Wall clock time and date at job start Thu Mar 4 2021 16:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52997 * 109.47201 * 2 1 4 4 C 1.53004 * 109.47214 * 240.00104 * 2 1 3 5 5 O 1.45203 * 109.47273 * 120.00234 * 2 1 3 6 6 C 1.34635 * 117.00201 * 59.99837 * 5 2 1 7 7 O 1.21508 * 119.99897 * 0.02562 * 6 5 2 8 8 N 1.34770 * 120.00171 * 180.02562 * 6 5 2 9 9 C 1.46498 * 120.00598 * 180.02562 * 8 6 5 10 10 C 1.52996 * 109.47750 * 180.02562 * 9 8 6 11 11 F 1.39899 * 112.90849 * 316.25036 * 10 9 8 12 12 C 1.54048 * 113.61813 * 87.50386 * 10 9 8 13 13 C 1.53777 * 86.98472 * 139.98156 * 12 10 9 14 14 H 1.09009 * 113.61718 * 219.97991 * 13 12 10 15 15 N 1.46498 * 113.61703 * 89.16114 * 13 12 10 16 16 C 1.34774 * 120.00027 * 105.86210 * 15 13 12 17 17 O 1.21285 * 120.00303 * 0.02562 * 16 15 13 18 18 C 1.50698 * 120.00023 * 180.02562 * 16 15 13 19 19 C 1.53038 * 109.34347 * 179.07586 * 18 16 15 20 20 C 1.53542 * 108.56694 * 169.76740 * 19 18 16 21 21 N 1.47032 * 107.71087 * 299.14343 * 20 19 18 22 22 C 1.38933 * 118.88079 * 43.63341 * 21 20 19 23 23 C 1.31118 * 121.84752 * 346.68199 * 22 21 20 24 24 C 1.50700 * 118.54399 * 180.43158 * 23 22 21 25 25 O 1.42902 * 109.46753 * 249.99984 * 24 23 22 26 26 Si 1.86302 * 109.47182 * 9.99856 * 24 23 22 27 27 C 1.53782 * 113.61366 * 184.99856 * 10 9 8 28 28 H 1.08997 * 109.47096 * 299.99834 * 1 2 3 29 29 H 1.09002 * 109.47113 * 59.99887 * 1 2 3 30 30 H 1.09009 * 109.46731 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47839 * 179.97438 * 3 2 1 32 32 H 1.08994 * 109.47200 * 300.00423 * 3 2 1 33 33 H 1.09010 * 109.46786 * 59.99788 * 3 2 1 34 34 H 1.08997 * 109.46971 * 299.99897 * 4 2 1 35 35 H 1.08994 * 109.46776 * 59.99829 * 4 2 1 36 36 H 1.09003 * 109.46922 * 179.97438 * 4 2 1 37 37 H 0.97005 * 119.99794 * 0.02562 * 8 6 5 38 38 H 1.09002 * 109.46938 * 59.99509 * 9 8 6 39 39 H 1.09004 * 109.46933 * 300.00590 * 9 8 6 40 40 H 1.09004 * 113.61376 * 25.47452 * 12 10 9 41 41 H 1.09003 * 113.69484 * 254.49521 * 12 10 9 42 42 H 0.96997 * 120.00319 * 285.86105 * 15 13 12 43 43 H 1.08994 * 109.33143 * 59.65505 * 18 16 15 44 44 H 1.09004 * 109.56761 * 50.07474 * 19 18 16 45 45 H 1.09001 * 109.67432 * 289.52354 * 19 18 16 46 46 H 1.09002 * 109.82440 * 179.57311 * 20 19 18 47 47 H 1.08998 * 109.82054 * 58.71325 * 20 19 18 48 48 H 0.96993 * 120.55832 * 223.65160 * 21 20 19 49 49 H 1.07995 * 119.07254 * 166.70741 * 22 21 20 50 50 H 1.08999 * 109.46992 * 129.99509 * 24 23 22 51 51 H 0.96694 * 114.00026 * 60.00578 * 25 24 23 52 52 H 1.48499 * 110.00101 * 58.67950 * 26 24 23 53 53 H 1.48495 * 109.99836 * 180.02562 * 26 24 23 54 54 H 1.09007 * 113.60957 * 105.47213 * 27 10 9 55 55 H 1.08998 * 113.61585 * 334.56805 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3383 7 8 0.9517 -2.5097 0.5036 8 7 2.0673 -2.6654 2.4171 9 6 1.6742 -4.0669 2.5831 10 6 2.2731 -4.6145 3.8801 11 9 3.6084 -4.2396 4.0641 12 6 1.3885 -4.3742 5.1181 13 6 1.7803 -5.7902 5.5722 14 1 0.9565 -6.3505 6.0148 15 7 2.9973 -5.8297 6.3867 16 6 2.9124 -6.0376 7.7156 17 8 1.8285 -6.1925 8.2372 18 6 4.1643 -6.0776 8.5535 19 6 3.7863 -6.3032 10.0192 20 6 5.0664 -6.5971 10.8146 21 7 5.6699 -7.8160 10.2562 22 6 5.7328 -7.9621 8.8760 23 6 5.0533 -7.1861 8.0665 24 6 5.1691 -7.4168 6.5818 25 8 5.8913 -6.3367 5.9869 26 14 6.0742 -9.0151 6.2704 27 6 2.0208 -6.1170 4.0889 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0278 -0.0005 31 1 3.1299 1.4426 0.0005 32 1 1.6766 1.9563 -0.8899 33 1 1.6766 1.9563 0.8901 34 1 1.6767 -1.7489 -1.2493 35 1 1.6767 -0.2074 -2.1392 36 1 3.1301 -0.7208 -1.2495 37 1 2.6263 -2.2363 3.0836 38 1 2.0413 -4.6498 1.7384 39 1 0.5873 -4.1366 2.6274 40 1 0.3292 -4.2681 4.8840 41 1 1.7587 -3.5870 5.7749 42 1 3.8643 -5.7062 5.9696 43 1 4.6900 -5.1272 8.4624 44 1 3.1058 -7.1514 10.0944 45 1 3.3060 -5.4089 10.4162 46 1 4.8211 -6.7539 11.8650 47 1 5.7612 -5.7629 10.7180 48 1 6.0181 -8.5066 10.8416 49 1 6.3585 -8.7369 8.4583 50 1 4.1725 -7.4724 6.1440 51 1 6.7889 -6.2278 6.3295 52 1 5.3501 -10.1421 6.9114 53 1 6.1955 -9.2539 4.8098 54 1 2.9012 -6.7359 3.9153 55 1 1.1341 -6.4866 3.5739 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734490_15608500.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:06:24 Heat of formation + Delta-G solvation = -140.027332 kcal Electronic energy + Delta-G solvation = -38093.632449 eV Core-core repulsion = 33048.235842 eV Total energy + Delta-G solvation = -5045.396608 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.210 amu Computer time = 1.57 seconds Orbital eigenvalues (eV) -48.93884 -41.86838 -41.69943 -39.91862 -38.93226 -38.34898 -37.55868 -36.02800 -35.00811 -34.29714 -33.16766 -32.65263 -29.29518 -28.39319 -28.32862 -27.35934 -27.09954 -25.99934 -24.15785 -23.26084 -22.88611 -21.99009 -21.34276 -20.62336 -19.40327 -19.27917 -18.97792 -18.19492 -17.81692 -17.47504 -17.41916 -17.10877 -16.98749 -16.80045 -16.48493 -16.30404 -15.91792 -15.73888 -15.48350 -15.41703 -15.30834 -15.06152 -14.80290 -14.62347 -14.51689 -14.45036 -14.16419 -13.98223 -13.91323 -13.48696 -13.39384 -13.21260 -13.15728 -13.10141 -12.94662 -12.90059 -12.77084 -12.59260 -12.50922 -12.38481 -12.24546 -11.96883 -11.88718 -11.66188 -11.44212 -11.41192 -11.36209 -11.18453 -10.85988 -10.37578 -10.30597 -10.00790 -8.44610 -5.01784 1.04872 1.22253 1.36003 1.60469 1.65298 1.66875 2.00427 2.16612 2.66876 2.87078 2.94848 3.10868 3.19130 3.45974 3.53435 3.58104 3.71147 3.71454 3.76585 3.87544 3.91489 3.93053 4.18995 4.26407 4.30611 4.32896 4.37810 4.45645 4.52581 4.54654 4.55003 4.58919 4.61759 4.70176 4.72080 4.73978 4.75494 4.78731 4.79592 4.82371 4.84926 4.85707 4.92521 5.02735 5.16425 5.19613 5.24508 5.25735 5.30230 5.43893 5.49579 5.51620 6.23695 6.31309 6.46547 6.92851 6.98170 7.19892 7.22346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.126 3.874 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.647 3.353 7 O -0.590 6.590 8 N -0.702 5.702 9 C 0.133 3.867 10 C 0.086 3.914 11 F -0.189 7.189 12 C -0.159 4.159 13 C 0.104 3.896 14 H 0.102 0.898 15 N -0.708 5.708 16 C 0.521 3.479 17 O -0.582 6.582 18 C -0.034 4.034 19 C -0.121 4.121 20 C 0.123 3.877 21 N -0.744 5.744 22 C 0.170 3.830 23 C -0.303 4.303 24 C -0.067 4.067 25 O -0.557 6.557 26 Si 0.763 3.237 27 C -0.147 4.147 28 H 0.062 0.938 29 H 0.088 0.912 30 H 0.065 0.935 31 H 0.068 0.932 32 H 0.100 0.900 33 H 0.069 0.931 34 H 0.064 0.936 35 H 0.088 0.912 36 H 0.061 0.939 37 H 0.415 0.585 38 H 0.082 0.918 39 H 0.104 0.896 40 H 0.129 0.871 41 H 0.077 0.923 42 H 0.422 0.578 43 H 0.106 0.894 44 H 0.053 0.947 45 H 0.076 0.924 46 H 0.099 0.901 47 H 0.075 0.925 48 H 0.415 0.585 49 H 0.154 0.846 50 H 0.097 0.903 51 H 0.398 0.602 52 H -0.297 1.297 53 H -0.303 1.303 54 H 0.089 0.911 55 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.174 0.350 3.251 6.987 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.090 3.910 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.362 5.362 9 C 0.010 3.990 10 C 0.067 3.933 11 F -0.169 7.169 12 C -0.198 4.198 13 C -0.002 4.002 14 H 0.120 0.880 15 N -0.365 5.365 16 C 0.310 3.690 17 O -0.462 6.462 18 C -0.055 4.055 19 C -0.160 4.160 20 C -0.001 4.001 21 N -0.375 5.375 22 C 0.047 3.953 23 C -0.314 4.314 24 C -0.178 4.178 25 O -0.366 6.366 26 Si 0.671 3.329 27 C -0.185 4.185 28 H 0.081 0.919 29 H 0.107 0.893 30 H 0.083 0.917 31 H 0.087 0.913 32 H 0.119 0.881 33 H 0.088 0.912 34 H 0.083 0.917 35 H 0.107 0.893 36 H 0.080 0.920 37 H 0.251 0.749 38 H 0.100 0.900 39 H 0.122 0.878 40 H 0.147 0.853 41 H 0.096 0.904 42 H 0.264 0.736 43 H 0.124 0.876 44 H 0.072 0.928 45 H 0.095 0.905 46 H 0.117 0.883 47 H 0.093 0.907 48 H 0.251 0.749 49 H 0.171 0.829 50 H 0.114 0.886 51 H 0.249 0.751 52 H -0.224 1.224 53 H -0.232 1.232 54 H 0.107 0.893 55 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 4.505 -0.525 2.540 5.198 hybrid contribution -0.019 0.197 0.150 0.248 sum 4.486 -0.328 2.690 5.240 Atomic orbital electron populations 1.22476 0.93841 1.03791 1.03587 1.22394 0.94618 0.92573 0.81407 1.21898 1.02445 0.90868 1.04306 1.22479 1.01614 1.02288 0.97367 1.86318 1.71538 1.23184 1.47438 1.18216 0.78704 0.80865 0.82192 1.90911 1.42147 1.70963 1.44023 1.44523 1.55590 1.12535 1.23594 1.21874 1.01531 0.79123 0.96482 1.22241 0.78217 0.97521 0.95335 1.92872 1.35523 1.92395 1.96148 1.24216 1.01975 0.98102 0.95459 1.21931 0.89113 0.97641 0.91514 0.88011 1.46394 1.10611 1.72005 1.07499 1.21149 0.91219 0.74017 0.82664 1.90669 1.31283 1.51256 1.73015 1.19673 0.91641 0.99983 0.94177 1.21708 0.98283 1.02531 0.93434 1.21675 0.92814 0.87792 0.97818 1.44697 1.66290 1.22720 1.03743 1.20580 0.94212 0.96216 0.84324 1.20434 1.09057 1.06646 0.95302 1.25091 1.00176 1.01217 0.91365 1.86321 1.32215 1.52171 1.65884 0.94332 0.87223 0.73289 0.78035 1.23995 1.06000 0.93742 0.94798 0.91930 0.89341 0.91653 0.91251 0.88147 0.91200 0.91719 0.89298 0.92034 0.74901 0.90008 0.87840 0.85267 0.90389 0.73555 0.87634 0.92778 0.90492 0.88317 0.90700 0.74889 0.82919 0.88595 0.75123 1.22436 1.23156 0.89263 0.83862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.65 8.37 71.98 0.60 -0.05 16 2 C 0.13 0.48 1.13 -10.79 -0.01 0.46 16 3 C -0.14 0.17 8.85 71.98 0.64 0.81 16 4 C -0.18 -0.71 8.37 71.98 0.60 -0.11 16 5 O -0.37 -2.57 9.94 -55.44 -0.55 -3.12 16 6 C 0.65 5.09 8.06 129.79 1.05 6.14 16 7 O -0.59 -7.19 11.88 19.82 0.24 -6.95 16 8 N -0.70 -1.83 5.45 -590.88 -3.22 -5.06 16 9 C 0.13 -0.08 5.43 86.38 0.47 0.38 16 10 C 0.09 -0.13 1.74 -10.18 -0.02 -0.15 16 11 F -0.19 -0.51 15.53 44.97 0.70 0.19 16 12 C -0.16 0.21 7.34 31.21 0.23 0.43 16 13 C 0.10 0.14 4.29 45.52 0.20 0.34 16 14 H 0.10 0.39 7.50 -2.38 -0.02 0.37 16 15 N -0.71 -2.65 3.48 -440.04 -1.53 -4.18 16 16 C 0.52 3.89 6.82 87.66 0.60 4.49 16 17 O -0.58 -8.69 15.41 -3.04 -0.05 -8.74 16 18 C -0.03 -0.06 2.74 -12.43 -0.03 -0.09 16 19 C -0.12 -0.14 4.92 30.79 0.15 0.02 16 20 C 0.12 -0.67 7.15 86.46 0.62 -0.05 16 21 N -0.74 4.60 5.83 -345.88 -2.02 2.58 16 22 C 0.17 -0.80 9.62 83.41 0.80 0.00 16 23 C -0.30 0.42 5.03 -16.76 -0.08 0.34 16 24 C -0.07 0.09 1.69 71.24 0.12 0.21 16 25 O -0.56 1.74 11.40 -148.98 -1.70 0.04 16 26 Si 0.76 -2.10 29.73 68.60 2.04 -0.07 16 27 C -0.15 0.45 7.28 31.12 0.23 0.68 16 28 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 29 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 30 H 0.06 0.56 5.88 -2.38 -0.01 0.55 16 31 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 32 H 0.10 -0.48 8.14 -2.39 -0.02 -0.50 16 33 H 0.07 -0.10 8.14 -2.38 -0.02 -0.12 16 34 H 0.06 0.58 5.88 -2.39 -0.01 0.57 16 35 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 36 H 0.06 0.22 8.14 -2.39 -0.02 0.20 16 37 H 0.41 0.26 8.14 -92.70 -0.75 -0.49 16 38 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 39 H 0.10 -0.25 7.85 -2.39 -0.02 -0.27 16 40 H 0.13 -0.61 7.90 -2.38 -0.02 -0.63 16 41 H 0.08 0.09 8.14 -2.39 -0.02 0.08 16 42 H 0.42 1.15 4.42 -92.71 -0.41 0.74 16 43 H 0.11 -0.03 8.14 -2.39 -0.02 -0.05 16 44 H 0.05 0.35 7.75 -2.38 -0.02 0.33 16 45 H 0.08 0.11 8.14 -2.39 -0.02 0.09 16 46 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 47 H 0.07 -0.52 8.14 -2.39 -0.02 -0.54 16 48 H 0.41 -4.21 8.96 -92.71 -0.83 -5.04 16 49 H 0.15 -1.44 4.49 -2.91 -0.01 -1.46 16 50 H 0.10 0.25 5.33 -2.39 -0.01 0.24 16 51 H 0.40 -4.42 8.70 -74.06 -0.64 -5.06 16 52 H -0.30 -1.00 7.11 99.48 0.71 -0.29 16 53 H -0.30 -1.58 7.11 99.48 0.71 -0.88 16 54 H 0.09 -0.17 8.14 -2.38 -0.02 -0.19 16 55 H 0.14 -1.14 8.10 -2.39 -0.02 -1.15 16 Total: 0.00 -24.14 426.59 -1.59 -25.73 By element: Atomic # 1 Polarization: -12.64 SS G_CDS: -1.64 Total: -14.29 kcal Atomic # 6 Polarization: 7.71 SS G_CDS: 6.15 Total: 13.86 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -6.77 Total: -6.66 kcal Atomic # 8 Polarization: -16.71 SS G_CDS: -2.06 Total: -18.77 kcal Atomic # 9 Polarization: -0.51 SS G_CDS: 0.70 Total: 0.19 kcal Atomic # 14 Polarization: -2.10 SS G_CDS: 2.04 Total: -0.07 kcal Total: -24.14 -1.59 -25.73 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734490_15608500.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.296 kcal (2) G-P(sol) polarization free energy of solvation -24.143 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.439 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.589 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.731 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.57 seconds