Wall clock time and date at job start Thu Mar 4 2021 16:12:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.36422 * 125.79653 * 2 1 4 4 C 1.47378 * 127.19280 * 0.03793 * 3 2 1 5 5 O 1.21609 * 120.00113 * 0.02562 * 4 3 2 6 6 N 1.34779 * 119.99576 * 179.97438 * 4 3 2 7 7 C 1.46507 * 119.99461 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.85186 * 23.80469 * 7 6 4 9 9 C 1.53783 * 113.60852 * 155.00417 * 7 6 4 10 10 C 1.53787 * 87.07691 * 139.98175 * 9 7 6 11 11 F 1.39899 * 113.61537 * 89.19762 * 10 9 7 12 12 C 1.53000 * 113.60799 * 220.01433 * 10 9 7 13 13 N 1.46505 * 109.46905 * 185.00039 * 12 10 9 14 14 C 1.34773 * 120.00331 * 180.02562 * 13 12 10 15 15 O 1.21514 * 119.99645 * 359.97438 * 14 13 12 16 16 O 1.34637 * 120.00488 * 180.02562 * 14 13 12 17 17 C 1.45193 * 117.00141 * 179.97438 * 16 14 13 18 18 C 1.53005 * 109.47253 * 60.00110 * 17 16 14 19 19 C 1.53002 * 109.47144 * 179.97438 * 17 16 14 20 20 C 1.52996 * 109.47544 * 299.99787 * 17 16 14 21 21 C 1.53779 * 87.08160 * 334.56577 * 10 9 7 22 22 C 1.47015 * 105.61243 * 179.79832 * 3 2 1 23 23 C 1.34182 * 105.95661 * 0.39046 * 22 3 2 24 24 C 1.50701 * 125.43940 * 179.86981 * 23 22 3 25 25 O 1.42905 * 109.46937 * 299.71858 * 24 23 22 26 26 Si 1.86301 * 109.47149 * 179.71787 * 24 23 22 27 27 O 1.33650 * 125.80375 * 180.02562 * 2 1 3 28 28 H 1.09001 * 109.46754 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47413 * 299.97744 * 1 2 3 30 30 H 1.08998 * 109.47200 * 59.98449 * 1 2 3 31 31 H 0.96998 * 120.00348 * 0.02562 * 6 4 3 32 32 H 1.08997 * 113.60902 * 254.52424 * 9 7 6 33 33 H 1.08991 * 113.61605 * 25.34890 * 9 7 6 34 34 H 1.09003 * 109.47440 * 304.99607 * 12 10 9 35 35 H 1.08995 * 109.47078 * 65.00595 * 12 10 9 36 36 H 0.97006 * 119.99961 * 359.97438 * 13 12 10 37 37 H 1.08999 * 109.47255 * 59.99564 * 18 17 16 38 38 H 1.09000 * 109.46999 * 179.97438 * 18 17 16 39 39 H 1.09006 * 109.46704 * 299.99737 * 18 17 16 40 40 H 1.09000 * 109.46771 * 60.00176 * 19 17 16 41 41 H 1.09000 * 109.47313 * 179.97438 * 19 17 16 42 42 H 1.08995 * 109.47579 * 300.00407 * 19 17 16 43 43 H 1.09006 * 109.47071 * 59.99860 * 20 17 16 44 44 H 1.08997 * 109.47489 * 179.97438 * 20 17 16 45 45 H 1.09000 * 109.47076 * 300.00256 * 20 17 16 46 46 H 1.09004 * 113.60864 * 270.88553 * 21 10 9 47 47 H 1.08991 * 113.61560 * 139.98579 * 21 10 9 48 48 H 1.08007 * 127.02396 * 180.26158 * 22 3 2 49 49 H 1.09001 * 109.46927 * 59.71602 * 24 23 22 50 50 H 0.96702 * 113.99404 * 180.02562 * 25 24 23 51 51 H 1.48503 * 109.99816 * 59.99603 * 26 24 23 52 52 H 1.48501 * 109.99942 * 181.31689 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3049 1.1065 0.0000 4 6 1.8738 2.5158 0.0008 5 8 0.6888 2.7892 0.0020 6 7 2.7929 3.5016 0.0012 7 6 2.3642 4.9026 0.0014 8 1 1.3615 5.0384 0.4066 9 6 3.4052 5.8651 0.5973 10 6 3.0278 6.8440 -0.5271 11 9 1.9745 7.7021 -0.1931 12 6 4.2274 7.5810 -1.1262 13 7 3.7567 8.5704 -2.0988 14 6 4.6433 9.3427 -2.7573 15 8 5.8331 9.2188 -2.5440 16 8 4.2107 10.2524 -3.6507 17 6 5.2217 11.0496 -4.3219 18 6 6.1657 10.1284 -5.0974 19 6 4.5449 12.0194 -5.2927 20 6 6.0199 11.8406 -3.2837 21 6 2.5895 5.6159 -1.3422 22 6 3.6848 0.5993 0.0050 23 6 3.5859 -0.7389 -0.0013 24 6 4.7460 -1.7008 -0.0023 25 8 5.5424 -1.4854 -1.1691 26 14 4.1029 -3.4493 -0.0034 27 8 2.2889 -1.0839 -0.0005 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5135 0.8901 30 1 -0.3633 0.5141 -0.8898 31 1 3.7380 3.2836 0.0006 32 1 3.1476 6.2243 1.5936 33 1 4.4287 5.4963 0.5317 34 1 4.7775 8.0855 -0.3319 35 1 4.8819 6.8654 -1.6237 36 1 2.8068 8.6690 -2.2693 37 1 5.5971 9.5649 -5.8371 38 1 6.9244 10.7269 -5.6017 39 1 6.6479 9.4372 -4.4061 40 1 3.8722 12.6756 -4.7406 41 1 5.3038 12.6182 -5.7963 42 1 3.9765 11.4556 -6.0324 43 1 6.5021 11.1494 -2.5924 44 1 6.7791 12.4387 -3.7876 45 1 5.3474 12.4968 -2.7313 46 1 3.3903 5.1797 -1.9393 47 1 1.6736 5.7739 -1.9116 48 1 4.5927 1.1842 0.0103 49 1 5.3538 -1.5378 0.8877 50 1 6.3086 -2.0716 -1.2359 51 1 3.2724 -3.6842 -1.2119 52 1 5.2369 -4.4076 0.0278 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734572_13308374.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:12:14 Heat of formation + Delta-G solvation = -151.495181 kcal Electronic energy + Delta-G solvation = -35741.531747 eV Core-core repulsion = 30625.230673 eV Total energy + Delta-G solvation = -5116.301074 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.183 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -48.93040 -43.76787 -41.85019 -40.92629 -39.23507 -38.34407 -38.06828 -36.01735 -35.03589 -34.54502 -33.81378 -33.14697 -29.69088 -29.07647 -28.38558 -28.32509 -27.10310 -26.07241 -24.77083 -23.70041 -22.87498 -21.92151 -21.49732 -21.08298 -20.36034 -19.36431 -18.85159 -18.43430 -17.97369 -17.48153 -17.44877 -17.34863 -17.08872 -16.96227 -16.51582 -16.20928 -15.99180 -15.90394 -15.66771 -15.50801 -15.45813 -15.21356 -14.80073 -14.65349 -14.48300 -14.26600 -14.12373 -14.03188 -13.96861 -13.84990 -13.55198 -13.38441 -13.13720 -13.11998 -12.94822 -12.94074 -12.89431 -12.78788 -12.65614 -12.50438 -12.38149 -12.16936 -11.77643 -11.50372 -11.42473 -11.19617 -11.15435 -10.94853 -10.63326 -10.35860 -10.16222 -9.56129 -4.94850 0.21185 0.80719 1.06151 1.17620 1.35781 1.67499 1.67924 1.93758 2.09136 2.20752 2.89632 2.97756 3.12494 3.20333 3.24249 3.51490 3.53246 3.57004 3.71600 3.72206 3.76073 3.77184 3.92054 4.11920 4.22142 4.29749 4.33176 4.44728 4.49030 4.53502 4.55932 4.58444 4.59631 4.59868 4.65934 4.72149 4.74595 4.76634 4.80106 4.83613 4.85374 4.86607 4.98564 5.09406 5.13264 5.17941 5.22142 5.25145 5.30945 5.42181 5.51612 5.90864 6.24460 6.45717 6.52123 7.13197 7.23278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.083 3.917 3 C -0.269 4.269 4 C 0.591 3.409 5 O -0.573 6.573 6 N -0.698 5.698 7 C 0.123 3.877 8 H 0.102 0.898 9 C -0.140 4.140 10 C 0.087 3.913 11 F -0.195 7.195 12 C 0.134 3.866 13 N -0.704 5.704 14 C 0.647 3.353 15 O -0.589 6.589 16 O -0.371 6.371 17 C 0.126 3.874 18 C -0.179 4.179 19 C -0.139 4.139 20 C -0.180 4.180 21 C -0.163 4.163 22 C -0.144 4.144 23 C -0.025 4.025 24 C -0.035 4.035 25 O -0.553 6.553 26 Si 0.760 3.240 27 O -0.175 6.175 28 H 0.097 0.903 29 H 0.099 0.901 30 H 0.092 0.908 31 H 0.417 0.583 32 H 0.099 0.901 33 H 0.138 0.862 34 H 0.085 0.915 35 H 0.105 0.895 36 H 0.415 0.585 37 H 0.061 0.939 38 H 0.087 0.913 39 H 0.066 0.934 40 H 0.068 0.932 41 H 0.100 0.900 42 H 0.068 0.932 43 H 0.065 0.935 44 H 0.088 0.912 45 H 0.060 0.940 46 H 0.122 0.878 47 H 0.078 0.922 48 H 0.182 0.818 49 H 0.133 0.867 50 H 0.406 0.594 51 H -0.314 1.314 52 H -0.263 1.263 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.890 -2.373 2.349 5.126 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.030 3.970 3 C -0.273 4.273 4 C 0.381 3.619 5 O -0.454 6.454 6 N -0.350 5.350 7 C 0.018 3.982 8 H 0.120 0.880 9 C -0.179 4.179 10 C 0.068 3.932 11 F -0.175 7.175 12 C 0.011 3.989 13 N -0.365 5.365 14 C 0.400 3.600 15 O -0.480 6.480 16 O -0.285 6.285 17 C 0.090 3.910 18 C -0.236 4.236 19 C -0.196 4.196 20 C -0.237 4.237 21 C -0.202 4.202 22 C -0.163 4.163 23 C -0.072 4.072 24 C -0.144 4.144 25 O -0.365 6.365 26 Si 0.664 3.336 27 O -0.072 6.072 28 H 0.116 0.884 29 H 0.117 0.883 30 H 0.110 0.890 31 H 0.255 0.745 32 H 0.117 0.883 33 H 0.156 0.844 34 H 0.103 0.897 35 H 0.123 0.877 36 H 0.251 0.749 37 H 0.080 0.920 38 H 0.106 0.894 39 H 0.085 0.915 40 H 0.087 0.913 41 H 0.118 0.882 42 H 0.088 0.912 43 H 0.084 0.916 44 H 0.107 0.893 45 H 0.079 0.921 46 H 0.140 0.860 47 H 0.097 0.903 48 H 0.199 0.801 49 H 0.150 0.850 50 H 0.259 0.741 51 H -0.242 1.242 52 H -0.188 1.188 Dipole moment (debyes) X Y Z Total from point charges 3.122 -2.772 1.906 4.589 hybrid contribution 0.774 0.357 -0.848 1.203 sum 3.896 -2.415 1.057 4.704 Atomic orbital electron populations 1.20582 0.82461 1.05094 1.05051 1.23246 0.94808 0.82988 0.95974 1.21214 0.94221 0.93493 1.18415 1.17359 0.85266 0.84380 0.74942 1.90785 1.18037 1.84580 1.51958 1.45541 1.10105 1.04780 1.74524 1.22396 0.99796 0.79351 0.96662 0.88008 1.23969 1.02030 0.93083 0.98770 1.21870 0.84748 0.87819 0.98755 1.92879 1.59089 1.72171 1.93394 1.21882 0.95058 0.90660 0.91277 1.44563 1.10101 1.38658 1.43139 1.18218 0.84368 0.78881 0.78510 1.90910 1.15779 1.72230 1.69047 1.86319 1.41923 1.47910 1.52392 1.22390 0.86726 0.89912 0.91996 1.22473 0.99975 1.00658 1.00538 1.21898 1.02029 0.97811 0.97814 1.22475 1.00957 1.00609 0.99670 1.24220 1.04196 0.93850 0.97907 1.22791 0.96463 0.93448 1.03598 1.21484 0.82232 0.95028 1.08486 1.23914 0.90738 1.07574 0.92196 1.86503 1.43504 1.63201 1.43294 0.93692 0.80605 0.72478 0.86781 1.83659 1.16778 1.35197 1.71582 0.88396 0.88297 0.88995 0.74548 0.88257 0.84368 0.89651 0.87718 0.74912 0.91999 0.89378 0.91533 0.91316 0.88172 0.91248 0.91593 0.89331 0.92084 0.85989 0.90278 0.80068 0.84993 0.74102 1.24209 1.18821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.07 9.14 71.24 0.65 0.58 16 2 C 0.08 0.36 7.37 25.26 0.19 0.55 16 3 C -0.27 -1.07 6.31 -18.99 -0.12 -1.19 16 4 C 0.59 3.06 7.81 86.65 0.68 3.74 16 5 O -0.57 -6.80 15.26 -4.06 -0.06 -6.86 16 6 N -0.70 1.50 5.35 -443.33 -2.37 -0.87 16 7 C 0.12 -0.29 4.22 45.52 0.19 -0.09 16 8 H 0.10 0.31 7.46 -2.39 -0.02 0.30 16 9 C -0.14 1.04 7.29 31.12 0.23 1.27 16 10 C 0.09 -0.35 1.74 -10.27 -0.02 -0.37 16 11 F -0.19 -0.33 16.58 44.97 0.75 0.42 16 12 C 0.13 -0.40 5.43 86.38 0.47 0.07 16 13 N -0.70 -0.90 5.45 -590.85 -3.22 -4.12 16 14 C 0.65 4.35 8.06 129.79 1.05 5.39 16 15 O -0.59 -6.33 11.88 19.80 0.24 -6.10 16 16 O -0.37 -2.32 9.94 -55.47 -0.55 -2.87 16 17 C 0.13 0.40 1.13 -10.79 -0.01 0.39 16 18 C -0.18 -0.51 8.37 71.98 0.60 0.09 16 19 C -0.14 0.21 8.85 71.98 0.64 0.85 16 20 C -0.18 -0.58 8.37 71.98 0.60 0.02 16 21 C -0.16 0.63 7.32 31.12 0.23 0.85 16 22 C -0.14 -0.01 10.46 23.65 0.25 0.23 16 23 C -0.02 -0.03 6.24 24.76 0.15 0.12 16 24 C -0.04 0.14 2.97 71.24 0.21 0.35 16 25 O -0.55 1.22 12.84 -148.98 -1.91 -0.69 16 26 Si 0.76 -2.09 32.09 68.60 2.20 0.11 16 27 O -0.17 -0.68 8.89 4.48 0.04 -0.64 16 28 H 0.10 -0.31 8.14 -2.39 -0.02 -0.33 16 29 H 0.10 0.09 8.08 -2.39 -0.02 0.07 16 30 H 0.09 0.20 8.08 -2.39 -0.02 0.18 16 31 H 0.42 -3.33 7.90 -92.71 -0.73 -4.06 16 32 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 33 H 0.14 -1.79 8.08 -2.39 -0.02 -1.81 16 34 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 35 H 0.10 -0.53 7.84 -2.39 -0.02 -0.55 16 36 H 0.41 -0.17 8.14 -92.70 -0.75 -0.92 16 37 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 38 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 39 H 0.07 0.50 5.88 -2.38 -0.01 0.49 16 40 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 41 H 0.10 -0.50 8.14 -2.39 -0.02 -0.52 16 42 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 43 H 0.07 0.53 5.88 -2.38 -0.01 0.51 16 44 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 45 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 46 H 0.12 -0.83 7.90 -2.38 -0.02 -0.85 16 47 H 0.08 -0.07 8.14 -2.39 -0.02 -0.09 16 48 H 0.18 -1.08 7.74 -2.91 -0.02 -1.10 16 49 H 0.13 -1.40 7.96 -2.39 -0.02 -1.42 16 50 H 0.41 -4.46 8.74 -74.06 -0.65 -5.10 16 51 H -0.31 -2.42 7.11 99.48 0.71 -1.72 16 52 H -0.26 0.27 7.11 99.48 0.71 0.98 16 Total: 0.00 -25.72 432.82 -0.04 -25.75 By element: Atomic # 1 Polarization: -15.85 SS G_CDS: -1.12 Total: -16.97 kcal Atomic # 6 Polarization: 6.87 SS G_CDS: 5.98 Total: 12.85 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -5.60 Total: -4.99 kcal Atomic # 8 Polarization: -14.91 SS G_CDS: -2.25 Total: -17.16 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.75 Total: 0.42 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: 2.20 Total: 0.11 kcal Total: -25.72 -0.04 -25.75 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734572_13308374.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.744 kcal (2) G-P(sol) polarization free energy of solvation -25.716 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.035 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -151.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds