Wall clock time and date at job start Thu Mar 4 2021 16:05:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47259 * 2 1 4 4 C 1.53005 * 109.46972 * 240.00489 * 2 1 3 5 5 O 1.45193 * 109.47585 * 120.00448 * 2 1 3 6 6 C 1.34632 * 117.00120 * 59.99613 * 5 2 1 7 7 O 1.21511 * 120.00266 * 0.02562 * 6 5 2 8 8 N 1.34780 * 119.99957 * 180.02562 * 6 5 2 9 9 C 1.46501 * 119.99921 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.47427 * 180.02562 * 9 8 6 11 11 F 1.39908 * 112.84667 * 316.19785 * 10 9 8 12 12 C 1.53780 * 113.61731 * 87.49755 * 10 9 8 13 13 C 1.53776 * 87.08385 * 139.98351 * 12 10 9 14 14 H 1.08994 * 113.69324 * 220.01076 * 13 12 10 15 15 N 1.46502 * 113.61372 * 89.11478 * 13 12 10 16 16 C 1.34773 * 119.99860 * 107.50266 * 15 13 12 17 17 O 1.21599 * 119.99913 * 0.02562 * 16 15 13 18 18 C 1.47536 * 120.00250 * 179.97438 * 16 15 13 19 19 C 1.40143 * 120.19274 * 179.97438 * 18 16 15 20 20 O 1.35655 * 120.14823 * 0.02562 * 19 18 16 21 21 C 1.38704 * 119.69803 * 180.02562 * 19 18 16 22 22 C 1.38053 * 120.08455 * 0.02562 * 21 19 18 23 23 C 1.50706 * 119.80070 * 180.02562 * 22 21 19 24 24 O 1.42897 * 109.46999 * 299.99347 * 23 22 21 25 25 Si 1.86303 * 109.46654 * 180.02562 * 23 22 21 26 26 C 1.38548 * 120.39153 * 359.74441 * 22 21 19 27 27 C 1.37782 * 120.30001 * 0.51341 * 26 22 21 28 28 C 1.53777 * 113.61964 * 185.00101 * 10 9 8 29 29 H 1.08998 * 109.46969 * 299.99683 * 1 2 3 30 30 H 1.08994 * 109.47434 * 59.99786 * 1 2 3 31 31 H 1.08998 * 109.46962 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47518 * 180.02562 * 3 2 1 33 33 H 1.09009 * 109.47176 * 300.00815 * 3 2 1 34 34 H 1.08998 * 109.46871 * 60.00257 * 3 2 1 35 35 H 1.08998 * 109.46925 * 299.99591 * 4 2 1 36 36 H 1.08994 * 109.47266 * 59.99622 * 4 2 1 37 37 H 1.09006 * 109.46853 * 179.97438 * 4 2 1 38 38 H 0.96995 * 120.00187 * 359.97438 * 8 6 5 39 39 H 1.09001 * 109.47509 * 60.00046 * 9 8 6 40 40 H 1.08996 * 109.46840 * 300.00025 * 9 8 6 41 41 H 1.09003 * 113.61123 * 25.43771 * 12 10 9 42 42 H 1.08996 * 113.61471 * 254.53736 * 12 10 9 43 43 H 0.96999 * 120.00477 * 287.51072 * 15 13 12 44 44 H 0.96695 * 114.00127 * 89.99520 * 20 19 18 45 45 H 1.07997 * 119.95643 * 179.97438 * 21 19 18 46 46 H 1.08996 * 109.47716 * 59.99973 * 23 22 21 47 47 H 0.96698 * 114.00406 * 180.02562 * 24 23 22 48 48 H 1.48500 * 110.00422 * 59.99716 * 25 23 22 49 49 H 1.48503 * 109.99683 * 181.31671 * 25 23 22 50 50 H 1.08000 * 119.84791 * 180.25864 * 26 22 21 51 51 H 1.08002 * 120.04937 * 179.77127 * 27 26 22 52 52 H 1.09000 * 113.61850 * 105.46902 * 28 10 9 53 53 H 1.09003 * 113.68817 * 334.57687 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0141 -0.6845 1.1854 6 6 1.6523 -1.9723 1.3382 7 8 0.9516 -2.5097 0.5035 8 7 2.0674 -2.6655 2.4170 9 6 1.6743 -4.0669 2.5829 10 6 2.2733 -4.6146 3.8798 11 9 3.6089 -4.2400 4.0620 12 6 1.3903 -4.3747 5.1158 13 6 1.7805 -5.7904 5.5721 14 1 0.9568 -6.3505 6.0146 15 7 2.9977 -5.8299 6.3864 16 6 2.9153 -6.0685 7.7103 17 8 1.8307 -6.2514 8.2287 18 6 4.1411 -6.1089 8.5303 19 6 4.0600 -6.3561 9.9074 20 8 2.8535 -6.5601 10.4931 21 6 5.2189 -6.3913 10.6687 22 6 6.4459 -6.1830 10.0713 23 6 7.7011 -6.2232 10.9044 24 8 7.6326 -5.2180 11.9177 25 14 9.1794 -5.9068 9.8157 26 6 6.5307 -5.9430 8.7094 27 6 5.3893 -5.8993 7.9388 28 6 2.0210 -6.1171 4.0887 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 -0.0005 33 1 1.6766 1.9564 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7488 -1.2494 36 1 1.6766 -0.2073 -2.1392 37 1 3.1300 -0.7208 -1.2496 38 1 2.6271 -2.2366 3.0831 39 1 2.0414 -4.6498 1.7382 40 1 0.5874 -4.1365 2.6273 41 1 0.3311 -4.2678 4.8816 42 1 1.7615 -3.5868 5.7712 43 1 3.8629 -5.6843 5.9728 44 1 2.5768 -7.4864 10.5114 45 1 5.1612 -6.5811 11.7303 46 1 7.7963 -7.2036 11.3711 47 1 8.4092 -5.1857 12.4929 48 1 9.0614 -4.5728 9.1740 49 1 10.4261 -5.9752 10.6196 50 1 7.4955 -5.7854 8.2504 51 1 5.4598 -5.7083 6.8782 52 1 2.9013 -6.7360 3.9151 53 1 1.1346 -6.4880 3.5740 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_13422076.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:05:40 Heat of formation + Delta-G solvation = -177.652771 kcal Electronic energy + Delta-G solvation = -37570.537083 eV Core-core repulsion = 32324.875590 eV Total energy + Delta-G solvation = -5245.661493 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.183 amu Computer time = 1.59 seconds Orbital eigenvalues (eV) -48.92946 -41.84567 -41.70701 -40.39395 -39.13052 -38.48527 -38.20433 -37.31624 -36.00871 -35.01415 -34.33956 -32.63748 -31.12769 -29.26305 -28.38310 -28.32397 -27.49732 -27.06385 -24.56231 -23.86276 -23.40836 -22.80134 -21.76986 -21.32573 -20.62362 -19.40876 -19.32390 -18.76437 -18.55403 -17.83170 -17.62231 -17.43254 -17.04192 -16.95685 -16.62607 -16.56741 -16.38974 -16.13335 -15.87663 -15.66489 -15.61671 -15.46074 -15.32642 -15.10415 -14.62273 -14.58794 -14.43743 -14.08895 -13.98327 -13.85319 -13.61431 -13.38776 -13.34522 -13.13968 -13.09291 -13.03825 -12.93621 -12.89312 -12.72166 -12.49386 -12.44630 -12.37198 -12.17311 -11.67910 -11.61728 -11.42707 -11.36491 -11.16643 -10.95402 -10.62703 -10.34594 -10.24896 -10.01006 -9.78803 -4.92304 -0.43704 0.13776 1.07935 1.26197 1.61964 1.66514 1.69171 1.95451 1.96964 2.52915 2.91966 3.00415 3.07657 3.14927 3.23723 3.28902 3.51604 3.60538 3.65942 3.71952 3.72719 3.77446 3.78800 3.92287 4.09125 4.25691 4.31805 4.33108 4.36678 4.49944 4.56622 4.58805 4.59836 4.62408 4.69951 4.73940 4.74828 4.75422 4.81505 4.84225 4.85629 4.89295 4.92329 5.00314 5.04550 5.11800 5.17721 5.24993 5.25442 5.31474 5.48106 5.52945 5.57857 6.26057 6.40072 6.54372 6.72084 7.10788 7.24774 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.703 5.703 9 C 0.130 3.870 10 C 0.085 3.915 11 F -0.191 7.191 12 C -0.165 4.165 13 C 0.113 3.887 14 H 0.106 0.894 15 N -0.700 5.700 16 C 0.561 3.439 17 O -0.558 6.558 18 C -0.183 4.183 19 C 0.156 3.844 20 O -0.497 6.497 21 C -0.141 4.141 22 C -0.035 4.035 23 C -0.096 4.096 24 O -0.560 6.560 25 Si 0.775 3.225 26 C -0.134 4.134 27 C -0.053 4.053 28 C -0.138 4.138 29 H 0.061 0.939 30 H 0.087 0.913 31 H 0.065 0.935 32 H 0.068 0.932 33 H 0.099 0.901 34 H 0.068 0.932 35 H 0.065 0.935 36 H 0.087 0.913 37 H 0.061 0.939 38 H 0.414 0.586 39 H 0.085 0.915 40 H 0.101 0.899 41 H 0.127 0.873 42 H 0.074 0.926 43 H 0.412 0.588 44 H 0.409 0.591 45 H 0.136 0.864 46 H 0.103 0.897 47 H 0.398 0.602 48 H -0.294 1.294 49 H -0.288 1.288 50 H 0.160 0.840 51 H 0.164 0.836 52 H 0.103 0.897 53 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.202 -3.495 -3.093 6.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.399 3.601 7 O -0.481 6.481 8 N -0.363 5.363 9 C 0.008 3.992 10 C 0.067 3.933 11 F -0.171 7.171 12 C -0.204 4.204 13 C 0.008 3.992 14 H 0.124 0.876 15 N -0.353 5.353 16 C 0.350 3.650 17 O -0.437 6.437 18 C -0.187 4.187 19 C 0.110 3.890 20 O -0.310 6.310 21 C -0.159 4.159 22 C -0.035 4.035 23 C -0.204 4.204 24 O -0.370 6.370 25 Si 0.680 3.320 26 C -0.151 4.151 27 C -0.072 4.072 28 C -0.176 4.176 29 H 0.080 0.920 30 H 0.106 0.894 31 H 0.084 0.916 32 H 0.088 0.912 33 H 0.118 0.882 34 H 0.087 0.913 35 H 0.084 0.916 36 H 0.106 0.894 37 H 0.080 0.920 38 H 0.251 0.749 39 H 0.103 0.897 40 H 0.119 0.881 41 H 0.145 0.855 42 H 0.093 0.907 43 H 0.251 0.749 44 H 0.269 0.731 45 H 0.154 0.846 46 H 0.121 0.879 47 H 0.248 0.752 48 H -0.221 1.221 49 H -0.215 1.215 50 H 0.177 0.823 51 H 0.182 0.818 52 H 0.122 0.878 53 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 4.214 -2.614 -3.546 6.097 hybrid contribution 0.625 0.410 1.589 1.755 sum 4.839 -2.205 -1.958 5.666 Atomic orbital electron populations 1.22474 0.93884 1.03822 1.03527 1.22378 0.94575 0.92533 0.81484 1.21900 1.02437 0.90983 1.04242 1.22475 1.01621 1.02321 0.97275 1.86315 1.71540 1.23311 1.47401 1.18245 0.78723 0.80820 0.82276 1.90913 1.42130 1.70945 1.44072 1.44551 1.55541 1.12704 1.23511 1.21919 1.01551 0.78958 0.96796 1.22229 0.77981 0.98151 0.94988 1.92845 1.35559 1.92525 1.96177 1.24222 1.02118 0.98408 0.95682 1.21898 0.88451 0.97281 0.91618 0.87584 1.45556 1.10560 1.72131 1.07007 1.18235 0.88413 0.76024 0.82328 1.90810 1.30029 1.50242 1.72630 1.20430 0.94302 1.10260 0.93658 1.18698 0.85381 0.95750 0.89203 1.84721 1.32965 1.33517 1.79810 1.21348 0.90910 1.02708 1.00978 1.19628 0.93877 0.95996 0.94011 1.25214 1.03911 0.95184 0.96100 1.86550 1.46991 1.57006 1.46454 0.94122 0.72181 0.83907 0.81829 1.21169 0.99757 1.01402 0.92748 1.21434 0.89697 0.94725 1.01319 1.23969 1.06687 0.93053 0.93897 0.92030 0.89398 0.91560 0.91249 0.88204 0.91303 0.91597 0.89382 0.91997 0.74928 0.89663 0.88080 0.85471 0.90749 0.74907 0.73108 0.84565 0.87921 0.75154 1.22121 1.21506 0.82262 0.81812 0.87801 0.83940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 2 C 0.13 0.37 1.13 -10.79 -0.01 0.36 16 3 C -0.14 0.24 8.85 71.98 0.64 0.88 16 4 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 5 O -0.37 -2.14 9.94 -55.41 -0.55 -2.70 16 6 C 0.65 4.01 8.06 129.79 1.05 5.06 16 7 O -0.59 -6.25 11.88 19.81 0.24 -6.01 16 8 N -0.70 -0.18 5.45 -590.85 -3.22 -3.41 16 9 C 0.13 -0.51 5.43 86.38 0.47 -0.04 16 10 C 0.09 -0.52 1.73 -10.27 -0.02 -0.54 16 11 F -0.19 0.63 15.50 44.97 0.70 1.33 16 12 C -0.17 0.76 7.32 31.12 0.23 0.98 16 13 C 0.11 -0.40 4.33 45.52 0.20 -0.20 16 14 H 0.11 -0.07 7.46 -2.39 -0.02 -0.08 16 15 N -0.70 1.08 5.13 -443.20 -2.28 -1.19 16 16 C 0.56 3.10 7.76 86.70 0.67 3.77 16 17 O -0.56 -7.34 14.76 16.89 0.25 -7.09 16 18 C -0.18 -0.64 5.89 -20.01 -0.12 -0.76 16 19 C 0.16 0.94 6.72 22.84 0.15 1.09 16 20 O -0.50 -4.05 11.58 -68.79 -0.80 -4.85 16 21 C -0.14 -0.52 9.53 22.34 0.21 -0.31 16 22 C -0.03 -0.01 5.43 -19.83 -0.11 -0.12 16 23 C -0.10 0.28 2.81 71.24 0.20 0.48 16 24 O -0.56 -0.58 12.74 -148.98 -1.90 -2.48 16 25 Si 0.78 -3.96 29.77 68.60 2.04 -1.92 16 26 C -0.13 0.39 8.64 22.24 0.19 0.58 16 27 C -0.05 0.14 9.54 22.52 0.21 0.36 16 28 C -0.14 1.26 7.28 31.12 0.23 1.48 16 29 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 30 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 31 H 0.07 0.51 5.88 -2.39 -0.01 0.49 16 32 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 33 H 0.10 -0.52 8.14 -2.38 -0.02 -0.54 16 34 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 35 H 0.07 0.51 5.88 -2.39 -0.01 0.49 16 36 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 37 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 38 H 0.41 -0.71 8.14 -92.71 -0.75 -1.47 16 39 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.10 -0.51 7.84 -2.39 -0.02 -0.53 16 41 H 0.13 -0.90 7.90 -2.39 -0.02 -0.92 16 42 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 43 H 0.41 -2.41 5.81 -92.71 -0.54 -2.95 16 44 H 0.41 0.11 9.06 -74.06 -0.67 -0.56 16 45 H 0.14 0.45 8.06 -2.91 -0.02 0.42 16 46 H 0.10 -0.73 7.96 -2.39 -0.02 -0.75 16 47 H 0.40 -2.81 8.74 -74.06 -0.65 -3.46 16 48 H -0.29 -0.55 7.11 99.48 0.71 0.16 16 49 H -0.29 0.10 7.11 99.48 0.71 0.81 16 50 H 0.16 -1.30 4.85 -2.91 -0.01 -1.31 16 51 H 0.16 -1.54 6.40 -2.91 -0.02 -1.56 16 52 H 0.10 -1.07 8.14 -2.39 -0.02 -1.08 16 53 H 0.14 -1.85 8.10 -2.39 -0.02 -1.87 16 Total: 0.00 -28.67 431.64 -1.69 -30.36 By element: Atomic # 1 Polarization: -13.72 SS G_CDS: -1.57 Total: -15.29 kcal Atomic # 6 Polarization: 7.84 SS G_CDS: 5.40 Total: 13.24 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -5.50 Total: -4.60 kcal Atomic # 8 Polarization: -20.37 SS G_CDS: -2.76 Total: -23.13 kcal Atomic # 9 Polarization: 0.63 SS G_CDS: 0.70 Total: 1.33 kcal Atomic # 14 Polarization: -3.96 SS G_CDS: 2.04 Total: -1.92 kcal Total: -28.67 -1.69 -30.36 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_13422076.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.289 kcal (2) G-P(sol) polarization free energy of solvation -28.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.690 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.364 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.653 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.59 seconds