Wall clock time and date at job start Thu Mar 4 2021 16:15:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33813 * 122.45118 * 2 1 4 4 C 1.50700 * 124.51914 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47341 * 330.00033 * 4 3 2 6 6 Si 1.86300 * 109.46849 * 209.99919 * 4 3 2 7 7 S 1.70610 * 110.95442 * 180.28306 * 3 2 1 8 8 C 1.75828 * 91.56618 * 359.65833 * 7 3 2 9 9 C 1.46578 * 125.46277 * 180.02562 * 8 7 3 10 10 O 1.21709 * 120.00206 * 180.33371 * 9 8 7 11 11 N 1.34778 * 119.99730 * 0.33498 * 9 8 7 12 12 C 1.46502 * 119.99753 * 179.97438 * 11 9 8 13 13 H 1.08996 * 112.85131 * 334.66967 * 12 11 9 14 14 C 1.53782 * 113.61415 * 105.86628 * 12 11 9 15 15 C 1.53947 * 87.02109 * 139.95183 * 14 12 11 16 16 F 1.39903 * 113.54160 * 89.18677 * 15 14 12 17 17 C 1.52999 * 113.74257 * 220.05796 * 15 14 12 18 18 N 1.46502 * 109.46923 * 277.59729 * 17 15 14 19 19 C 1.34777 * 119.99963 * 180.02562 * 18 17 15 20 20 O 1.21509 * 120.00490 * 359.97438 * 19 18 17 21 21 O 1.34638 * 120.00176 * 179.97438 * 19 18 17 22 22 C 1.45201 * 117.00576 * 180.02562 * 21 19 18 23 23 C 1.52999 * 109.46919 * 59.99670 * 22 21 19 24 24 C 1.52992 * 109.47390 * 179.97438 * 22 21 19 25 25 C 1.53003 * 109.46703 * 299.99673 * 22 21 19 26 26 C 1.53781 * 87.11254 * 334.63384 * 15 14 12 27 27 C 1.36654 * 109.08071 * 0.33892 * 8 7 3 28 28 H 1.09003 * 109.46839 * 90.00352 * 1 2 3 29 29 H 1.08999 * 109.47445 * 209.99667 * 1 2 3 30 30 H 1.08997 * 109.47407 * 330.00347 * 1 2 3 31 31 H 1.09000 * 109.46989 * 90.00364 * 4 3 2 32 32 H 0.96693 * 114.00306 * 299.99773 * 5 4 3 33 33 H 1.48506 * 110.00048 * 58.68772 * 6 4 3 34 34 H 1.48502 * 109.99996 * 180.02562 * 6 4 3 35 35 H 0.96992 * 120.00176 * 359.97438 * 11 9 8 36 36 H 1.09007 * 113.60940 * 254.52821 * 14 12 11 37 37 H 1.09000 * 113.61305 * 25.42639 * 14 12 11 38 38 H 1.08998 * 109.47364 * 37.58894 * 17 15 14 39 39 H 1.09002 * 109.47786 * 157.59521 * 17 15 14 40 40 H 0.97002 * 120.00134 * 359.97438 * 18 17 15 41 41 H 1.08995 * 109.47301 * 60.00419 * 23 22 21 42 42 H 1.09005 * 109.46809 * 180.02562 * 23 22 21 43 43 H 1.09002 * 109.46958 * 300.00205 * 23 22 21 44 44 H 1.09007 * 109.47384 * 59.99696 * 24 22 21 45 45 H 1.09000 * 109.47320 * 179.97438 * 24 22 21 46 46 H 1.08995 * 109.47062 * 299.99722 * 24 22 21 47 47 H 1.09002 * 109.47249 * 59.99749 * 25 22 21 48 48 H 1.08998 * 109.46989 * 179.97438 * 25 22 21 49 49 H 1.09000 * 109.47315 * 300.00095 * 25 22 21 50 50 H 1.09001 * 113.61944 * 270.81753 * 26 15 14 51 51 H 1.09003 * 113.69244 * 139.92172 * 26 15 14 52 52 H 1.08001 * 123.35312 * 179.71815 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.3751 2.4982 -0.6726 6 14 2.7922 3.6828 -0.8778 7 16 3.8969 0.7891 -0.0079 8 6 3.5937 -0.9428 -0.0007 9 6 4.6230 -1.9863 -0.0024 10 8 4.3000 -3.1598 -0.0031 11 7 5.9272 -1.6464 -0.0031 12 6 6.9560 -2.6894 -0.0041 13 1 6.6072 -3.6284 0.4254 14 6 7.6620 -2.8568 -1.3600 15 6 8.9687 -3.0384 -0.5665 16 9 9.2281 -4.3672 -0.2137 17 6 10.1762 -2.3456 -1.2012 18 7 10.7315 -3.1997 -2.2540 19 6 11.8079 -2.7916 -2.9550 20 8 12.3175 -1.7152 -2.7141 21 8 12.3186 -3.5767 -3.9222 22 6 13.4788 -3.0735 -4.6358 23 6 14.6237 -2.8408 -3.6479 24 6 13.9135 -4.0958 -5.6877 25 6 13.1220 -1.7540 -5.3231 26 6 8.3092 -2.2205 0.5564 27 6 2.2445 -1.1601 -0.0004 28 1 -0.3633 -0.0001 -1.0277 29 1 -0.3634 -0.8900 0.5138 30 1 -0.3634 0.8900 0.5138 31 1 1.4938 2.8502 1.0284 32 1 0.4255 2.2100 -1.5942 33 1 3.0186 3.2206 -2.2708 34 1 2.2225 5.0542 -0.8836 35 1 6.1847 -0.7112 -0.0029 36 1 7.3538 -3.7489 -1.9055 37 1 7.6459 -1.9569 -1.9748 38 1 9.8642 -1.3943 -1.6321 39 1 10.9352 -2.1680 -0.4393 40 1 10.3250 -4.0592 -2.4461 41 1 14.8779 -3.7808 -3.1582 42 1 15.4945 -2.4626 -4.1835 43 1 14.3142 -2.1126 -2.8981 44 1 13.0979 -4.2622 -6.3916 45 1 14.7841 -3.7179 -6.2237 46 1 14.1678 -5.0356 -5.1977 47 1 12.8125 -1.0258 -4.5734 48 1 13.9930 -1.3760 -5.8584 49 1 12.3063 -1.9198 -6.0269 50 1 8.4703 -1.1462 0.4665 51 1 8.5220 -2.5982 1.5564 52 1 1.8018 -2.1452 -0.0009 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15734572_6739946.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 16:15:15 Heat of formation + Delta-G solvation = -137.432961 kcal Electronic energy + Delta-G solvation = -35242.047666 eV Core-core repulsion = 30250.427055 eV Total energy + Delta-G solvation = -4991.620612 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.155 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -48.90235 -41.82725 -41.21240 -40.06476 -39.21426 -38.33088 -37.40682 -35.99861 -35.02007 -34.33637 -32.11145 -30.24281 -29.30356 -28.36589 -28.31046 -27.10129 -26.69784 -24.80937 -23.79956 -22.78161 -21.86432 -21.41409 -20.82733 -20.16390 -19.42463 -19.28621 -18.11870 -17.75463 -17.44256 -17.34134 -17.30573 -16.95999 -16.59726 -16.52233 -16.30525 -16.05829 -15.70886 -15.66372 -15.45997 -15.29923 -15.05805 -14.70412 -14.55146 -14.45358 -14.43370 -14.09165 -13.90222 -13.57260 -13.51369 -13.36862 -13.16204 -13.11082 -13.05145 -12.92547 -12.87985 -12.86838 -12.79874 -12.48306 -12.41618 -12.36129 -12.24881 -11.84486 -11.77656 -11.50129 -11.40484 -11.27737 -11.14751 -10.88306 -10.35056 -10.27899 -9.67403 -9.36396 -5.11883 -0.67188 0.31086 0.70900 1.06763 1.08766 1.31809 1.55210 1.70860 1.89087 1.93382 2.03226 2.90235 2.97712 3.15702 3.23723 3.24873 3.51528 3.56277 3.57145 3.72618 3.73458 3.78997 3.93829 4.09715 4.22735 4.28748 4.33448 4.47656 4.50540 4.55549 4.57079 4.58424 4.60026 4.61435 4.73784 4.76372 4.78644 4.80912 4.84305 4.86316 4.87078 4.88641 4.99534 4.99741 5.08387 5.18893 5.27073 5.32916 5.35439 5.38387 5.43317 5.53810 6.27095 6.31031 6.36367 6.99238 7.25993 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.110 4.110 3 C -0.238 4.238 4 C -0.039 4.039 5 O -0.530 6.530 6 Si 0.740 3.260 7 S 0.274 5.726 8 C -0.288 4.288 9 C 0.592 3.408 10 O -0.572 6.572 11 N -0.700 5.700 12 C 0.120 3.880 13 H 0.100 0.900 14 C -0.163 4.163 15 C 0.086 3.914 16 F -0.197 7.197 17 C 0.134 3.866 18 N -0.704 5.704 19 C 0.647 3.353 20 O -0.588 6.588 21 O -0.372 6.372 22 C 0.126 3.874 23 C -0.180 4.180 24 C -0.139 4.139 25 C -0.179 4.179 26 C -0.139 4.139 27 C -0.061 4.061 28 H 0.074 0.926 29 H 0.061 0.939 30 H 0.081 0.919 31 H 0.141 0.859 32 H 0.387 0.613 33 H -0.273 1.273 34 H -0.278 1.278 35 H 0.416 0.584 36 H 0.079 0.921 37 H 0.126 0.874 38 H 0.109 0.891 39 H 0.084 0.916 40 H 0.414 0.586 41 H 0.059 0.941 42 H 0.087 0.913 43 H 0.066 0.934 44 H 0.068 0.932 45 H 0.099 0.901 46 H 0.067 0.933 47 H 0.067 0.933 48 H 0.087 0.913 49 H 0.061 0.939 50 H 0.143 0.857 51 H 0.100 0.900 52 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.377 5.100 -0.372 5.639 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.122 4.122 3 C -0.358 4.358 4 C -0.150 4.150 5 O -0.339 6.339 6 Si 0.641 3.359 7 S 0.544 5.456 8 C -0.408 4.408 9 C 0.379 3.621 10 O -0.452 6.452 11 N -0.351 5.351 12 C 0.015 3.985 13 H 0.118 0.882 14 C -0.202 4.202 15 C 0.067 3.933 16 F -0.177 7.177 17 C 0.011 3.989 18 N -0.364 5.364 19 C 0.400 3.600 20 O -0.479 6.479 21 O -0.286 6.286 22 C 0.090 3.910 23 C -0.237 4.237 24 C -0.196 4.196 25 C -0.236 4.236 26 C -0.177 4.177 27 C -0.095 4.095 28 H 0.093 0.907 29 H 0.080 0.920 30 H 0.100 0.900 31 H 0.159 0.841 32 H 0.237 0.763 33 H -0.199 1.199 34 H -0.203 1.203 35 H 0.254 0.746 36 H 0.097 0.903 37 H 0.145 0.855 38 H 0.127 0.873 39 H 0.103 0.897 40 H 0.250 0.750 41 H 0.078 0.922 42 H 0.106 0.894 43 H 0.085 0.915 44 H 0.087 0.913 45 H 0.118 0.882 46 H 0.086 0.914 47 H 0.086 0.914 48 H 0.105 0.895 49 H 0.080 0.920 50 H 0.161 0.839 51 H 0.119 0.881 52 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.727 6.429 -0.400 7.442 hybrid contribution -2.421 -1.864 -0.710 3.137 sum 1.306 4.565 -1.110 4.877 Atomic orbital electron populations 1.20603 0.88431 1.03120 1.02952 1.18732 0.98791 0.90605 1.04110 1.24687 0.99778 1.00852 1.10504 1.24679 0.91128 0.94662 1.04489 1.86621 1.28075 1.89227 1.29944 0.94718 0.83280 0.76641 0.81245 1.82271 1.01254 0.95130 1.66990 1.24624 0.97556 0.98828 1.19815 1.17214 0.82643 0.87013 0.75183 1.90845 1.82385 1.20214 1.51798 1.45617 1.04165 1.10727 1.74566 1.22460 0.86463 0.92422 0.97141 0.88186 1.24253 0.92717 1.05389 0.97796 1.21919 0.94346 0.78550 0.98506 1.92887 1.95201 1.36633 1.92975 1.21875 0.94168 0.93783 0.89028 1.44565 1.29972 1.24353 1.37554 1.18217 0.80703 0.82145 0.78911 1.90909 1.62613 1.23527 1.70826 1.86320 1.46828 1.48552 1.46920 1.22376 0.81772 0.95432 0.91387 1.22478 0.98216 1.02810 1.00231 1.21899 1.02713 0.98143 0.96841 1.22469 1.03279 0.96648 1.01217 1.23980 0.91360 1.03429 0.98979 1.20747 0.91530 1.00110 0.97078 0.90702 0.92047 0.90002 0.84116 0.76265 1.19894 1.20340 0.74624 0.90269 0.85539 0.87283 0.89737 0.74970 0.92160 0.89378 0.91521 0.91250 0.88216 0.91377 0.91413 0.89451 0.91965 0.83866 0.88107 0.84058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.09 8.67 71.24 0.62 0.71 16 2 C -0.11 -0.04 5.75 -21.05 -0.12 -0.17 16 3 C -0.24 0.69 5.54 24.68 0.14 0.82 16 4 C -0.04 0.19 2.76 71.24 0.20 0.38 16 5 O -0.53 1.28 9.85 -148.98 -1.47 -0.18 16 6 Si 0.74 -4.20 31.30 68.60 2.15 -2.05 16 7 S 0.27 -1.63 19.78 -56.49 -1.12 -2.74 16 8 C -0.29 -0.43 6.45 24.08 0.16 -0.28 16 9 C 0.59 2.56 7.78 86.42 0.67 3.23 16 10 O -0.57 -7.72 16.46 -4.38 -0.07 -7.80 16 11 N -0.70 2.55 5.36 -444.08 -2.38 0.17 16 12 C 0.12 -0.41 4.19 45.52 0.19 -0.22 16 13 H 0.10 0.25 7.50 -2.39 -0.02 0.24 16 14 C -0.16 0.86 7.34 31.18 0.23 1.09 16 15 C 0.09 -0.46 1.67 -10.21 -0.02 -0.47 16 16 F -0.20 -0.20 16.79 44.97 0.76 0.56 16 17 C 0.13 -0.61 5.37 86.38 0.46 -0.14 16 18 N -0.70 0.04 5.47 -590.85 -3.23 -3.19 16 19 C 0.65 3.58 8.06 129.79 1.05 4.63 16 20 O -0.59 -5.58 11.88 19.81 0.24 -5.34 16 21 O -0.37 -1.99 9.94 -55.47 -0.55 -2.54 16 22 C 0.13 0.31 1.13 -10.80 -0.01 0.30 16 23 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 24 C -0.14 0.28 8.85 71.98 0.64 0.92 16 25 C -0.18 -0.35 8.37 71.98 0.60 0.26 16 26 C -0.14 1.25 7.28 31.12 0.23 1.48 16 27 C -0.06 -0.20 9.80 21.72 0.21 0.01 16 28 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 29 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 30 H 0.08 -0.02 6.41 -2.39 -0.02 -0.04 16 31 H 0.14 -0.98 7.96 -2.39 -0.02 -1.00 16 32 H 0.39 -2.69 8.66 -74.06 -0.64 -3.33 16 33 H -0.27 0.30 7.11 99.48 0.71 1.00 16 34 H -0.28 -0.34 7.11 99.48 0.71 0.37 16 35 H 0.42 -4.25 7.82 -92.71 -0.73 -4.98 16 36 H 0.08 -0.17 8.14 -2.38 -0.02 -0.18 16 37 H 0.13 -1.14 7.98 -2.39 -0.02 -1.16 16 38 H 0.11 -0.80 7.96 -2.39 -0.02 -0.82 16 39 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 40 H 0.41 -0.69 8.30 -92.71 -0.77 -1.46 16 41 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 42 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 43 H 0.07 0.48 5.88 -2.39 -0.01 0.47 16 44 H 0.07 -0.15 8.14 -2.38 -0.02 -0.17 16 45 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 46 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 47 H 0.07 0.43 5.88 -2.39 -0.01 0.42 16 48 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 49 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 50 H 0.14 -2.18 8.07 -2.39 -0.02 -2.20 16 51 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 52 H 0.14 0.70 8.06 -2.91 -0.02 0.68 16 Total: 0.00 -23.85 436.61 -0.96 -24.81 By element: Atomic # 1 Polarization: -13.28 SS G_CDS: -1.12 Total: -14.39 kcal Atomic # 6 Polarization: 6.85 SS G_CDS: 5.84 Total: 12.69 kcal Atomic # 7 Polarization: 2.59 SS G_CDS: -5.61 Total: -3.02 kcal Atomic # 8 Polarization: -14.00 SS G_CDS: -1.86 Total: -15.86 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.76 Total: 0.56 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.15 Total: -2.05 kcal Atomic # 16 Polarization: -1.63 SS G_CDS: -1.12 Total: -2.74 kcal Total: -23.85 -0.96 -24.81 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15734572_6739946.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.620 kcal (2) G-P(sol) polarization free energy of solvation -23.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.813 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds