19 7.96 -2.39 -0.02 -1.21 16 46 H 0.39 -5.27 8.39 -74.06 -0.62 -5.89 16 Total: 0.00 -18.75 357.22 4.21 -14.54 By element: Atomic # 1 Polarization: -10.02 SS G_CDS: 0.99 Total: -9.03 kcal Atomic # 6 Polarization: 8.15 SS G_CDS: 6.02 Total: 14.17 kcal Atomic # 7 Polarization: -4.14 SS G_CDS: -3.81 Total: -7.95 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: -1.56 Total: -8.17 kcal Atomic # 14 Polarization: -6.12 SS G_CDS: 2.56 Total: -3.56 kcal Total: -18.75 4.21 -14.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15733048_13259642.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.887 kcal (2) G-P(sol) polarization free energy of solvation -18.747 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.860 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 4.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.60 seconds