Wall clock time and date at job start Thu Mar 4 2021 16:05:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.34653 * 124.85125 * 2 1 4 4 C 1.36766 * 108.39635 * 179.97438 * 3 2 1 5 5 C 1.47266 * 126.94279 * 179.97438 * 4 3 2 6 6 O 1.21633 * 120.00190 * 179.75168 * 5 4 3 7 7 N 1.34777 * 119.99891 * 0.02562 * 5 4 3 8 8 C 1.46496 * 119.99875 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.85295 * 336.20319 * 8 7 5 10 10 C 1.53782 * 113.61172 * 107.50721 * 8 7 5 11 11 C 1.53786 * 87.08272 * 89.11850 * 10 8 7 12 12 F 1.39905 * 113.61135 * 270.88455 * 11 10 8 13 13 C 1.52995 * 113.61668 * 139.98315 * 11 10 8 14 14 N 1.46496 * 109.47247 * 87.50047 * 13 11 10 15 15 C 1.34781 * 120.00112 * 180.02562 * 14 13 11 16 16 O 1.21512 * 119.99845 * 359.97438 * 15 14 13 17 17 O 1.34632 * 120.00084 * 180.02562 * 15 14 13 18 18 C 1.45200 * 116.99999 * 179.97438 * 17 15 14 19 19 C 1.53000 * 109.47247 * 59.99878 * 18 17 15 20 20 C 1.53009 * 109.47046 * 179.97438 * 18 17 15 21 21 C 1.52999 * 109.47166 * 299.99825 * 18 17 15 22 22 C 1.53776 * 87.07821 * 25.43195 * 11 10 8 23 23 C 1.46687 * 106.11563 * 0.26011 * 4 3 2 24 24 C 1.34479 * 106.33159 * 359.56474 * 23 4 3 25 25 C 1.50702 * 125.56972 * 180.12217 * 24 23 4 26 26 O 1.42902 * 109.47009 * 150.36733 * 25 24 23 27 27 Si 1.86297 * 109.47226 * 30.36967 * 25 24 23 28 28 H 1.09005 * 109.46474 * 90.03159 * 1 2 3 29 29 H 1.09001 * 109.47329 * 210.02659 * 1 2 3 30 30 H 1.08995 * 109.47196 * 330.03053 * 1 2 3 31 31 H 1.08000 * 125.80275 * 359.94789 * 3 2 1 32 32 H 0.96999 * 120.00043 * 0.02562 * 7 5 4 33 33 H 1.09003 * 113.61311 * 203.66103 * 10 8 7 34 34 H 1.08996 * 113.61871 * 334.56655 * 10 8 7 35 35 H 1.09001 * 109.47155 * 207.49713 * 13 11 10 36 36 H 1.09001 * 109.47211 * 327.50278 * 13 11 10 37 37 H 0.97000 * 120.00197 * 359.97438 * 14 13 11 38 38 H 1.08999 * 109.46782 * 59.99983 * 19 18 17 39 39 H 1.08993 * 109.47254 * 180.02562 * 19 18 17 40 40 H 1.08995 * 109.46937 * 299.99999 * 19 18 17 41 41 H 1.08997 * 109.47048 * 60.00032 * 20 18 17 42 42 H 1.09006 * 109.46865 * 179.97438 * 20 18 17 43 43 H 1.08997 * 109.47228 * 299.99696 * 20 18 17 44 44 H 1.08995 * 109.47150 * 59.99920 * 21 18 17 45 45 H 1.08999 * 109.47478 * 180.02562 * 21 18 17 46 46 H 1.08997 * 109.47187 * 300.00126 * 21 18 17 47 47 H 1.09006 * 113.61290 * 220.01878 * 22 11 10 48 48 H 1.08998 * 113.69354 * 89.13375 * 22 11 10 49 49 H 1.08003 * 126.83256 * 179.74026 * 23 4 3 50 50 H 1.09003 * 109.47464 * 270.36126 * 25 24 23 51 51 H 0.96704 * 114.00472 * 180.02562 * 26 25 24 52 52 H 1.48509 * 109.99633 * 298.67591 * 27 25 24 53 53 H 1.48492 * 110.00297 * 59.99570 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7176 0.0006 5 6 4.7284 1.5957 0.0003 6 8 5.8447 1.1127 0.0054 7 7 4.5734 2.9345 -0.0002 8 6 5.7495 3.8080 0.0001 9 1 6.6371 3.3227 0.4059 10 6 5.9918 4.5152 -1.3438 11 6 5.0869 5.6444 -0.8232 12 9 3.7313 5.4546 -1.1122 13 6 5.5832 7.0449 -1.1879 14 7 5.0584 7.4219 -2.5027 15 6 5.3668 8.6223 -3.0325 16 8 6.0798 9.3919 -2.4194 17 8 4.8842 8.9689 -4.2406 18 6 5.2570 10.2770 -4.7488 19 6 6.7795 10.3601 -4.8751 20 6 4.6193 10.4909 -6.1231 21 6 4.7655 11.3580 -3.7841 22 6 5.4824 5.2007 0.5951 23 6 3.5375 -0.7492 -0.0054 24 6 2.2448 -1.1198 0.0007 25 6 1.7398 -2.5397 0.0004 26 8 0.4804 -2.5975 0.6732 27 14 2.9643 -3.6344 0.8796 28 1 -0.3632 -0.0006 -1.0278 29 1 -0.3634 -0.8897 0.5142 30 1 -0.3633 0.8902 0.5133 31 1 1.8768 2.1240 -0.0008 32 1 3.6832 3.3197 0.0001 33 1 7.0270 4.8205 -1.4961 34 1 5.5765 3.9820 -2.1990 35 1 5.2375 7.7590 -0.4404 36 1 6.6728 7.0482 -1.2171 37 1 4.4896 6.8074 -2.9923 38 1 7.1296 9.5899 -5.5624 39 1 7.0594 11.3421 -5.2562 40 1 7.2341 10.2075 -3.8963 41 1 3.5346 10.4315 -6.0336 42 1 4.8988 11.4731 -6.5045 43 1 4.9698 9.7207 -6.8102 44 1 5.2201 11.2055 -2.8053 45 1 5.0450 12.3400 -4.1659 46 1 3.6809 11.2988 -3.6942 47 1 4.6557 5.2208 1.3053 48 1 6.3781 5.6927 0.9742 49 1 4.3981 -1.4018 -0.0106 50 1 1.6187 -2.8821 -1.0273 51 1 0.0952 -3.4836 0.7116 52 1 4.2693 -3.6079 0.1712 53 1 3.1383 -3.1780 2.2819 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_13287730.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:05:10 Heat of formation + Delta-G solvation = -114.770281 kcal Electronic energy + Delta-G solvation = -35899.798091 eV Core-core repulsion = 30882.808190 eV Total energy + Delta-G solvation = -5016.989901 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.56 seconds Orbital eigenvalues (eV) -48.96155 -42.57109 -41.85362 -40.82799 -39.16493 -38.33624 -37.70807 -36.03311 -35.01976 -34.30610 -33.72757 -31.60247 -29.27604 -28.39417 -28.33145 -27.61580 -27.10224 -26.31289 -24.63887 -23.61482 -22.82859 -21.36771 -21.29176 -20.71454 -20.45648 -19.36398 -18.64106 -18.35091 -17.86385 -17.46593 -17.43357 -17.05082 -16.79334 -16.73438 -16.49090 -16.43291 -15.91622 -15.75272 -15.54615 -15.48806 -15.43646 -15.15752 -15.02070 -14.73493 -14.62445 -14.45389 -13.96447 -13.78202 -13.63600 -13.40513 -13.37138 -13.36312 -13.17469 -13.12523 -13.07393 -12.94710 -12.90210 -12.76006 -12.65736 -12.50549 -12.38357 -11.98283 -11.65644 -11.44001 -11.39731 -11.21937 -11.17388 -10.64353 -10.36677 -10.25845 -9.73648 -9.32272 -5.03803 0.56919 0.90544 1.05968 1.35060 1.64298 1.67623 1.85755 2.05298 2.08559 2.35281 2.89160 2.97387 3.11557 3.14710 3.20815 3.57397 3.58672 3.63372 3.71016 3.76454 3.76907 3.83578 3.91360 4.20409 4.27964 4.30009 4.34293 4.40268 4.47359 4.48271 4.54898 4.58825 4.58892 4.62040 4.68689 4.71808 4.73867 4.76826 4.80572 4.84163 4.84786 4.85083 4.92039 5.02014 5.03088 5.16586 5.24475 5.30362 5.42721 5.49512 5.51720 5.83440 6.11477 6.24583 6.46388 6.82654 7.16863 7.23243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.420 5.420 3 C 0.074 3.926 4 C -0.263 4.263 5 C 0.593 3.407 6 O -0.593 6.593 7 N -0.699 5.699 8 C 0.110 3.890 9 H 0.100 0.900 10 C -0.163 4.163 11 C 0.088 3.912 12 F -0.190 7.190 13 C 0.131 3.869 14 N -0.702 5.702 15 C 0.646 3.354 16 O -0.590 6.590 17 O -0.370 6.370 18 C 0.126 3.874 19 C -0.180 4.180 20 C -0.138 4.138 21 C -0.180 4.180 22 C -0.139 4.139 23 C -0.185 4.185 24 C 0.022 3.978 25 C -0.041 4.041 26 O -0.556 6.556 27 Si 0.802 3.198 28 H 0.085 0.915 29 H 0.119 0.881 30 H 0.101 0.899 31 H 0.210 0.790 32 H 0.412 0.588 33 H 0.128 0.872 34 H 0.076 0.924 35 H 0.085 0.915 36 H 0.102 0.898 37 H 0.415 0.585 38 H 0.061 0.939 39 H 0.087 0.913 40 H 0.065 0.935 41 H 0.069 0.931 42 H 0.099 0.901 43 H 0.068 0.932 44 H 0.064 0.936 45 H 0.088 0.912 46 H 0.061 0.939 47 H 0.100 0.900 48 H 0.142 0.858 49 H 0.128 0.872 50 H 0.105 0.895 51 H 0.410 0.590 52 H -0.301 1.301 53 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.307 -1.664 -1.466 8.598 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 N -0.093 5.093 3 C -0.064 4.064 4 C -0.273 4.273 5 C 0.383 3.617 6 O -0.474 6.474 7 N -0.351 5.351 8 C 0.005 3.995 9 H 0.118 0.882 10 C -0.201 4.201 11 C 0.070 3.930 12 F -0.171 7.171 13 C 0.009 3.991 14 N -0.363 5.363 15 C 0.400 3.600 16 O -0.481 6.481 17 O -0.285 6.285 18 C 0.090 3.910 19 C -0.237 4.237 20 C -0.195 4.195 21 C -0.237 4.237 22 C -0.178 4.178 23 C -0.210 4.210 24 C -0.088 4.088 25 C -0.151 4.151 26 O -0.368 6.368 27 Si 0.709 3.291 28 H 0.104 0.896 29 H 0.137 0.863 30 H 0.119 0.881 31 H 0.226 0.774 32 H 0.249 0.751 33 H 0.146 0.854 34 H 0.095 0.905 35 H 0.103 0.897 36 H 0.120 0.880 37 H 0.251 0.749 38 H 0.080 0.920 39 H 0.106 0.894 40 H 0.084 0.916 41 H 0.088 0.912 42 H 0.118 0.882 43 H 0.088 0.912 44 H 0.083 0.917 45 H 0.106 0.894 46 H 0.080 0.920 47 H 0.119 0.881 48 H 0.160 0.840 49 H 0.145 0.855 50 H 0.123 0.877 51 H 0.264 0.736 52 H -0.229 1.229 53 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -6.771 -1.022 -0.757 6.889 hybrid contribution -0.313 0.446 -0.451 0.707 sum -7.083 -0.576 -1.209 7.209 Atomic orbital electron populations 1.22769 0.73773 1.07292 1.05020 1.43806 1.08575 1.04215 1.52709 1.22436 0.88922 0.93395 1.01664 1.20289 0.92684 0.93344 1.20987 1.17591 0.87627 0.82158 0.74304 1.90745 1.27624 1.76180 1.52897 1.45403 1.10100 1.04512 1.75035 1.21895 0.89811 0.90642 0.97187 0.88200 1.24206 1.02010 0.95453 0.98471 1.22176 0.77407 0.94268 0.99183 1.92839 1.33729 1.96075 1.94416 1.21896 1.00640 0.93915 0.82673 1.44535 1.54715 1.15866 1.21153 1.18239 0.78699 0.82753 0.80353 1.90915 1.41880 1.52024 1.63263 1.86315 1.70277 1.39277 1.32620 1.22388 0.95745 0.77931 0.94934 1.22474 0.94074 1.03798 1.03367 1.21898 1.01540 1.03901 0.92176 1.22473 1.01642 0.99031 1.00556 1.23970 1.05794 0.93462 0.94534 1.21626 0.95266 0.94166 1.09911 1.20176 0.89756 0.89120 1.09790 1.24331 0.94342 0.93476 1.02955 1.86243 1.33797 1.37613 1.79155 0.94890 0.75749 0.83691 0.74749 0.89605 0.86343 0.88055 0.77360 0.75063 0.85423 0.90511 0.89704 0.88030 0.74888 0.91987 0.89382 0.91625 0.91234 0.88196 0.91250 0.91662 0.89359 0.91998 0.88135 0.83970 0.85470 0.87734 0.73596 1.22939 1.23958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.29 10.71 127.77 1.37 1.08 16 2 N -0.42 -0.68 3.09 -533.24 -1.65 -2.32 16 3 C 0.07 0.11 10.83 83.92 0.91 1.02 16 4 C -0.26 -2.44 6.29 -19.04 -0.12 -2.56 16 5 C 0.59 6.67 7.81 86.62 0.68 7.35 16 6 O -0.59 -12.03 16.57 -4.13 -0.07 -12.10 16 7 N -0.70 -1.71 5.17 -443.45 -2.29 -4.00 16 8 C 0.11 -0.01 4.33 45.52 0.20 0.18 16 9 H 0.10 0.37 7.46 -2.39 -0.02 0.35 16 10 C -0.16 0.44 7.32 31.12 0.23 0.67 16 11 C 0.09 -0.40 1.73 -10.27 -0.02 -0.42 16 12 F -0.19 0.38 15.50 44.97 0.70 1.07 16 13 C 0.13 -0.37 5.43 86.38 0.47 0.10 16 14 N -0.70 -0.62 5.45 -590.86 -3.22 -3.84 16 15 C 0.65 4.30 8.06 129.79 1.05 5.35 16 16 O -0.59 -6.58 11.88 19.80 0.24 -6.35 16 17 O -0.37 -2.21 9.94 -55.41 -0.55 -2.76 16 18 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 19 C -0.18 -0.56 8.37 71.98 0.60 0.04 16 20 C -0.14 0.24 8.85 71.99 0.64 0.88 16 21 C -0.18 -0.56 8.37 71.98 0.60 0.04 16 22 C -0.14 0.89 7.28 31.12 0.23 1.12 16 23 C -0.19 -2.13 9.50 23.62 0.22 -1.91 16 24 C 0.02 0.12 6.16 40.98 0.25 0.37 16 25 C -0.04 0.09 2.97 71.24 0.21 0.30 16 26 O -0.56 3.45 9.69 -148.98 -1.44 2.00 16 27 Si 0.80 -0.41 31.24 68.60 2.14 1.73 16 28 H 0.09 -0.66 8.14 -2.38 -0.02 -0.68 16 29 H 0.12 -0.61 5.13 -2.39 -0.01 -0.62 16 30 H 0.10 -0.96 8.13 -2.39 -0.02 -0.98 16 31 H 0.21 -1.51 7.45 -2.91 -0.02 -1.54 16 32 H 0.41 -1.05 6.72 -92.71 -0.62 -1.67 16 33 H 0.13 -0.70 7.90 -2.39 -0.02 -0.72 16 34 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.08 -0.19 8.14 -2.39 -0.02 -0.21 16 36 H 0.10 -0.40 7.84 -2.39 -0.02 -0.42 16 37 H 0.41 -0.53 8.14 -92.71 -0.75 -1.28 16 38 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 39 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 40 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 41 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 42 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 43 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 44 H 0.06 0.53 5.88 -2.39 -0.01 0.52 16 45 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 46 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 47 H 0.10 -0.72 8.14 -2.38 -0.02 -0.74 16 48 H 0.14 -1.48 8.10 -2.39 -0.02 -1.50 16 49 H 0.13 1.86 6.76 -2.91 -0.02 1.84 16 50 H 0.11 -0.67 7.96 -2.39 -0.02 -0.69 16 51 H 0.41 -6.79 8.74 -74.05 -0.65 -7.44 16 52 H -0.30 -2.26 6.89 99.48 0.69 -1.57 16 53 H -0.31 -2.87 7.11 99.48 0.71 -2.16 16 Total: 0.00 -32.55 429.31 0.31 -32.24 By element: Atomic # 1 Polarization: -18.62 SS G_CDS: -1.04 Total: -19.66 kcal Atomic # 6 Polarization: 6.49 SS G_CDS: 7.50 Total: 13.99 kcal Atomic # 7 Polarization: -3.00 SS G_CDS: -7.16 Total: -10.17 kcal Atomic # 8 Polarization: -17.38 SS G_CDS: -1.83 Total: -19.21 kcal Atomic # 9 Polarization: 0.38 SS G_CDS: 0.70 Total: 1.07 kcal Atomic # 14 Polarization: -0.41 SS G_CDS: 2.14 Total: 1.73 kcal Total: -32.55 0.31 -32.24 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_13287730.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.532 kcal (2) G-P(sol) polarization free energy of solvation -32.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.081 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds