Wall clock time and date at job start Thu Mar 4 2021 16:01:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37646 * 125.68016 * 2 1 4 4 C 1.46679 * 126.23027 * 359.97272 * 3 2 1 5 5 O 1.21687 * 120.00099 * 4.67547 * 4 3 2 6 6 N 1.34783 * 119.99929 * 184.40048 * 4 3 2 7 7 C 1.46494 * 120.00157 * 175.12699 * 6 4 3 8 8 H 1.09000 * 112.84710 * 334.66889 * 7 6 4 9 9 C 1.53776 * 113.61655 * 105.86150 * 7 6 4 10 10 C 1.54052 * 86.98358 * 89.16278 * 9 7 6 11 11 F 1.39908 * 113.61233 * 270.88426 * 10 9 7 12 12 C 1.53000 * 113.69503 * 139.99406 * 10 9 7 13 13 N 1.46500 * 109.47609 * 87.46884 * 12 10 9 14 14 C 1.34773 * 120.00313 * 180.02562 * 13 12 10 15 15 O 1.21513 * 120.00067 * 359.97438 * 14 13 12 16 16 O 1.34638 * 120.00127 * 179.97438 * 14 13 12 17 17 C 1.45193 * 116.99911 * 179.97438 * 16 14 13 18 18 C 1.53005 * 109.47381 * 60.00095 * 17 16 14 19 19 C 1.53004 * 109.47234 * 179.97438 * 17 16 14 20 20 C 1.53007 * 109.47306 * 299.99774 * 17 16 14 21 21 C 1.53774 * 87.07735 * 25.43378 * 10 9 7 22 22 C 1.37870 * 107.53656 * 179.71416 * 3 2 1 23 23 C 1.39840 * 107.08455 * 0.25824 * 22 3 2 24 24 C 1.35457 * 107.86191 * 0.02562 * 23 22 3 25 25 C 1.50703 * 125.56028 * 180.02562 * 24 23 22 26 26 O 1.42902 * 109.46897 * 209.97497 * 25 24 23 27 27 Si 1.86297 * 109.47250 * 329.97348 * 25 24 23 28 28 H 1.09003 * 109.47318 * 94.88303 * 1 2 3 29 29 H 1.09004 * 109.47233 * 214.88370 * 1 2 3 30 30 H 1.08996 * 109.47186 * 334.88050 * 1 2 3 31 31 H 0.97000 * 119.99986 * 355.13134 * 6 4 3 32 32 H 1.08996 * 113.62197 * 203.66410 * 9 7 6 33 33 H 1.08996 * 113.61537 * 334.57359 * 9 7 6 34 34 H 1.09002 * 109.47096 * 207.46503 * 12 10 9 35 35 H 1.09006 * 109.47001 * 327.46441 * 12 10 9 36 36 H 0.97005 * 119.99715 * 359.97438 * 13 12 10 37 37 H 1.08997 * 109.47376 * 60.00189 * 18 17 16 38 38 H 1.09002 * 109.47027 * 179.97438 * 18 17 16 39 39 H 1.09000 * 109.46855 * 299.99911 * 18 17 16 40 40 H 1.08997 * 109.46805 * 59.99876 * 19 17 16 41 41 H 1.08993 * 109.47543 * 179.97438 * 19 17 16 42 42 H 1.09004 * 109.47088 * 299.99994 * 19 17 16 43 43 H 1.08991 * 109.46827 * 60.00167 * 20 17 16 44 44 H 1.08996 * 109.46944 * 179.97438 * 20 17 16 45 45 H 1.08997 * 109.46825 * 299.99945 * 20 17 16 46 46 H 1.09005 * 113.61478 * 220.02075 * 21 10 9 47 47 H 1.09000 * 113.61301 * 89.12102 * 21 10 9 48 48 H 1.07999 * 126.46179 * 180.28733 * 22 3 2 49 49 H 1.07997 * 126.07042 * 179.97438 * 23 22 3 50 50 H 1.08993 * 109.47023 * 89.97418 * 25 24 23 51 51 H 0.96699 * 113.99947 * 59.99346 * 26 25 24 52 52 H 1.48494 * 109.99974 * 180.02562 * 27 25 24 53 53 H 1.48507 * 110.00009 * 301.32205 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 -0.0006 5 8 0.6250 2.7646 0.0848 6 7 2.7095 3.5143 -0.0901 7 6 2.2502 4.9012 -0.1983 8 1 1.2515 4.9841 -0.6270 9 6 2.4352 5.7140 1.0940 10 6 3.8355 6.0804 0.5666 11 9 4.8304 5.1697 0.9383 12 6 4.2316 7.5342 0.8322 13 7 4.8568 7.6365 2.1532 14 6 5.2883 8.8311 2.6038 15 8 5.1591 9.8233 1.9144 16 8 5.8625 8.9252 3.8180 17 6 6.3038 10.2431 4.2381 18 6 5.1060 11.1944 4.2750 19 6 6.9252 10.1521 5.6333 20 6 7.3447 10.7717 3.2491 21 6 3.2792 5.8420 -0.8471 22 6 3.5780 0.6888 0.0066 23 6 3.5521 -0.7094 0.0045 24 6 2.2554 -1.1010 -0.0037 25 6 1.7708 -2.5280 -0.0080 26 8 0.5167 -2.6030 -0.6887 27 14 3.0164 -3.6042 -0.8804 28 1 -0.3634 -0.0875 -1.0239 29 1 -0.3634 -0.8430 0.5878 30 1 -0.3633 0.9304 0.4362 31 1 3.6592 3.3171 -0.0829 32 1 1.7616 6.5672 1.1735 33 1 2.4532 5.1021 1.9958 34 1 4.9374 7.8636 0.0697 35 1 3.3427 8.1644 0.8012 36 1 4.9596 6.8445 2.7037 37 1 4.3645 10.8179 4.9796 38 1 5.4373 12.1836 4.5908 39 1 4.6629 11.2593 3.2813 40 1 7.7785 9.4744 5.6075 41 1 7.2570 11.1414 5.9485 42 1 6.1834 9.7757 6.3377 43 1 6.9016 10.8366 2.2555 44 1 7.6756 11.7613 3.5643 45 1 8.1980 10.0941 3.2229 46 1 3.9780 5.3334 -1.5113 47 1 2.8358 6.7302 -1.2973 48 1 4.4583 1.3143 0.0127 49 1 4.4132 -1.3613 0.0079 50 1 1.6483 -2.8731 1.0186 51 1 0.5510 -2.3105 -1.6098 52 1 2.5499 -5.0139 -0.8919 53 1 3.2162 -3.1244 -2.2715 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_10803936.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:01:12 Heat of formation + Delta-G solvation = -115.538321 kcal Electronic energy + Delta-G solvation = -36104.957682 eV Core-core repulsion = 31087.934476 eV Total energy + Delta-G solvation = -5017.023206 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 6.16 seconds Orbital eigenvalues (eV) -48.91749 -42.61830 -41.83022 -40.77539 -39.15046 -38.32982 -37.87525 -36.03135 -35.05799 -34.47468 -33.58531 -31.39257 -29.22834 -28.37628 -28.31339 -27.51959 -27.08302 -26.87729 -24.36431 -23.28863 -22.80909 -21.64438 -21.29568 -20.67936 -20.41505 -19.35122 -18.93134 -18.28439 -17.80850 -17.42785 -17.35298 -17.00377 -16.94454 -16.73489 -16.44959 -16.16339 -15.97532 -15.73098 -15.46373 -15.41748 -15.30170 -15.06606 -14.81318 -14.59413 -14.48886 -14.42961 -14.25891 -13.87020 -13.80847 -13.59650 -13.37719 -13.29583 -13.14567 -13.09913 -12.93725 -12.92278 -12.88309 -12.73594 -12.48804 -12.42227 -12.36362 -11.97785 -11.64068 -11.41969 -11.37417 -11.26626 -11.15848 -10.87716 -10.34863 -10.25657 -9.76474 -9.12463 -4.87518 0.32005 1.08520 1.16024 1.52272 1.69933 1.71944 1.73421 1.99947 2.26196 2.28991 2.91693 2.99065 3.15073 3.18686 3.23580 3.54958 3.57087 3.61679 3.72214 3.72910 3.78320 3.93181 3.94138 4.25896 4.31400 4.34625 4.35359 4.48649 4.49344 4.52383 4.56966 4.60581 4.61347 4.63869 4.69157 4.74415 4.75682 4.81230 4.84564 4.86543 4.87874 4.92135 5.04791 5.07746 5.17066 5.18639 5.26177 5.32221 5.44842 5.53613 5.70870 5.96514 6.11490 6.26977 6.30679 6.40529 7.05072 7.25588 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.406 5.406 3 C -0.086 4.086 4 C 0.591 3.409 5 O -0.582 6.582 6 N -0.691 5.691 7 C 0.116 3.884 8 H 0.105 0.895 9 C -0.162 4.162 10 C 0.086 3.914 11 F -0.190 7.190 12 C 0.131 3.869 13 N -0.702 5.702 14 C 0.646 3.354 15 O -0.590 6.590 16 O -0.370 6.370 17 C 0.126 3.874 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.139 4.139 22 C -0.126 4.126 23 C -0.202 4.202 24 C 0.008 3.992 25 C -0.067 4.067 26 O -0.548 6.548 27 Si 0.815 3.185 28 H 0.078 0.922 29 H 0.094 0.906 30 H 0.086 0.914 31 H 0.415 0.585 32 H 0.128 0.872 33 H 0.076 0.924 34 H 0.084 0.916 35 H 0.102 0.898 36 H 0.415 0.585 37 H 0.061 0.939 38 H 0.087 0.913 39 H 0.065 0.935 40 H 0.069 0.931 41 H 0.099 0.901 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.087 0.913 45 H 0.061 0.939 46 H 0.102 0.898 47 H 0.144 0.856 48 H 0.171 0.829 49 H 0.184 0.816 50 H 0.132 0.868 51 H 0.385 0.615 52 H -0.297 1.297 53 H -0.291 1.291 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.555 -0.670 0.492 4.630 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.080 5.080 3 C -0.199 4.199 4 C 0.380 3.620 5 O -0.464 6.464 6 N -0.342 5.342 7 C 0.010 3.990 8 H 0.123 0.877 9 C -0.201 4.201 10 C 0.067 3.933 11 F -0.171 7.171 12 C 0.008 3.992 13 N -0.363 5.363 14 C 0.399 3.601 15 O -0.481 6.481 16 O -0.285 6.285 17 C 0.090 3.910 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.177 4.177 22 C -0.152 4.152 23 C -0.225 4.225 24 C -0.110 4.110 25 C -0.174 4.174 26 O -0.355 6.355 27 Si 0.717 3.283 28 H 0.096 0.904 29 H 0.112 0.888 30 H 0.104 0.896 31 H 0.253 0.747 32 H 0.146 0.854 33 H 0.094 0.906 34 H 0.102 0.898 35 H 0.120 0.880 36 H 0.251 0.749 37 H 0.080 0.920 38 H 0.106 0.894 39 H 0.084 0.916 40 H 0.088 0.912 41 H 0.118 0.882 42 H 0.088 0.912 43 H 0.084 0.916 44 H 0.106 0.894 45 H 0.080 0.920 46 H 0.120 0.880 47 H 0.162 0.838 48 H 0.188 0.812 49 H 0.201 0.799 50 H 0.150 0.850 51 H 0.234 0.766 52 H -0.224 1.224 53 H -0.218 1.218 Dipole moment (debyes) X Y Z Total from point charges 3.258 -0.672 0.181 3.331 hybrid contribution -0.706 0.053 -0.379 0.803 sum 2.552 -0.619 -0.197 2.633 Atomic orbital electron populations 1.22271 0.75878 1.04912 1.04032 1.43894 1.07097 1.04592 1.52380 1.20163 0.91522 0.87225 1.20972 1.17176 0.85225 0.84282 0.75268 1.90764 1.17820 1.85319 1.52535 1.45276 1.10146 1.04982 1.73840 1.21899 1.00011 0.79903 0.97172 0.87728 1.24247 0.95082 1.01877 0.98907 1.22276 0.86157 0.86040 0.98840 1.92853 1.63185 1.68473 1.92551 1.21909 0.99703 0.94847 0.82746 1.44540 1.63400 1.08028 1.20299 1.18244 0.77048 0.84216 0.80551 1.90914 1.61842 1.36368 1.58984 1.86317 1.72188 1.37264 1.32726 1.22381 0.94597 0.78037 0.95964 1.22476 0.97677 1.00121 1.03426 1.21897 1.01249 1.04463 0.91929 1.22473 0.98289 1.02611 1.00332 1.23975 0.97862 1.01418 0.94473 1.21702 0.94285 0.95945 1.03271 1.21011 0.95478 0.95456 1.10540 1.21508 0.91536 0.89305 1.08618 1.25246 0.93652 0.94081 1.04469 1.86572 1.30635 1.88604 1.29722 0.93318 0.82782 0.73363 0.78824 0.90372 0.88753 0.89569 0.74675 0.85394 0.90573 0.89760 0.88023 0.74880 0.91992 0.89424 0.91591 0.91233 0.88233 0.91249 0.91647 0.89396 0.91990 0.87997 0.83844 0.81171 0.79868 0.85032 0.76610 1.22441 1.21804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.28 9.37 127.77 1.20 1.48 16 2 N -0.41 -1.88 3.16 -519.70 -1.64 -3.52 16 3 C -0.09 -0.39 6.89 40.35 0.28 -0.12 16 4 C 0.59 3.51 7.77 86.45 0.67 4.18 16 5 O -0.58 -7.25 14.22 -4.31 -0.06 -7.31 16 6 N -0.69 0.59 5.16 -444.01 -2.29 -1.70 16 7 C 0.12 -0.40 4.26 45.52 0.19 -0.20 16 8 H 0.10 -0.08 7.57 -2.39 -0.02 -0.10 16 9 C -0.16 0.80 7.35 31.21 0.23 1.02 16 10 C 0.09 -0.52 1.74 -10.18 -0.02 -0.53 16 11 F -0.19 0.55 15.53 44.97 0.70 1.24 16 12 C 0.13 -0.51 5.43 86.38 0.47 -0.05 16 13 N -0.70 -0.07 5.45 -590.85 -3.22 -3.29 16 14 C 0.65 3.90 8.06 129.79 1.05 4.94 16 15 O -0.59 -6.19 11.88 19.80 0.24 -5.96 16 16 O -0.37 -2.04 9.94 -55.48 -0.55 -2.59 16 17 C 0.13 0.34 1.13 -10.79 -0.01 0.33 16 18 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 19 C -0.14 0.29 8.85 71.98 0.64 0.92 16 20 C -0.18 -0.50 8.37 71.98 0.60 0.11 16 21 C -0.14 1.21 7.28 31.12 0.23 1.43 16 22 C -0.13 0.07 10.35 22.57 0.23 0.30 16 23 C -0.20 0.40 9.37 22.01 0.21 0.61 16 24 C 0.01 0.01 6.14 41.34 0.25 0.26 16 25 C -0.07 0.13 2.90 71.24 0.21 0.34 16 26 O -0.55 -0.33 10.53 -148.98 -1.57 -1.90 16 27 Si 0.81 -3.43 31.10 68.60 2.13 -1.30 16 28 H 0.08 0.17 8.14 -2.39 -0.02 0.15 16 29 H 0.09 0.26 7.15 -2.38 -0.02 0.24 16 30 H 0.09 0.68 5.97 -2.39 -0.01 0.66 16 31 H 0.42 -1.82 6.71 -92.71 -0.62 -2.44 16 32 H 0.13 -0.97 7.91 -2.39 -0.02 -0.99 16 33 H 0.08 -0.12 8.14 -2.39 -0.02 -0.14 16 34 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 35 H 0.10 -0.53 7.85 -2.38 -0.02 -0.55 16 36 H 0.41 -0.81 8.14 -92.70 -0.75 -1.57 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 39 H 0.07 0.49 5.88 -2.39 -0.01 0.48 16 40 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 41 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 42 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 43 H 0.06 0.50 5.88 -2.39 -0.01 0.49 16 44 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 45 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 46 H 0.10 -0.94 8.14 -2.38 -0.02 -0.96 16 47 H 0.14 -1.83 8.10 -2.39 -0.02 -1.84 16 48 H 0.17 -1.09 7.45 -2.91 -0.02 -1.11 16 49 H 0.18 -1.64 6.85 -2.91 -0.02 -1.66 16 50 H 0.13 -0.49 7.96 -2.39 -0.02 -0.51 16 51 H 0.38 -1.39 8.70 -74.06 -0.64 -2.03 16 52 H -0.30 -0.85 7.11 99.48 0.71 -0.14 16 53 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 Total: 0.00 -23.78 426.48 -0.26 -24.04 By element: Atomic # 1 Polarization: -11.84 SS G_CDS: -1.02 Total: -12.86 kcal Atomic # 6 Polarization: 8.12 SS G_CDS: 7.02 Total: 15.15 kcal Atomic # 7 Polarization: -1.36 SS G_CDS: -7.16 Total: -8.52 kcal Atomic # 8 Polarization: -15.81 SS G_CDS: -1.95 Total: -17.76 kcal Atomic # 9 Polarization: 0.55 SS G_CDS: 0.70 Total: 1.24 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.13 Total: -1.30 kcal Total: -23.78 -0.26 -24.04 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_10803936.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.498 kcal (2) G-P(sol) polarization free energy of solvation -23.779 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.041 kcal (6) G-S(sol) free energy of system = (1) + (5) -115.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 6.16 seconds