Wall clock time and date at job start Thu Mar 4 2021 16:12:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53003 * 109.47105 * 2 1 4 4 C 1.53001 * 109.47296 * 239.99698 * 2 1 3 5 5 O 1.45198 * 109.47365 * 119.99710 * 2 1 3 6 6 C 1.34635 * 117.00190 * 60.00159 * 5 2 1 7 7 O 1.21509 * 119.99709 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00297 * 179.97438 * 6 5 2 9 9 C 1.46504 * 119.99884 * 179.97438 * 8 6 5 10 10 C 1.53004 * 109.46768 * 180.02562 * 9 8 6 11 11 F 1.39903 * 112.90714 * 316.24617 * 10 9 8 12 12 C 1.53773 * 113.61838 * 87.50228 * 10 9 8 13 13 C 1.53783 * 87.08406 * 139.97695 * 12 10 9 14 14 H 1.09005 * 113.68671 * 89.12236 * 13 12 10 15 15 N 1.46489 * 113.61822 * 220.01951 * 13 12 10 16 16 C 1.34783 * 120.00303 * 252.49566 * 15 13 12 17 17 O 1.21595 * 119.99568 * 0.02562 * 16 15 13 18 18 C 1.47530 * 120.00313 * 179.97438 * 16 15 13 19 19 C 1.40135 * 120.19305 * 180.02562 * 18 16 15 20 20 O 1.35656 * 120.14992 * 0.02562 * 19 18 16 21 21 C 1.38711 * 119.70259 * 179.97438 * 19 18 16 22 22 C 1.38054 * 120.08011 * 0.25849 * 21 19 18 23 23 C 1.50696 * 119.80282 * 179.74486 * 22 21 19 24 24 O 1.42897 * 109.47232 * 299.99698 * 23 22 21 25 25 Si 1.86305 * 109.47281 * 179.97438 * 23 22 21 26 26 C 1.38546 * 120.39080 * 359.48305 * 22 21 19 27 27 C 1.37783 * 120.30152 * 0.51910 * 26 22 21 28 28 C 1.53781 * 113.60996 * 185.00194 * 10 9 8 29 29 H 1.08999 * 109.47054 * 299.99701 * 1 2 3 30 30 H 1.08998 * 109.47290 * 60.00720 * 1 2 3 31 31 H 1.09006 * 109.46543 * 180.02562 * 1 2 3 32 32 H 1.08994 * 109.47300 * 180.02562 * 3 2 1 33 33 H 1.08998 * 109.46459 * 299.99789 * 3 2 1 34 34 H 1.08998 * 109.47380 * 59.99598 * 3 2 1 35 35 H 1.08998 * 109.47338 * 300.00035 * 4 2 1 36 36 H 1.09001 * 109.46829 * 60.00174 * 4 2 1 37 37 H 1.09002 * 109.47063 * 179.97438 * 4 2 1 38 38 H 0.96996 * 120.00171 * 0.02562 * 8 6 5 39 39 H 1.08993 * 109.47148 * 60.00671 * 9 8 6 40 40 H 1.09000 * 109.47272 * 299.99938 * 9 8 6 41 41 H 1.08998 * 113.61650 * 25.43230 * 12 10 9 42 42 H 1.09001 * 113.61897 * 254.52806 * 12 10 9 43 43 H 0.97006 * 120.00518 * 72.49640 * 15 13 12 44 44 H 0.96700 * 114.00112 * 269.97817 * 20 19 18 45 45 H 1.08002 * 119.95700 * 179.97438 * 21 19 18 46 46 H 1.09000 * 109.47321 * 59.99889 * 23 22 21 47 47 H 0.96700 * 114.00383 * 180.02562 * 24 23 22 48 48 H 1.48500 * 109.99980 * 298.68173 * 25 23 22 49 49 H 1.48499 * 109.99891 * 59.99718 * 25 23 22 50 50 H 1.07998 * 119.85013 * 180.26256 * 26 22 21 51 51 H 1.07997 * 120.04687 * 179.76849 * 27 26 22 52 52 H 1.09003 * 113.61665 * 105.47128 * 28 10 9 53 53 H 1.08997 * 113.69472 * 334.57424 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9510 -2.5094 0.5042 8 7 2.0682 -2.6656 2.4168 9 6 1.6741 -4.0668 2.5833 10 6 2.2744 -4.6147 3.8796 11 9 3.6102 -4.2408 4.0618 12 6 1.3932 -4.3740 5.1166 13 6 1.7829 -5.7900 5.5725 14 1 2.6890 -5.8214 6.1775 15 7 0.6748 -6.5405 6.1682 16 6 0.6486 -6.7624 7.4974 17 8 1.5445 -6.3391 8.2021 18 6 -0.4677 -7.5177 8.0974 19 6 -0.4992 -7.7502 9.4789 20 8 0.4967 -7.2811 10.2717 21 6 -1.5539 -8.4612 10.0324 22 6 -2.5644 -8.9415 9.2237 23 6 -3.7043 -9.7181 9.8308 24 8 -3.1938 -10.8846 10.4795 25 14 -4.8952 -10.2234 8.4902 26 6 -2.5396 -8.7092 7.8581 27 6 -1.4997 -8.0050 7.2915 28 6 2.0212 -6.1170 4.0888 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3633 -1.0278 0.0005 32 1 3.1299 1.4426 -0.0005 33 1 1.6766 1.9562 -0.8900 34 1 1.6766 1.9564 0.8899 35 1 1.6767 -1.7490 -1.2492 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7209 -1.2494 38 1 2.6278 -2.2367 3.0829 39 1 2.0399 -4.6499 1.7383 40 1 0.5873 -4.1356 2.6291 41 1 0.3338 -4.2664 4.8838 42 1 1.7657 -3.5864 5.7716 43 1 -0.0402 -6.8779 5.6061 44 1 1.2326 -7.8981 10.3854 45 1 -1.5821 -8.6431 11.0966 46 1 -4.2216 -9.0941 10.5596 47 1 -3.8736 -11.4338 10.8934 48 1 -5.4573 -9.0181 7.8294 49 1 -4.2023 -11.0744 7.4897 50 1 -3.3369 -9.0854 7.2342 51 1 -1.4826 -7.8295 6.2260 52 1 2.9008 -6.7366 3.9142 53 1 1.1339 -6.4873 3.5754 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734572_13422076.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:12:24 Heat of formation + Delta-G solvation = -178.615559 kcal Electronic energy + Delta-G solvation = -37133.620953 eV Core-core repulsion = 31887.917710 eV Total energy + Delta-G solvation = -5245.703243 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.183 amu Computer time = 1.72 seconds Orbital eigenvalues (eV) -48.96340 -41.88305 -41.79118 -40.46659 -39.19480 -38.48849 -38.23860 -37.23603 -36.03221 -35.05475 -34.47020 -32.73739 -31.26106 -29.33118 -28.39644 -28.33662 -27.55469 -27.13754 -24.65652 -23.98805 -23.41549 -22.68130 -21.68984 -21.47770 -20.85685 -19.39162 -19.37684 -18.79384 -18.44761 -18.06874 -17.72465 -17.47036 -17.13901 -17.02012 -16.70516 -16.60072 -16.35728 -16.17640 -15.88189 -15.66197 -15.55539 -15.48601 -15.30387 -15.19436 -14.70756 -14.60825 -14.48673 -14.18664 -14.12464 -14.00419 -13.61229 -13.43666 -13.39486 -13.15035 -13.04311 -12.95932 -12.94416 -12.90664 -12.82005 -12.53625 -12.51721 -12.39479 -12.11495 -11.87344 -11.81490 -11.53874 -11.43810 -11.19441 -10.99853 -10.50107 -10.38087 -10.26631 -10.07290 -9.89776 -4.90033 -0.54095 -0.00147 1.04493 1.27838 1.55843 1.66284 1.69620 1.91443 1.96314 2.42006 2.86699 2.93414 3.02786 3.09297 3.18572 3.25068 3.45843 3.50174 3.52651 3.62565 3.70469 3.72725 3.76095 3.90938 4.00914 4.13653 4.18096 4.25474 4.29615 4.43312 4.49472 4.53509 4.54448 4.56138 4.58635 4.63844 4.70472 4.73567 4.74834 4.81266 4.83338 4.83785 4.84316 4.94349 5.00350 5.06950 5.11053 5.16160 5.24053 5.29637 5.34592 5.44538 5.50161 6.22505 6.34963 6.62063 6.86714 7.04753 7.21521 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.126 3.874 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.589 6.589 8 N -0.705 5.705 9 C 0.134 3.866 10 C 0.087 3.913 11 F -0.196 7.196 12 C -0.163 4.163 13 C 0.122 3.878 14 H 0.099 0.901 15 N -0.700 5.700 16 C 0.560 3.440 17 O -0.559 6.559 18 C -0.182 4.182 19 C 0.159 3.841 20 O -0.494 6.494 21 C -0.137 4.137 22 C -0.040 4.040 23 C -0.091 4.091 24 O -0.563 6.563 25 Si 0.778 3.222 26 C -0.155 4.155 27 C -0.051 4.051 28 C -0.140 4.140 29 H 0.061 0.939 30 H 0.088 0.912 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.100 0.900 34 H 0.069 0.931 35 H 0.065 0.935 36 H 0.088 0.912 37 H 0.060 0.940 38 H 0.414 0.586 39 H 0.086 0.914 40 H 0.107 0.893 41 H 0.125 0.875 42 H 0.077 0.923 43 H 0.417 0.583 44 H 0.409 0.591 45 H 0.144 0.856 46 H 0.097 0.903 47 H 0.406 0.594 48 H -0.281 1.281 49 H -0.288 1.288 50 H 0.138 0.862 51 H 0.170 0.830 52 H 0.098 0.902 53 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.927 -3.669 -1.353 7.955 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.090 3.910 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.401 3.599 7 O -0.479 6.479 8 N -0.365 5.365 9 C 0.012 3.988 10 C 0.068 3.932 11 F -0.176 7.176 12 C -0.202 4.202 13 C 0.016 3.984 14 H 0.117 0.883 15 N -0.353 5.353 16 C 0.348 3.652 17 O -0.438 6.438 18 C -0.186 4.186 19 C 0.113 3.887 20 O -0.308 6.308 21 C -0.155 4.155 22 C -0.040 4.040 23 C -0.200 4.200 24 O -0.374 6.374 25 Si 0.682 3.318 26 C -0.172 4.172 27 C -0.069 4.069 28 C -0.178 4.178 29 H 0.080 0.920 30 H 0.106 0.894 31 H 0.085 0.915 32 H 0.087 0.913 33 H 0.118 0.882 34 H 0.088 0.912 35 H 0.084 0.916 36 H 0.107 0.893 37 H 0.079 0.921 38 H 0.251 0.749 39 H 0.104 0.896 40 H 0.125 0.875 41 H 0.143 0.857 42 H 0.095 0.905 43 H 0.256 0.744 44 H 0.269 0.731 45 H 0.161 0.839 46 H 0.115 0.885 47 H 0.258 0.742 48 H -0.207 1.207 49 H -0.216 1.216 50 H 0.155 0.845 51 H 0.187 0.813 52 H 0.117 0.883 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -6.557 -2.800 -2.314 7.496 hybrid contribution 1.140 0.136 0.486 1.247 sum -5.417 -2.664 -1.828 6.307 Atomic orbital electron populations 1.22471 0.93748 1.03854 1.03565 1.22393 0.94679 0.92524 0.81422 1.21900 1.02406 0.90982 1.04284 1.22478 1.01578 1.02335 0.97333 1.86321 1.71552 1.23274 1.47423 1.18211 0.78710 0.80838 0.82187 1.90908 1.42095 1.70944 1.43994 1.44565 1.55571 1.12703 1.23670 1.21883 1.01591 0.79042 0.96332 1.21880 0.77886 0.98090 0.95385 1.92880 1.35892 1.92557 1.96281 1.24231 1.02073 0.98305 0.95573 1.22399 0.90702 0.91347 0.93921 0.88308 1.45657 1.26331 1.56451 1.06823 1.18238 0.85142 0.79068 0.82758 1.90823 1.39160 1.51972 1.61865 1.20428 0.98376 1.05860 0.93946 1.18758 0.90100 0.91934 0.87958 1.84704 1.31950 1.46181 1.67930 1.21386 0.94373 0.98035 1.01744 1.19861 0.95383 0.95468 0.93335 1.25026 0.98860 0.89794 1.06327 1.86429 1.39467 1.36212 1.75255 0.93984 0.81288 0.80600 0.75947 1.21040 0.99974 1.01976 0.94220 1.21412 0.90928 0.93595 1.00962 1.23979 1.06325 0.93416 0.94085 0.91980 0.89358 0.91509 0.91341 0.88154 0.91242 0.91584 0.89313 0.92114 0.74940 0.89625 0.87537 0.85650 0.90452 0.74394 0.73054 0.83851 0.88539 0.74241 1.20745 1.21567 0.84523 0.81316 0.88312 0.84084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 2 C 0.13 0.39 1.13 -10.79 -0.01 0.38 16 3 C -0.14 0.21 8.85 71.98 0.64 0.85 16 4 C -0.18 -0.57 8.37 71.98 0.60 0.03 16 5 O -0.37 -2.31 9.94 -55.44 -0.55 -2.86 16 6 C 0.65 4.26 8.06 129.79 1.05 5.31 16 7 O -0.59 -6.20 11.88 19.81 0.24 -5.96 16 8 N -0.70 -0.83 5.46 -590.85 -3.22 -4.05 16 9 C 0.13 -0.44 5.43 86.38 0.47 0.03 16 10 C 0.09 -0.35 1.74 -10.27 -0.02 -0.37 16 11 F -0.20 -0.39 16.58 44.97 0.75 0.35 16 12 C -0.16 0.63 7.32 31.12 0.23 0.86 16 13 C 0.12 -0.27 4.22 45.52 0.19 -0.08 16 14 H 0.10 0.38 7.46 -2.38 -0.02 0.36 16 15 N -0.70 1.93 5.30 -443.20 -2.35 -0.42 16 16 C 0.56 3.16 7.76 86.69 0.67 3.83 16 17 O -0.56 -7.93 14.76 16.90 0.25 -7.68 16 18 C -0.18 -0.72 5.89 -20.01 -0.12 -0.84 16 19 C 0.16 1.04 6.72 22.84 0.15 1.20 16 20 O -0.49 -4.20 11.58 -68.80 -0.80 -5.00 16 21 C -0.14 -0.58 9.53 22.34 0.21 -0.37 16 22 C -0.04 -0.08 5.43 -19.84 -0.11 -0.18 16 23 C -0.09 0.31 2.80 71.23 0.20 0.51 16 24 O -0.56 1.60 12.74 -148.98 -1.90 -0.29 16 25 Si 0.78 -4.63 29.77 68.60 2.04 -2.59 16 26 C -0.15 -0.02 8.64 22.24 0.19 0.17 16 27 C -0.05 0.09 9.54 22.52 0.21 0.30 16 28 C -0.14 1.08 7.29 31.12 0.23 1.30 16 29 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 31 H 0.07 0.49 5.88 -2.38 -0.01 0.47 16 32 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.10 -0.51 8.14 -2.39 -0.02 -0.53 16 34 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 35 H 0.07 0.52 5.88 -2.39 -0.01 0.51 16 36 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 38 H 0.41 -0.14 8.14 -92.71 -0.75 -0.89 16 39 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 40 H 0.11 -0.62 7.84 -2.39 -0.02 -0.64 16 41 H 0.13 -0.95 7.89 -2.39 -0.02 -0.97 16 42 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 43 H 0.42 -4.13 6.76 -92.70 -0.63 -4.75 16 44 H 0.41 0.62 9.06 -74.06 -0.67 -0.05 16 45 H 0.14 0.43 8.06 -2.91 -0.02 0.41 16 46 H 0.10 -0.65 7.96 -2.39 -0.02 -0.67 16 47 H 0.41 -5.36 8.74 -74.06 -0.65 -6.00 16 48 H -0.28 0.39 7.11 99.48 0.71 1.10 16 49 H -0.29 -0.19 7.11 99.48 0.71 0.52 16 50 H 0.14 -0.32 4.85 -2.91 -0.01 -0.33 16 51 H 0.17 -1.70 6.40 -2.91 -0.02 -1.72 16 52 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 53 H 0.14 -1.95 8.08 -2.39 -0.02 -1.97 16 Total: 0.00 -29.92 433.73 -1.81 -31.73 By element: Atomic # 1 Polarization: -14.62 SS G_CDS: -1.66 Total: -16.28 kcal Atomic # 6 Polarization: 7.65 SS G_CDS: 5.39 Total: 13.05 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -5.57 Total: -4.47 kcal Atomic # 8 Polarization: -19.03 SS G_CDS: -2.76 Total: -21.79 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.75 Total: 0.35 kcal Atomic # 14 Polarization: -4.63 SS G_CDS: 2.04 Total: -2.59 kcal Total: -29.92 -1.81 -31.73 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734572_13422076.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.888 kcal (2) G-P(sol) polarization free energy of solvation -29.918 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.805 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.728 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.72 seconds