Wall clock time and date at job start Thu Mar 4 2021 16:12:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.46997 * 2 1 4 4 C 1.52998 * 109.47021 * 239.99781 * 2 1 3 5 5 O 1.45205 * 109.46911 * 119.99874 * 2 1 3 6 6 C 1.34636 * 116.99806 * 60.00322 * 5 2 1 7 7 O 1.21513 * 120.00153 * 359.97438 * 6 5 2 8 8 N 1.34777 * 119.99531 * 179.97438 * 6 5 2 9 9 C 1.46499 * 119.99665 * 179.72227 * 8 6 5 10 10 C 1.53004 * 109.47198 * 180.27868 * 9 8 6 11 11 F 1.39897 * 112.84783 * 316.19675 * 10 9 8 12 12 C 1.53787 * 113.61355 * 87.50373 * 10 9 8 13 13 C 1.53783 * 87.08023 * 139.98452 * 12 10 9 14 14 H 1.08995 * 113.61720 * 89.11229 * 13 12 10 15 15 N 1.46497 * 113.68497 * 220.00672 * 13 12 10 16 16 C 1.34776 * 120.00055 * 252.52979 * 15 13 12 17 17 O 1.21285 * 119.99678 * 0.02562 * 16 15 13 18 18 C 1.50696 * 120.00228 * 180.02562 * 16 15 13 19 19 C 1.50695 * 109.47322 * 180.02562 * 18 16 15 20 20 C 1.34850 * 125.89101 * 274.68896 * 19 18 16 21 21 C 1.40894 * 107.41931 * 179.88312 * 20 19 18 22 22 C 1.34846 * 107.41488 * 0.38046 * 21 20 19 23 23 C 1.50700 * 125.88952 * 179.80138 * 22 21 20 24 24 O 1.42903 * 109.47340 * 244.95642 * 23 22 21 25 25 Si 1.86301 * 109.47122 * 4.96284 * 23 22 21 26 26 N 1.36340 * 125.89329 * 94.99643 * 19 18 16 27 27 C 1.53782 * 113.61417 * 185.00090 * 10 9 8 28 28 H 1.08999 * 109.46874 * 299.99879 * 1 2 3 29 29 H 1.08996 * 109.47160 * 59.99677 * 1 2 3 30 30 H 1.08994 * 109.47124 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47127 * 179.97438 * 3 2 1 32 32 H 1.09001 * 109.46984 * 299.99604 * 3 2 1 33 33 H 1.08999 * 109.47210 * 60.00327 * 3 2 1 34 34 H 1.09000 * 109.47347 * 300.00334 * 4 2 1 35 35 H 1.09001 * 109.46931 * 59.99857 * 4 2 1 36 36 H 1.09004 * 109.46918 * 179.97438 * 4 2 1 37 37 H 0.97001 * 120.00485 * 0.02562 * 8 6 5 38 38 H 1.09009 * 109.47454 * 300.27637 * 9 8 6 39 39 H 1.08998 * 109.47492 * 60.27932 * 9 8 6 40 40 H 1.08998 * 113.61128 * 254.53330 * 12 10 9 41 41 H 1.08998 * 113.61325 * 25.42994 * 12 10 9 42 42 H 0.97005 * 120.00197 * 72.54161 * 15 13 12 43 43 H 1.09006 * 109.46955 * 300.00330 * 18 16 15 44 44 H 1.09009 * 109.47290 * 59.99992 * 18 16 15 45 45 H 1.08005 * 126.29039 * 0.02562 * 20 19 18 46 46 H 1.07999 * 126.29188 * 180.12949 * 21 20 19 47 47 H 1.09000 * 109.47195 * 124.95629 * 23 22 21 48 48 H 0.96701 * 113.99738 * 179.97438 * 24 23 22 49 49 H 1.48501 * 110.00130 * 178.68205 * 25 23 22 50 50 H 1.48505 * 109.99496 * 299.99607 * 25 23 22 51 51 H 0.96996 * 125.63849 * 359.96325 * 26 19 18 52 52 H 1.09001 * 113.61616 * 334.56263 * 27 10 9 53 53 H 1.09000 * 113.61435 * 105.38746 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3383 7 8 0.9509 -2.5095 0.5040 8 7 2.0680 -2.6657 2.4167 9 6 1.6694 -4.0652 2.5860 10 6 2.2654 -4.6117 3.8849 11 9 3.6022 -4.2417 4.0671 12 6 1.3822 -4.3652 5.1195 13 6 1.7668 -5.7812 5.5798 14 1 2.6717 -5.8124 6.1865 15 7 0.6563 -6.5282 6.1756 16 6 0.6274 -6.7463 7.5053 17 8 1.5206 -6.3237 8.2086 18 6 -0.5145 -7.5153 8.1181 19 6 -0.3091 -7.6179 9.6075 20 6 0.4252 -8.5546 10.2415 21 6 0.3536 -8.2833 11.6222 22 6 -0.4285 -7.1963 11.7799 23 6 -0.7873 -6.5489 13.0927 24 8 -2.1931 -6.6734 13.3168 25 14 0.1387 -7.3899 14.4733 26 7 -0.8383 -6.7834 10.5468 27 6 2.0072 -6.1127 4.0974 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6766 -1.7489 -1.2492 35 1 1.6766 -0.2075 -2.1392 36 1 3.1300 -0.7209 -1.2494 37 1 2.6276 -2.2368 3.0830 38 1 0.5822 -4.1307 2.6293 39 1 2.0354 -4.6517 1.7433 40 1 1.7557 -3.5770 5.7732 41 1 0.3236 -4.2549 4.8841 42 1 -0.0581 -6.8661 5.6131 43 1 -1.4518 -6.9967 7.9159 44 1 -0.5523 -8.5155 7.6864 45 1 0.9701 -9.3627 9.7762 46 1 0.8334 -8.8453 12.4098 47 1 -0.5161 -5.4936 13.0635 48 1 -2.4957 -6.2783 14.1459 49 1 -0.1820 -6.7402 15.7696 50 1 -0.2224 -8.8296 14.5237 51 1 -1.4113 -6.0216 10.3675 52 1 1.1194 -6.4802 3.5827 53 1 2.8849 -6.7355 3.9247 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734572_14644196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:12:58 Heat of formation + Delta-G solvation = -126.433916 kcal Electronic energy + Delta-G solvation = -35082.110377 eV Core-core repulsion = 30064.614703 eV Total energy + Delta-G solvation = -5017.495674 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -48.91836 -42.31826 -41.84421 -40.88086 -39.23010 -38.33623 -37.83247 -35.99704 -34.99301 -34.27346 -33.00602 -31.94342 -29.80808 -28.86861 -28.38242 -28.32205 -27.07156 -25.39505 -24.08949 -22.92341 -21.82009 -21.43649 -21.34106 -21.08662 -20.66887 -19.35593 -18.62804 -18.31469 -18.07793 -17.88089 -17.44559 -17.34135 -16.98518 -16.56877 -16.26160 -16.04951 -15.96406 -15.74972 -15.47244 -15.30069 -15.03812 -14.94943 -14.70427 -14.63447 -14.47160 -14.32602 -14.13661 -14.00096 -13.65002 -13.49264 -13.38316 -13.31884 -13.13087 -13.02640 -12.94028 -12.89225 -12.81018 -12.74487 -12.50122 -12.43239 -12.37699 -11.95255 -11.74611 -11.47967 -11.41978 -11.17412 -10.96002 -10.61748 -10.34832 -10.08868 -9.80434 -8.96138 -4.87109 1.06115 1.09082 1.26089 1.60554 1.61133 1.68447 1.85583 1.94725 2.28000 2.49593 2.91435 3.00973 3.14816 3.24806 3.35960 3.56430 3.58991 3.69294 3.71943 3.77491 3.91083 3.92361 4.03587 4.22504 4.26267 4.29360 4.36307 4.48079 4.48878 4.56067 4.57382 4.59953 4.61242 4.64535 4.72761 4.74915 4.80538 4.80806 4.84486 4.85649 4.89032 5.00169 5.12964 5.19018 5.23723 5.25463 5.30241 5.31361 5.48751 5.52079 5.99828 6.12067 6.24861 6.50780 6.54665 6.68424 7.23752 7.27820 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.126 3.874 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.647 3.353 7 O -0.589 6.589 8 N -0.705 5.705 9 C 0.134 3.866 10 C 0.083 3.917 11 F -0.198 7.198 12 C -0.161 4.161 13 C 0.123 3.877 14 H 0.093 0.907 15 N -0.704 5.704 16 C 0.513 3.487 17 O -0.574 6.574 18 C -0.067 4.067 19 C 0.034 3.966 20 C -0.200 4.200 21 C -0.205 4.205 22 C 0.017 3.983 23 C -0.062 4.062 24 O -0.562 6.562 25 Si 0.782 3.218 26 N -0.538 5.538 27 C -0.140 4.140 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.066 0.934 31 H 0.067 0.933 32 H 0.100 0.900 33 H 0.069 0.931 34 H 0.065 0.935 35 H 0.088 0.912 36 H 0.060 0.940 37 H 0.414 0.586 38 H 0.107 0.893 39 H 0.083 0.917 40 H 0.074 0.926 41 H 0.127 0.873 42 H 0.422 0.578 43 H 0.130 0.870 44 H 0.145 0.855 45 H 0.144 0.856 46 H 0.147 0.853 47 H 0.088 0.912 48 H 0.396 0.604 49 H -0.277 1.277 50 H -0.297 1.297 51 H 0.419 0.581 52 H 0.141 0.859 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.730 1.249 -2.582 3.960 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.090 3.910 3 C -0.196 4.196 4 C -0.238 4.238 5 O -0.286 6.286 6 C 0.400 3.600 7 O -0.480 6.480 8 N -0.365 5.365 9 C 0.011 3.989 10 C 0.064 3.936 11 F -0.178 7.178 12 C -0.200 4.200 13 C 0.017 3.983 14 H 0.111 0.889 15 N -0.357 5.357 16 C 0.300 3.700 17 O -0.452 6.452 18 C -0.107 4.107 19 C -0.080 4.080 20 C -0.225 4.225 21 C -0.230 4.230 22 C -0.096 4.096 23 C -0.171 4.171 24 O -0.372 6.372 25 Si 0.685 3.315 26 N -0.133 5.133 27 C -0.179 4.179 28 H 0.081 0.919 29 H 0.106 0.894 30 H 0.085 0.915 31 H 0.086 0.914 32 H 0.118 0.882 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.107 0.893 36 H 0.079 0.921 37 H 0.250 0.750 38 H 0.125 0.875 39 H 0.102 0.898 40 H 0.093 0.907 41 H 0.145 0.855 42 H 0.261 0.739 43 H 0.148 0.852 44 H 0.163 0.837 45 H 0.161 0.839 46 H 0.164 0.836 47 H 0.106 0.894 48 H 0.247 0.753 49 H -0.203 1.203 50 H -0.224 1.224 51 H 0.257 0.743 52 H 0.159 0.841 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.541 0.748 -2.388 3.567 hybrid contribution -1.044 0.820 0.380 1.381 sum -3.585 1.567 -2.008 4.398 Atomic orbital electron populations 1.22470 0.93733 1.03866 1.03564 1.22383 0.94678 0.92495 0.81412 1.21902 1.02401 0.91010 1.04280 1.22481 1.01574 1.02351 0.97357 1.86322 1.71576 1.23303 1.47393 1.18221 0.78711 0.80821 0.82223 1.90910 1.42119 1.70935 1.43986 1.44573 1.55455 1.12830 1.23630 1.21896 1.01598 0.79014 0.96374 1.21945 0.77830 0.98381 0.95453 1.92874 1.35967 1.92688 1.96291 1.24208 1.01963 0.98443 0.95344 1.22272 0.91044 0.91324 0.93652 0.88894 1.45733 1.26017 1.56629 1.07285 1.21014 0.87307 0.79213 0.82451 1.90768 1.40168 1.52169 1.62138 1.20265 0.98037 1.04531 0.87841 1.19962 1.02593 0.94377 0.91087 1.20846 1.05349 1.02721 0.93568 1.20878 1.05541 0.98980 0.97592 1.19871 1.04014 0.99984 0.85711 1.24648 0.87052 1.04837 1.00526 1.86538 1.21777 1.82953 1.45934 0.93379 0.89324 0.76061 0.72738 1.41859 1.40403 1.25720 1.05317 1.23971 1.06142 0.93169 0.94573 0.91937 0.89408 0.91484 0.91358 0.88186 0.91215 0.91571 0.89345 0.92130 0.74964 0.87476 0.89842 0.90728 0.85519 0.73925 0.85232 0.83697 0.83851 0.83594 0.89379 0.75279 1.20344 1.22444 0.74335 0.84056 0.88716 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.36 8.37 71.98 0.60 0.24 16 2 C 0.13 0.32 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.49 8.37 71.98 0.60 0.12 16 5 O -0.37 -2.04 9.94 -55.45 -0.55 -2.59 16 6 C 0.65 3.75 8.06 129.79 1.05 4.80 16 7 O -0.59 -5.78 11.88 19.80 0.24 -5.54 16 8 N -0.70 -0.20 5.45 -590.84 -3.22 -3.42 16 9 C 0.13 -0.57 5.42 86.38 0.47 -0.11 16 10 C 0.08 -0.44 1.74 -10.26 -0.02 -0.46 16 11 F -0.20 -0.25 16.58 44.97 0.75 0.50 16 12 C -0.16 0.98 7.33 31.12 0.23 1.21 16 13 C 0.12 -0.58 4.22 45.52 0.19 -0.39 16 14 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 15 N -0.70 5.36 5.36 -440.03 -2.36 3.00 16 16 C 0.51 -0.37 7.82 87.66 0.69 0.32 16 17 O -0.57 -6.03 15.63 -3.05 -0.05 -6.08 16 18 C -0.07 0.38 6.24 29.10 0.18 0.56 16 19 C 0.03 0.11 5.66 41.08 0.23 0.34 16 20 C -0.20 -1.27 10.76 22.14 0.24 -1.04 16 21 C -0.21 -1.49 9.37 22.14 0.21 -1.28 16 22 C 0.02 0.11 6.53 41.08 0.27 0.38 16 23 C -0.06 -0.12 3.07 71.24 0.22 0.10 16 24 O -0.56 -1.74 12.86 -148.98 -1.92 -3.66 16 25 Si 0.78 0.31 30.60 68.60 2.10 2.41 16 26 N -0.54 -2.05 6.07 -171.13 -1.04 -3.09 16 27 C -0.14 1.29 7.29 31.12 0.23 1.51 16 28 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 29 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 30 H 0.07 0.44 5.88 -2.39 -0.01 0.43 16 31 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 32 H 0.10 -0.56 8.14 -2.39 -0.02 -0.58 16 33 H 0.07 -0.16 8.14 -2.39 -0.02 -0.17 16 34 H 0.07 0.49 5.88 -2.39 -0.01 0.48 16 35 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 36 H 0.06 0.15 8.14 -2.38 -0.02 0.13 16 37 H 0.41 -0.51 8.14 -92.71 -0.75 -1.26 16 38 H 0.11 -0.75 7.84 -2.38 -0.02 -0.77 16 39 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 40 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 41 H 0.13 -1.29 7.90 -2.39 -0.02 -1.31 16 42 H 0.42 -6.43 8.73 -92.70 -0.81 -7.24 16 43 H 0.13 -1.49 8.14 -2.38 -0.02 -1.50 16 44 H 0.15 -1.58 8.14 -2.38 -0.02 -1.60 16 45 H 0.14 0.53 8.06 -2.91 -0.02 0.50 16 46 H 0.15 0.66 6.24 -2.91 -0.02 0.64 16 47 H 0.09 -0.16 7.96 -2.39 -0.02 -0.17 16 48 H 0.40 -2.09 8.74 -74.06 -0.65 -2.74 16 49 H -0.28 -0.79 7.11 99.48 0.71 -0.08 16 50 H -0.30 -2.35 7.11 99.48 0.71 -1.64 16 51 H 0.42 -0.17 8.96 -92.71 -0.83 -1.00 16 52 H 0.14 -2.17 8.08 -2.39 -0.02 -2.18 16 53 H 0.09 -0.74 8.14 -2.39 -0.02 -0.76 16 Total: 0.00 -30.30 436.40 -2.07 -32.37 By element: Atomic # 1 Polarization: -19.42 SS G_CDS: -2.02 Total: -21.44 kcal Atomic # 6 Polarization: 1.54 SS G_CDS: 6.01 Total: 7.54 kcal Atomic # 7 Polarization: 3.11 SS G_CDS: -6.62 Total: -3.51 kcal Atomic # 8 Polarization: -15.59 SS G_CDS: -2.28 Total: -17.87 kcal Atomic # 9 Polarization: -0.25 SS G_CDS: 0.75 Total: 0.50 kcal Atomic # 14 Polarization: 0.31 SS G_CDS: 2.10 Total: 2.41 kcal Total: -30.30 -2.07 -32.37 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734572_14644196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.063 kcal (2) G-P(sol) polarization free energy of solvation -30.299 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.072 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.371 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds