Wall clock time and date at job start Thu Mar 4 2021 16:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52998 * 109.47528 * 2 1 4 4 C 1.53003 * 109.47004 * 239.99760 * 2 1 3 5 5 O 1.45206 * 109.47039 * 120.00339 * 2 1 3 6 6 C 1.34636 * 117.00189 * 59.99776 * 5 2 1 7 7 O 1.21505 * 119.99814 * 359.97438 * 6 5 2 8 8 N 1.34775 * 119.99839 * 180.02562 * 6 5 2 9 9 C 1.46504 * 119.99531 * 179.97438 * 8 6 5 10 10 C 1.53006 * 109.46883 * 179.97438 * 9 8 6 11 11 F 1.39897 * 112.84585 * 50.33728 * 10 9 8 12 12 C 1.53776 * 113.61296 * 181.53098 * 10 9 8 13 13 C 1.53781 * 87.07906 * 139.98550 * 12 10 9 14 14 H 1.09002 * 113.61255 * 219.93188 * 13 12 10 15 15 N 1.46504 * 113.61861 * 89.11530 * 13 12 10 16 16 C 1.34773 * 119.99958 * 154.99754 * 15 13 12 17 17 O 1.21285 * 120.00352 * 0.02562 * 16 15 13 18 18 C 1.50703 * 119.99857 * 180.02562 * 16 15 13 19 19 C 1.53537 * 109.82071 * 80.00179 * 18 16 15 20 20 C 1.53037 * 108.56069 * 180.49220 * 19 18 16 21 21 C 1.50207 * 110.31657 * 310.42514 * 20 19 18 22 22 C 1.50703 * 118.54867 * 200.03110 * 21 20 19 23 23 O 1.42904 * 109.46900 * 69.99994 * 22 21 20 24 24 Si 1.86301 * 109.46995 * 189.99954 * 22 21 20 25 25 C 1.31119 * 122.90354 * 20.05487 * 21 20 19 26 26 N 1.38921 * 121.84888 * 359.59279 * 25 21 20 27 27 C 1.53782 * 113.61417 * 279.14139 * 10 9 8 28 28 H 1.09007 * 109.46867 * 300.00066 * 1 2 3 29 29 H 1.08995 * 109.47089 * 59.99665 * 1 2 3 30 30 H 1.08995 * 109.47061 * 179.97438 * 1 2 3 31 31 H 1.08999 * 109.47393 * 179.97438 * 3 2 1 32 32 H 1.09005 * 109.47134 * 300.00257 * 3 2 1 33 33 H 1.09007 * 109.46618 * 59.99855 * 3 2 1 34 34 H 1.08999 * 109.46994 * 300.00562 * 4 2 1 35 35 H 1.09005 * 109.46770 * 60.00287 * 4 2 1 36 36 H 1.08995 * 109.47195 * 179.97438 * 4 2 1 37 37 H 0.96992 * 120.00503 * 359.97438 * 8 6 5 38 38 H 1.09001 * 109.46891 * 60.00097 * 9 8 6 39 39 H 1.08993 * 109.47378 * 299.99469 * 9 8 6 40 40 H 1.09001 * 113.61151 * 254.52954 * 12 10 9 41 41 H 1.08993 * 113.61874 * 25.35220 * 12 10 9 42 42 H 0.97001 * 119.99487 * 335.00328 * 15 13 12 43 43 H 1.09005 * 109.80900 * 319.13608 * 18 16 15 44 44 H 1.09007 * 109.62548 * 300.20795 * 19 18 16 45 45 H 1.09003 * 109.62600 * 60.57933 * 19 18 16 46 46 H 1.09001 * 109.33569 * 70.68873 * 20 19 18 47 47 H 1.09003 * 109.33282 * 190.16875 * 20 19 18 48 48 H 1.08998 * 109.47120 * 310.00350 * 22 21 20 49 49 H 0.96694 * 113.99804 * 179.97438 * 23 22 21 50 50 H 1.48498 * 110.00113 * 300.00019 * 24 22 21 51 51 H 1.48497 * 109.99796 * 61.32017 * 24 22 21 52 52 H 1.08000 * 119.07130 * 179.61836 * 25 21 20 53 53 H 0.97004 * 120.55672 * 193.33865 * 26 25 21 54 54 H 1.09001 * 113.61419 * 334.56634 * 27 10 9 55 55 H 1.09001 * 113.61317 * 105.46831 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6846 1.1856 6 6 1.6523 -1.9724 1.3383 7 8 0.9509 -2.5094 0.5040 8 7 2.0672 -2.6655 2.4171 9 6 1.6730 -4.0666 2.5836 10 6 2.2733 -4.6147 3.8799 11 9 2.0252 -3.7919 4.9837 12 6 1.9484 -6.0967 4.1308 13 6 3.3941 -6.2474 4.6327 14 1 3.8710 -7.1757 4.3182 15 7 3.5481 -5.9860 6.0660 16 6 4.5728 -6.5381 6.7454 17 8 5.3677 -7.2511 6.1702 18 6 4.7308 -6.2697 8.2199 19 6 3.7746 -7.1675 9.0179 20 6 3.9498 -6.8631 10.5074 21 6 5.4054 -6.8879 10.8771 22 6 5.7775 -7.0709 12.3260 23 8 5.4687 -8.4058 12.7322 24 14 7.6020 -6.7622 12.5423 25 6 6.3667 -6.7571 9.9950 26 7 6.1019 -6.5927 8.6412 27 6 3.7454 -5.0388 3.7460 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 -0.0005 31 1 3.1301 1.4424 0.0005 32 1 1.6768 1.9563 -0.8900 33 1 1.6767 1.9563 0.8901 34 1 1.6766 -1.7489 -1.2492 35 1 1.6767 -0.2074 -2.1392 36 1 3.1300 -0.7209 -1.2495 37 1 2.6268 -2.2367 3.0833 38 1 2.0395 -4.6499 1.7388 39 1 0.5862 -4.1355 2.6285 40 1 1.1984 -6.2540 4.9060 41 1 1.7401 -6.6583 3.2202 42 1 2.9125 -5.4155 6.5259 43 1 4.5158 -5.2219 8.4297 44 1 2.7460 -6.9621 8.7209 45 1 4.0090 -8.2144 8.8254 46 1 3.5390 -5.8772 10.7251 47 1 3.4158 -7.6109 11.0938 48 1 5.2146 -6.3657 12.9375 49 1 5.6829 -8.5953 13.6558 50 1 8.3805 -7.7174 11.7137 51 1 7.9307 -5.3673 12.1534 52 1 7.3931 -6.7780 10.3304 53 1 6.8096 -6.6897 7.9850 54 1 4.0307 -5.3109 2.7299 55 1 4.4441 -4.3433 4.2111 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_15413834.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:06:19 Heat of formation + Delta-G solvation = -146.772641 kcal Electronic energy + Delta-G solvation = -36540.245651 eV Core-core repulsion = 31494.556545 eV Total energy + Delta-G solvation = -5045.689106 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.210 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -48.95780 -41.86857 -41.61963 -40.07344 -39.09124 -38.35754 -37.35371 -36.06188 -35.05988 -34.38492 -33.39678 -32.95688 -29.36669 -28.40038 -28.33882 -27.56838 -27.11839 -25.52686 -24.44754 -23.60684 -22.90332 -22.05015 -21.35466 -20.68804 -19.43710 -19.28860 -19.21856 -18.20983 -17.92599 -17.69831 -17.46604 -17.32048 -16.96848 -16.79909 -16.49895 -16.28821 -15.97487 -15.72090 -15.48953 -15.44762 -15.30720 -15.13548 -14.81375 -14.61807 -14.50569 -14.46377 -14.30377 -13.91901 -13.85762 -13.58504 -13.40304 -13.34694 -13.18838 -13.14862 -13.10458 -12.95436 -12.90845 -12.78363 -12.54296 -12.51214 -12.39260 -12.03867 -11.69188 -11.65394 -11.44778 -11.42291 -11.41173 -11.18774 -11.00541 -10.37913 -10.29198 -10.11461 -8.61553 -4.92350 1.04894 1.15074 1.27884 1.37949 1.63651 1.66984 1.71454 1.97226 2.44999 2.87150 2.95226 3.12363 3.21375 3.37402 3.52494 3.55105 3.60697 3.63682 3.70293 3.75751 3.89363 3.90649 3.97995 4.15399 4.26285 4.31132 4.33169 4.46279 4.49994 4.54431 4.54970 4.57712 4.58158 4.64799 4.70142 4.70939 4.73207 4.77435 4.81793 4.84064 4.84487 4.87434 4.96068 5.00876 5.10034 5.15509 5.17199 5.23690 5.29510 5.39291 5.45695 5.50609 6.07694 6.23615 6.29596 6.60349 6.95711 7.02629 7.22528 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.646 3.354 7 O -0.590 6.590 8 N -0.702 5.702 9 C 0.130 3.870 10 C 0.085 3.915 11 F -0.191 7.191 12 C -0.139 4.139 13 C 0.112 3.888 14 H 0.104 0.896 15 N -0.695 5.695 16 C 0.519 3.481 17 O -0.570 6.570 18 C 0.137 3.863 19 C -0.121 4.121 20 C -0.054 4.054 21 C -0.242 4.242 22 C -0.052 4.052 23 O -0.569 6.569 24 Si 0.750 3.250 25 C 0.116 3.884 26 N -0.740 5.740 27 C -0.162 4.162 28 H 0.061 0.939 29 H 0.087 0.913 30 H 0.065 0.935 31 H 0.069 0.931 32 H 0.099 0.901 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.087 0.913 36 H 0.061 0.939 37 H 0.415 0.585 38 H 0.102 0.898 39 H 0.082 0.918 40 H 0.102 0.898 41 H 0.141 0.859 42 H 0.417 0.583 43 H 0.112 0.888 44 H 0.107 0.893 45 H 0.053 0.947 46 H 0.085 0.915 47 H 0.078 0.922 48 H 0.084 0.916 49 H 0.397 0.603 50 H -0.303 1.303 51 H -0.292 1.292 52 H 0.117 0.883 53 H 0.405 0.595 54 H 0.126 0.874 55 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.348 3.197 3.150 5.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.399 3.601 7 O -0.481 6.481 8 N -0.362 5.362 9 C 0.008 3.992 10 C 0.066 3.934 11 F -0.171 7.171 12 C -0.178 4.178 13 C 0.006 3.994 14 H 0.122 0.878 15 N -0.347 5.347 16 C 0.306 3.694 17 O -0.448 6.448 18 C 0.028 3.972 19 C -0.159 4.159 20 C -0.091 4.091 21 C -0.252 4.252 22 C -0.164 4.164 23 O -0.378 6.378 24 Si 0.659 3.341 25 C -0.004 4.004 26 N -0.373 5.373 27 C -0.200 4.200 28 H 0.080 0.920 29 H 0.106 0.894 30 H 0.083 0.917 31 H 0.088 0.912 32 H 0.118 0.882 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.106 0.894 36 H 0.080 0.920 37 H 0.251 0.749 38 H 0.120 0.880 39 H 0.100 0.900 40 H 0.121 0.879 41 H 0.159 0.841 42 H 0.255 0.745 43 H 0.130 0.870 44 H 0.125 0.875 45 H 0.072 0.928 46 H 0.103 0.897 47 H 0.096 0.904 48 H 0.102 0.898 49 H 0.247 0.753 50 H -0.232 1.232 51 H -0.219 1.219 52 H 0.134 0.866 53 H 0.241 0.759 54 H 0.144 0.856 55 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.738 2.747 1.302 3.502 hybrid contribution 0.121 0.457 -0.160 0.500 sum -1.617 3.205 1.142 3.767 Atomic orbital electron populations 1.22476 0.93938 1.03770 1.03541 1.22380 0.94538 0.92559 0.81472 1.21899 1.02436 0.90946 1.04263 1.22475 1.01632 1.02318 0.97268 1.86316 1.71543 1.23257 1.47395 1.18250 0.78691 0.80834 0.82303 1.90915 1.42008 1.70969 1.44183 1.44530 1.55547 1.12712 1.23432 1.21889 1.01194 0.79407 0.96746 1.22213 0.97986 0.90545 0.82610 1.92858 1.95203 1.74100 1.54942 1.23956 0.96385 0.92227 1.05210 1.21948 0.97889 0.99467 0.80069 0.87809 1.45573 1.29185 1.50689 1.09284 1.20748 0.80753 0.78768 0.89166 1.90725 1.44198 1.38929 1.70953 1.21149 0.84679 1.01464 0.89894 1.21841 0.99601 0.98735 0.95753 1.20030 0.92058 1.02752 0.94255 1.20475 0.96036 1.14804 0.93922 1.24478 1.10841 0.87161 0.93882 1.86455 1.88146 1.28709 1.34483 0.94624 0.74677 0.75862 0.88979 1.20314 0.97177 0.98534 0.84370 1.44296 1.09255 1.79201 1.04529 1.24203 0.94718 0.98081 1.03043 0.92018 0.89381 0.91652 0.91234 0.88218 0.91259 0.91593 0.89421 0.91960 0.74920 0.87979 0.89995 0.87909 0.84110 0.74517 0.87040 0.87483 0.92795 0.89658 0.90396 0.89813 0.75279 1.23233 1.21929 0.86587 0.75912 0.85583 0.90239 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 2 C 0.13 0.32 1.13 -10.79 -0.01 0.31 16 3 C -0.14 0.30 8.85 71.98 0.64 0.94 16 4 C -0.18 -0.44 8.37 71.98 0.60 0.16 16 5 O -0.37 -1.93 9.94 -55.45 -0.55 -2.48 16 6 C 0.65 3.68 8.06 129.79 1.05 4.73 16 7 O -0.59 -6.07 11.88 19.82 0.24 -5.84 16 8 N -0.70 0.32 5.48 -590.85 -3.24 -2.91 16 9 C 0.13 -0.57 5.35 86.38 0.46 -0.11 16 10 C 0.09 -0.59 1.63 -10.27 -0.02 -0.61 16 11 F -0.19 0.73 15.78 44.97 0.71 1.44 16 12 C -0.14 1.32 7.28 31.12 0.23 1.55 16 13 C 0.11 -0.54 4.33 45.58 0.20 -0.34 16 14 H 0.10 -0.14 7.46 -2.39 -0.02 -0.16 16 15 N -0.70 2.61 5.18 -439.74 -2.28 0.33 16 16 C 0.52 1.27 7.10 87.66 0.62 1.89 16 17 O -0.57 -6.18 15.66 -3.04 -0.05 -6.23 16 18 C 0.14 0.08 3.36 44.33 0.15 0.23 16 19 C -0.12 0.03 5.47 30.79 0.17 0.20 16 20 C -0.05 -0.04 5.85 29.71 0.17 0.13 16 21 C -0.24 -1.09 5.40 -16.76 -0.09 -1.18 16 22 C -0.05 -0.03 2.80 71.24 0.20 0.17 16 23 O -0.57 -0.88 12.86 -148.98 -1.92 -2.79 16 24 Si 0.75 -0.10 29.91 68.60 2.05 1.95 16 25 C 0.12 0.74 9.62 83.41 0.80 1.54 16 26 N -0.74 -3.92 5.47 -329.00 -1.80 -5.72 16 27 C -0.16 1.00 7.34 31.18 0.23 1.23 16 28 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 29 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 30 H 0.06 0.50 5.88 -2.39 -0.01 0.48 16 31 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.10 -0.55 8.14 -2.38 -0.02 -0.57 16 33 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 34 H 0.07 0.48 5.88 -2.39 -0.01 0.47 16 35 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.41 -1.15 8.34 -92.71 -0.77 -1.93 16 38 H 0.10 -0.57 7.98 -2.39 -0.02 -0.59 16 39 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 40 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 41 H 0.14 -1.82 8.10 -2.39 -0.02 -1.84 16 42 H 0.42 -3.20 7.78 -92.71 -0.72 -3.92 16 43 H 0.11 -0.39 8.14 -2.38 -0.02 -0.41 16 44 H 0.11 -0.63 8.14 -2.38 -0.02 -0.65 16 45 H 0.05 0.27 8.14 -2.39 -0.02 0.25 16 46 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 47 H 0.08 0.16 8.14 -2.39 -0.02 0.14 16 48 H 0.08 -0.28 7.96 -2.39 -0.02 -0.30 16 49 H 0.40 -3.43 8.74 -74.06 -0.65 -4.08 16 50 H -0.30 -2.41 6.89 99.48 0.69 -1.72 16 51 H -0.29 -1.55 7.11 99.48 0.71 -0.85 16 52 H 0.12 0.80 4.34 -2.91 -0.01 0.79 16 53 H 0.40 2.56 8.08 -92.71 -0.75 1.81 16 54 H 0.13 -1.05 7.99 -2.39 -0.02 -1.07 16 55 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 Total: 0.00 -24.93 437.12 -2.76 -27.68 By element: Atomic # 1 Polarization: -14.47 SS G_CDS: -1.92 Total: -16.40 kcal Atomic # 6 Polarization: 4.97 SS G_CDS: 6.00 Total: 10.96 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -7.31 Total: -8.30 kcal Atomic # 8 Polarization: -15.07 SS G_CDS: -2.28 Total: -17.34 kcal Atomic # 9 Polarization: 0.73 SS G_CDS: 0.71 Total: 1.44 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: 2.05 Total: 1.95 kcal Total: -24.93 -2.76 -27.68 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_15413834.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.089 kcal (2) G-P(sol) polarization free energy of solvation -24.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.758 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.684 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds