Wall clock time and date at job start Thu Mar 4 2021 16:06:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52998 * 109.47186 * 2 1 4 4 C 1.53010 * 109.47257 * 240.00339 * 2 1 3 5 5 O 1.45198 * 109.47101 * 120.00412 * 2 1 3 6 6 C 1.34638 * 117.00202 * 59.99922 * 5 2 1 7 7 O 1.21514 * 119.99842 * 0.02562 * 6 5 2 8 8 N 1.34776 * 119.99998 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99962 * 179.97438 * 8 6 5 10 10 C 1.53000 * 109.47421 * 180.02562 * 9 8 6 11 11 F 1.39907 * 112.84694 * 316.19812 * 10 9 8 12 12 C 1.53774 * 113.61504 * 87.50137 * 10 9 8 13 13 C 1.53781 * 87.08342 * 139.98446 * 12 10 9 14 14 H 1.08991 * 113.69062 * 220.00943 * 13 12 10 15 15 N 1.46506 * 113.61146 * 89.11436 * 13 12 10 16 16 C 1.34777 * 119.99656 * 107.50864 * 15 13 12 17 17 O 1.21617 * 119.99808 * 359.97438 * 16 15 13 18 18 C 1.47376 * 120.00021 * 179.97438 * 16 15 13 19 19 C 1.36414 * 127.19112 * 0.02587 * 18 16 15 20 20 O 1.33654 * 108.39828 * 179.97438 * 19 18 16 21 21 C 1.34213 * 110.90483 * 0.02562 * 20 19 18 22 22 C 1.50700 * 125.43545 * 180.02562 * 21 20 19 23 23 O 1.42899 * 109.47251 * 244.97891 * 22 21 20 24 24 Si 1.86303 * 109.47240 * 4.97281 * 22 21 20 25 25 C 1.34176 * 109.12656 * 359.97438 * 21 20 19 26 26 C 1.53774 * 113.61852 * 185.00087 * 10 9 8 27 27 H 1.08994 * 109.47652 * 299.99621 * 1 2 3 28 28 H 1.08999 * 109.47086 * 59.99714 * 1 2 3 29 29 H 1.09003 * 109.47176 * 179.97438 * 1 2 3 30 30 H 1.08995 * 109.47084 * 179.97438 * 3 2 1 31 31 H 1.08999 * 109.47342 * 300.00130 * 3 2 1 32 32 H 1.09004 * 109.46893 * 60.00051 * 3 2 1 33 33 H 1.08993 * 109.46724 * 299.99772 * 4 2 1 34 34 H 1.08999 * 109.47115 * 59.99965 * 4 2 1 35 35 H 1.08995 * 109.47038 * 180.02562 * 4 2 1 36 36 H 0.96999 * 119.99839 * 0.02562 * 8 6 5 37 37 H 1.09008 * 109.47148 * 60.00025 * 9 8 6 38 38 H 1.09002 * 109.47278 * 300.00127 * 9 8 6 39 39 H 1.09001 * 113.61568 * 25.43495 * 12 10 9 40 40 H 1.09005 * 113.61688 * 254.53063 * 12 10 9 41 41 H 0.96998 * 120.00137 * 287.50210 * 15 13 12 42 42 H 1.08007 * 125.80379 * 0.22894 * 19 18 16 43 43 H 1.08994 * 109.47390 * 124.97585 * 22 21 20 44 44 H 0.96701 * 114.00555 * 59.98872 * 23 22 21 45 45 H 1.48501 * 110.00157 * 58.67902 * 24 22 21 46 46 H 1.48496 * 110.00458 * 180.02562 * 24 22 21 47 47 H 1.07998 * 127.01822 * 180.02562 * 25 21 20 48 48 H 1.09004 * 113.61600 * 105.46730 * 26 10 9 49 49 H 1.08998 * 113.68949 * 334.57817 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9516 -2.5097 0.5034 8 7 2.0672 -2.6655 2.4170 9 6 1.6731 -4.0667 2.5835 10 6 2.2722 -4.6144 3.8803 11 9 3.6082 -4.2407 4.0619 12 6 1.3898 -4.3735 5.1165 13 6 1.7792 -5.7895 5.5730 14 1 0.9554 -6.3489 6.0159 15 7 2.9967 -5.8295 6.3870 16 6 2.9146 -6.0678 7.7110 17 8 1.8297 -6.2491 8.2300 18 6 4.1393 -6.1086 8.5298 19 6 5.4223 -5.9265 8.1038 20 8 6.2369 -6.0422 9.1572 21 6 5.5401 -6.2967 10.2757 22 6 6.1310 -6.4867 11.6489 23 8 5.8972 -7.8267 12.0869 24 14 7.9650 -6.1653 11.5858 25 6 4.2335 -6.3538 9.9762 26 6 2.0190 -6.1166 4.0897 27 1 -0.3634 0.5137 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 3.1299 1.4425 0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6766 1.9563 0.8900 33 1 1.6767 -1.7488 -1.2493 34 1 1.6767 -0.2073 -2.1393 35 1 3.1300 -0.7216 -1.2491 36 1 2.6262 -2.2364 3.0836 37 1 2.0396 -4.6500 1.7387 38 1 0.5862 -4.1355 2.6283 39 1 0.3306 -4.2660 4.8826 40 1 1.7618 -3.5858 5.7717 41 1 3.8619 -5.6846 5.9730 42 1 5.7278 -5.7195 7.0888 43 1 5.6638 -5.7902 12.3451 44 1 6.2854 -8.5015 11.5133 45 1 8.2225 -4.7854 11.1013 46 1 8.5598 -6.3500 12.9339 47 1 3.4176 -6.5415 10.6586 48 1 2.8988 -6.7362 3.9158 49 1 1.1322 -6.4871 3.5755 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_13456056.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:06:07 Heat of formation + Delta-G solvation = -148.363013 kcal Electronic energy + Delta-G solvation = -33695.530239 eV Core-core repulsion = 28734.902605 eV Total energy + Delta-G solvation = -4960.627634 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.167 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -48.93721 -43.74283 -41.83938 -40.97801 -39.21602 -38.33617 -38.00499 -36.02722 -35.03872 -34.48796 -33.66054 -31.75711 -29.22319 -28.38462 -28.32352 -27.08388 -26.74786 -25.45113 -23.90157 -22.83930 -22.34334 -21.37075 -21.13991 -20.64091 -19.37278 -19.31801 -17.90811 -17.80836 -17.57792 -17.48957 -17.42948 -17.09629 -16.80994 -16.67589 -16.47638 -16.09068 -15.93393 -15.70043 -15.59146 -15.46155 -15.15334 -14.83393 -14.62132 -14.44258 -14.25932 -14.05236 -13.91993 -13.67604 -13.52258 -13.38635 -13.14360 -13.08551 -12.93810 -12.89223 -12.82960 -12.74718 -12.49575 -12.37325 -12.22889 -11.64182 -11.42893 -11.38593 -11.31331 -11.16588 -10.98798 -10.63600 -10.35060 -10.24593 -9.82035 -4.98556 0.22254 0.79310 1.07667 1.17269 1.50037 1.69156 1.80013 1.91249 1.95947 2.17891 2.91007 2.98850 3.14247 3.22745 3.29062 3.44586 3.57489 3.59687 3.63316 3.71900 3.77370 3.92259 3.94307 4.25369 4.31717 4.34446 4.37515 4.48347 4.49816 4.56445 4.59739 4.61397 4.70077 4.74287 4.74754 4.80780 4.84053 4.85610 4.86310 4.88093 4.91379 5.03752 5.10411 5.17687 5.25336 5.31371 5.44875 5.52886 5.81073 6.26220 6.38136 6.62456 7.07072 7.24874 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.702 5.702 9 C 0.130 3.870 10 C 0.087 3.913 11 F -0.189 7.189 12 C -0.164 4.164 13 C 0.112 3.888 14 H 0.103 0.897 15 N -0.696 5.696 16 C 0.591 3.409 17 O -0.581 6.581 18 C -0.270 4.270 19 C 0.066 3.934 20 O -0.162 6.162 21 C -0.052 4.052 22 C -0.036 4.036 23 O -0.545 6.545 24 Si 0.798 3.202 25 C -0.151 4.151 26 C -0.138 4.138 27 H 0.061 0.939 28 H 0.087 0.913 29 H 0.065 0.935 30 H 0.069 0.931 31 H 0.099 0.901 32 H 0.068 0.932 33 H 0.065 0.935 34 H 0.087 0.913 35 H 0.061 0.939 36 H 0.415 0.585 37 H 0.085 0.915 38 H 0.101 0.899 39 H 0.127 0.873 40 H 0.077 0.923 41 H 0.414 0.586 42 H 0.259 0.741 43 H 0.130 0.870 44 H 0.400 0.600 45 H -0.289 1.289 46 H -0.284 1.284 47 H 0.145 0.855 48 H 0.104 0.896 49 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.894 -0.300 -4.168 6.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.399 3.601 7 O -0.481 6.481 8 N -0.362 5.362 9 C 0.007 3.993 10 C 0.068 3.932 11 F -0.170 7.170 12 C -0.203 4.203 13 C 0.006 3.994 14 H 0.121 0.879 15 N -0.348 5.348 16 C 0.381 3.619 17 O -0.462 6.462 18 C -0.275 4.275 19 C -0.004 4.004 20 O -0.058 6.058 21 C -0.101 4.101 22 C -0.145 4.145 23 O -0.353 6.353 24 Si 0.701 3.299 25 C -0.171 4.171 26 C -0.177 4.177 27 H 0.080 0.920 28 H 0.106 0.894 29 H 0.084 0.916 30 H 0.088 0.912 31 H 0.118 0.882 32 H 0.087 0.913 33 H 0.084 0.916 34 H 0.106 0.894 35 H 0.080 0.920 36 H 0.251 0.749 37 H 0.103 0.897 38 H 0.119 0.881 39 H 0.145 0.855 40 H 0.096 0.904 41 H 0.252 0.748 42 H 0.275 0.725 43 H 0.148 0.852 44 H 0.251 0.749 45 H -0.216 1.216 46 H -0.211 1.211 47 H 0.163 0.837 48 H 0.122 0.878 49 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 4.471 0.185 -3.487 5.673 hybrid contribution -0.472 0.568 0.313 0.803 sum 3.998 0.753 -3.174 5.160 Atomic orbital electron populations 1.22474 0.93903 1.03808 1.03527 1.22376 0.94558 0.92543 0.81481 1.21897 1.02448 0.90960 1.04242 1.22475 1.01629 1.02309 0.97290 1.86315 1.71535 1.23292 1.47369 1.18254 0.78718 0.80826 0.82294 1.90917 1.42139 1.70956 1.44090 1.44534 1.55563 1.12673 1.23479 1.21917 1.01535 0.79003 0.96820 1.22194 0.78018 0.97987 0.94956 1.92843 1.35420 1.92522 1.96175 1.24214 1.02152 0.98238 0.95663 1.21909 0.88380 0.97490 0.91627 0.87882 1.45425 1.10628 1.72081 1.06657 1.17470 0.87430 0.75053 0.81980 1.90793 1.30603 1.51685 1.73105 1.21464 0.94175 1.16821 0.95015 1.25268 0.86586 0.95769 0.92799 1.83717 1.37997 1.68715 1.15346 1.22792 0.90574 1.07651 0.89049 1.24677 1.14054 0.88355 0.87457 1.86544 1.81030 1.14262 1.53512 0.93178 0.72416 0.82917 0.81348 1.22565 0.96715 1.03626 0.94187 1.23969 1.06698 0.93216 0.93782 0.92001 0.89435 0.91581 0.91227 0.88241 0.91276 0.91623 0.89411 0.91981 0.74866 0.89711 0.88134 0.85516 0.90423 0.74770 0.72516 0.85246 0.74884 1.21558 1.21081 0.83738 0.87759 0.84052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.43 8.37 71.98 0.60 0.17 16 2 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 3 C -0.14 0.33 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.43 8.37 71.99 0.60 0.17 16 5 O -0.37 -1.85 9.94 -55.47 -0.55 -2.41 16 6 C 0.65 3.52 8.06 129.79 1.05 4.57 16 7 O -0.59 -5.92 11.88 19.80 0.24 -5.69 16 8 N -0.70 0.52 5.45 -590.84 -3.22 -2.71 16 9 C 0.13 -0.62 5.43 86.38 0.47 -0.15 16 10 C 0.09 -0.64 1.73 -10.27 -0.02 -0.66 16 11 F -0.19 0.97 15.50 44.97 0.70 1.66 16 12 C -0.16 0.95 7.32 31.12 0.23 1.18 16 13 C 0.11 -0.47 4.32 45.52 0.20 -0.27 16 14 H 0.10 -0.05 7.46 -2.39 -0.02 -0.07 16 15 N -0.70 2.03 5.18 -443.34 -2.29 -0.27 16 16 C 0.59 3.03 7.81 86.65 0.68 3.71 16 17 O -0.58 -8.53 16.58 -4.08 -0.07 -8.59 16 18 C -0.27 -0.61 6.31 -19.00 -0.12 -0.73 16 19 C 0.07 -0.35 11.61 67.39 0.78 0.43 16 20 O -0.16 0.43 8.90 4.47 0.04 0.47 16 21 C -0.05 -0.03 6.18 24.76 0.15 0.12 16 22 C -0.04 0.05 2.97 71.24 0.21 0.26 16 23 O -0.55 0.45 12.88 -148.98 -1.92 -1.47 16 24 Si 0.80 -2.83 32.09 68.60 2.20 -0.63 16 25 C -0.15 -0.75 10.90 23.65 0.26 -0.50 16 26 C -0.14 1.36 7.28 31.12 0.23 1.58 16 27 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 28 H 0.09 -0.09 8.14 -2.39 -0.02 -0.10 16 29 H 0.07 0.48 5.88 -2.39 -0.01 0.46 16 30 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.10 -0.57 8.14 -2.39 -0.02 -0.58 16 32 H 0.07 -0.16 8.14 -2.38 -0.02 -0.18 16 33 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 34 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 35 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 36 H 0.41 -1.24 8.14 -92.71 -0.75 -2.00 16 37 H 0.08 -0.35 8.14 -2.38 -0.02 -0.37 16 38 H 0.10 -0.58 7.84 -2.39 -0.02 -0.59 16 39 H 0.13 -1.02 7.89 -2.39 -0.02 -1.04 16 40 H 0.08 -0.23 8.14 -2.38 -0.02 -0.25 16 41 H 0.41 -3.51 6.75 -92.71 -0.63 -4.14 16 42 H 0.26 -4.05 7.47 -2.91 -0.02 -4.07 16 43 H 0.13 -0.15 7.96 -2.39 -0.02 -0.17 16 44 H 0.40 -3.69 8.70 -74.06 -0.64 -4.34 16 45 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 46 H -0.28 -0.73 7.11 99.48 0.71 -0.02 16 47 H 0.14 1.11 8.06 -2.91 -0.02 1.09 16 48 H 0.10 -1.15 8.14 -2.38 -0.02 -1.17 16 49 H 0.14 -1.88 8.10 -2.39 -0.02 -1.90 16 Total: 0.00 -27.67 410.84 0.09 -27.58 By element: Atomic # 1 Polarization: -18.11 SS G_CDS: -0.97 Total: -19.08 kcal Atomic # 6 Polarization: 5.19 SS G_CDS: 5.94 Total: 11.13 kcal Atomic # 7 Polarization: 2.54 SS G_CDS: -5.52 Total: -2.97 kcal Atomic # 8 Polarization: -15.43 SS G_CDS: -2.26 Total: -17.69 kcal Atomic # 9 Polarization: 0.97 SS G_CDS: 0.70 Total: 1.66 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.20 Total: -0.63 kcal Total: -27.67 0.09 -27.58 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_13456056.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.781 kcal (2) G-P(sol) polarization free energy of solvation -27.670 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds