Wall clock time and date at job start Thu Mar 4 2021 12:34:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34234 * 117.00312 * 2 1 4 4 O 1.20829 * 119.99453 * 0.02562 * 3 2 1 5 5 C 1.50696 * 119.99968 * 179.97438 * 3 2 1 6 6 C 1.53901 * 113.59249 * 180.02562 * 5 3 2 7 7 C 1.53135 * 86.89410 * 139.54001 * 6 5 3 8 8 C 1.53149 * 87.73318 * 334.92222 * 7 6 5 9 9 C 1.53746 * 114.90908 * 218.68033 * 7 6 5 10 10 C 1.55304 * 102.82914 * 208.23011 * 9 7 6 11 11 C 1.54968 * 101.66389 * 34.75492 * 10 9 7 12 12 N 1.46389 * 115.38131 * 92.02562 * 7 6 5 13 13 C 1.34777 * 125.79595 * 308.72333 * 12 7 6 14 14 O 1.21568 * 120.00298 * 353.25013 * 13 12 7 15 15 C 1.47714 * 119.99646 * 172.97814 * 13 12 7 16 16 N 1.31802 * 126.51587 * 359.95720 * 15 13 12 17 17 N 1.28477 * 110.07225 * 179.82131 * 16 15 13 18 18 C 1.46491 * 124.88725 * 180.16094 * 17 16 15 19 19 C 1.35035 * 110.22422 * 0.46078 * 17 16 15 20 20 C 1.50701 * 126.38204 * 179.72808 * 19 17 16 21 21 O 1.42901 * 109.47574 * 30.02008 * 20 19 17 22 22 Si 1.86302 * 109.47303 * 150.02121 * 20 19 17 23 23 C 1.35360 * 107.23510 * 359.72020 * 19 17 16 24 24 H 1.08993 * 109.46900 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.46885 * 299.99576 * 1 2 3 26 26 H 1.09000 * 109.46842 * 59.99346 * 1 2 3 27 27 H 1.09004 * 112.83654 * 48.86573 * 5 3 2 28 28 H 1.08996 * 113.64193 * 25.03783 * 6 5 3 29 29 H 1.09005 * 113.72450 * 254.05201 * 6 5 3 30 30 H 1.09000 * 113.64713 * 139.58057 * 8 7 6 31 31 H 1.09004 * 113.63862 * 270.58229 * 8 7 6 32 32 H 1.09001 * 110.91289 * 89.79989 * 9 7 6 33 33 H 1.08998 * 110.68688 * 326.55970 * 9 7 6 34 34 H 1.08993 * 110.99126 * 276.66176 * 10 9 7 35 35 H 1.09000 * 111.02243 * 152.85773 * 10 9 7 36 36 H 1.08994 * 110.35970 * 204.47854 * 11 10 9 37 37 H 1.09006 * 110.45277 * 82.21477 * 11 10 9 38 38 H 1.09009 * 109.47404 * 270.34076 * 18 17 16 39 39 H 1.09003 * 109.47306 * 30.33949 * 18 17 16 40 40 H 1.08999 * 109.47375 * 150.33869 * 18 17 16 41 41 H 1.09004 * 109.47119 * 270.01752 * 20 19 17 42 42 H 0.96700 * 113.99769 * 59.99749 * 21 20 19 43 43 H 1.48499 * 109.99917 * 58.67772 * 22 20 19 44 44 H 1.48499 * 110.00316 * 179.97438 * 22 20 19 45 45 H 1.08002 * 127.25159 * 179.97438 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.1078 2.7154 0.0011 7 6 5.1673 2.2282 0.9937 8 6 4.1909 1.1200 1.3986 9 6 5.5100 3.2227 2.1150 10 6 6.9809 2.8614 2.4586 11 6 7.5390 2.4645 1.0685 12 7 6.4229 1.7702 0.3966 13 6 6.5397 0.8716 -0.6011 14 8 5.5583 0.2755 -1.0003 15 6 7.8593 0.6154 -1.2135 16 7 9.0000 1.1894 -0.8873 17 7 9.9504 0.7293 -1.6193 18 6 11.3532 1.1412 -1.5276 19 6 9.4688 -0.1839 -2.4897 20 6 10.2649 -0.9451 -3.5183 21 8 11.6011 -1.1289 -3.0463 22 14 9.4751 -2.6072 -3.8095 23 6 8.1379 -0.2884 -2.2661 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8899 27 1 4.0237 0.6368 -0.7557 28 1 3.4146 3.4427 0.4236 29 1 4.5191 3.0297 -0.9582 30 1 4.6687 0.1536 1.5594 31 1 3.5208 1.4030 2.2104 32 1 4.8633 3.0724 2.9794 33 1 5.4384 4.2489 1.7547 34 1 7.0249 2.0212 3.1514 35 1 7.5118 3.7244 2.8605 36 1 8.3910 1.7938 1.1793 37 1 7.8268 3.3526 0.5058 38 1 11.5271 1.9887 -2.1907 39 1 11.5808 1.4299 -0.5015 40 1 11.9955 0.3114 -1.8225 41 1 10.2835 -0.3832 -4.4521 42 1 11.6608 -1.6223 -2.2168 43 1 8.0746 -2.4302 -4.2704 44 1 10.2504 -3.3675 -4.8224 45 1 7.4363 -0.9266 -2.7826 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15736542_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:34:37 Heat of formation + Delta-G solvation = -2.994666 kcal Electronic energy + Delta-G solvation = -30411.281742 eV Core-core repulsion = 26206.979487 eV Total energy + Delta-G solvation = -4204.302255 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.156 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.87527 -42.55467 -41.16107 -39.01724 -38.10180 -37.69072 -36.67074 -34.35669 -33.06013 -32.26597 -29.77848 -28.57706 -28.16045 -26.99185 -26.79830 -25.47174 -24.54397 -23.11426 -22.16924 -21.62938 -21.10031 -19.31086 -18.98574 -18.53219 -18.03383 -17.60356 -17.45589 -17.31197 -17.02014 -16.86228 -16.37889 -15.88771 -15.84021 -15.64238 -15.43353 -15.05623 -14.96074 -14.41821 -14.38069 -14.07393 -14.00174 -13.80116 -13.53222 -13.48723 -13.42429 -13.14790 -12.95291 -12.71326 -12.62981 -12.32878 -12.12431 -11.98622 -11.91928 -11.86840 -11.62050 -11.42250 -11.19184 -10.85090 -10.66308 -10.22353 -9.96550 -9.75268 -4.96970 0.39538 0.78924 1.07125 1.18263 1.51787 1.68256 1.76731 1.84496 2.00156 2.18958 3.03368 3.19596 3.31840 3.32558 3.37843 3.49111 3.63116 3.71769 3.94290 3.99758 4.18333 4.19111 4.24186 4.25157 4.32204 4.34856 4.40076 4.41245 4.50975 4.56257 4.60252 4.63458 4.67973 4.75262 4.77177 4.81527 4.91673 4.96169 5.00270 5.09623 5.16725 5.23140 5.30800 5.33296 5.49010 5.70098 6.31549 6.53381 6.65899 6.77287 7.12589 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.366 6.366 3 C 0.470 3.530 4 O -0.542 6.542 5 C -0.151 4.151 6 C -0.119 4.119 7 C 0.146 3.854 8 C -0.109 4.109 9 C -0.112 4.112 10 C -0.126 4.126 11 C 0.107 3.893 12 N -0.585 5.585 13 C 0.615 3.385 14 O -0.546 6.546 15 C -0.035 4.035 16 N -0.253 5.253 17 N -0.258 5.258 18 C 0.063 3.937 19 C -0.007 4.007 20 C -0.034 4.034 21 O -0.541 6.541 22 Si 0.790 3.210 23 C -0.195 4.195 24 H 0.128 0.872 25 H 0.064 0.936 26 H 0.058 0.942 27 H 0.174 0.826 28 H 0.105 0.895 29 H 0.065 0.935 30 H 0.079 0.921 31 H 0.105 0.895 32 H 0.100 0.900 33 H 0.090 0.910 34 H 0.081 0.919 35 H 0.107 0.893 36 H 0.090 0.910 37 H 0.073 0.927 38 H 0.086 0.914 39 H 0.107 0.893 40 H 0.137 0.863 41 H 0.126 0.874 42 H 0.400 0.600 43 H -0.292 1.292 44 H -0.282 1.282 45 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.447 -1.256 4.303 9.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.282 6.282 3 C 0.315 3.685 4 O -0.433 6.433 5 C -0.169 4.169 6 C -0.157 4.157 7 C 0.060 3.940 8 C -0.148 4.148 9 C -0.150 4.150 10 C -0.163 4.163 11 C -0.015 4.015 12 N -0.316 5.316 13 C 0.405 3.595 14 O -0.425 6.425 15 C -0.192 4.192 16 N -0.091 5.091 17 N -0.047 5.047 18 C -0.075 4.075 19 C -0.132 4.132 20 C -0.145 4.145 21 O -0.349 6.349 22 Si 0.694 3.306 23 C -0.223 4.223 24 H 0.147 0.853 25 H 0.083 0.917 26 H 0.077 0.923 27 H 0.190 0.810 28 H 0.123 0.877 29 H 0.083 0.917 30 H 0.097 0.903 31 H 0.123 0.877 32 H 0.118 0.882 33 H 0.108 0.892 34 H 0.100 0.900 35 H 0.125 0.875 36 H 0.108 0.892 37 H 0.091 0.909 38 H 0.105 0.895 39 H 0.126 0.874 40 H 0.155 0.845 41 H 0.143 0.857 42 H 0.251 0.749 43 H -0.219 1.219 44 H -0.208 1.208 45 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 8.118 -0.711 3.680 8.942 hybrid contribution -1.039 0.258 -1.139 1.563 sum 7.079 -0.452 2.541 7.535 Atomic orbital electron populations 1.23527 0.75214 1.05567 1.02412 1.86551 1.24728 1.33397 1.83530 1.24335 0.92715 0.80873 0.70565 1.90610 1.68004 1.37268 1.47392 1.24041 0.85521 1.02449 1.04840 1.23222 0.97383 0.94947 1.00150 1.21497 0.83659 0.94982 0.93863 1.23108 0.97233 1.00086 0.94331 1.22549 0.97880 0.98149 0.96406 1.22865 0.94954 1.03270 0.95254 1.22615 0.88795 0.97147 0.92942 1.48041 1.08560 1.40655 1.34312 1.16820 0.86086 0.78398 0.78174 1.90249 1.36957 1.50929 1.64412 1.21562 0.92413 1.03015 1.02246 1.73600 0.95976 1.21091 1.18425 1.45804 1.09340 1.26566 1.23039 1.22951 0.73519 1.04953 1.06089 1.22057 0.94253 0.98039 0.98886 1.24789 0.86196 1.08069 0.95432 1.86452 1.23487 1.78570 1.46402 0.93195 0.75367 0.75767 0.86320 1.21596 0.95187 1.04534 1.00963 0.85336 0.91744 0.92318 0.81001 0.87698 0.91666 0.90253 0.87665 0.88192 0.89173 0.89993 0.87477 0.89175 0.90895 0.89501 0.87426 0.84483 0.85678 0.74855 1.21868 1.20848 0.82182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.11 10.56 113.37 1.20 1.31 16 2 O -0.37 -3.96 10.57 -51.45 -0.54 -4.50 16 3 C 0.47 5.89 7.48 71.23 0.53 6.42 16 4 O -0.54 -9.04 15.64 21.96 0.34 -8.69 16 5 C -0.15 -1.41 3.61 -10.94 -0.04 -1.45 16 6 C -0.12 -0.78 6.62 30.94 0.20 -0.58 16 7 C 0.15 0.36 1.44 3.97 0.01 0.36 16 8 C -0.11 -0.46 6.59 30.95 0.20 -0.26 16 9 C -0.11 0.41 6.30 31.64 0.20 0.61 16 10 C -0.13 0.73 7.09 32.06 0.23 0.96 16 11 C 0.11 -0.17 5.95 86.84 0.52 0.35 16 12 N -0.58 -2.19 3.17 -770.09 -2.44 -4.63 16 13 C 0.62 5.20 7.57 86.75 0.66 5.86 16 14 O -0.55 -7.09 12.50 -3.93 -0.05 -7.14 16 15 C -0.03 -0.22 6.96 42.46 0.30 0.08 16 16 N -0.25 -0.68 9.32 -48.17 -0.45 -1.13 16 17 N -0.26 0.38 3.70 -355.94 -1.32 -0.94 16 18 C 0.06 -0.56 11.00 127.77 1.41 0.85 16 19 C -0.01 0.01 6.18 41.40 0.26 0.26 16 20 C -0.03 0.17 2.99 71.24 0.21 0.39 16 21 O -0.54 4.59 10.02 -148.98 -1.49 3.10 16 22 Si 0.79 -3.41 31.37 68.60 2.15 -1.26 16 23 C -0.19 -0.81 9.35 22.41 0.21 -0.60 16 24 H 0.13 -0.21 8.14 -2.39 -0.02 -0.23 16 25 H 0.06 0.25 8.13 -2.39 -0.02 0.23 16 26 H 0.06 0.30 8.13 -2.39 -0.02 0.28 16 27 H 0.17 2.28 4.13 -77.40 -0.32 1.96 16 28 H 0.10 0.69 7.41 -2.39 -0.02 0.67 16 29 H 0.06 0.57 8.14 -2.38 -0.02 0.55 16 30 H 0.08 0.43 8.14 -2.39 -0.02 0.41 16 31 H 0.11 0.17 7.88 -2.39 -0.02 0.15 16 32 H 0.10 -0.57 7.79 -2.39 -0.02 -0.59 16 33 H 0.09 -0.41 8.11 -2.39 -0.02 -0.43 16 34 H 0.08 -0.49 8.14 -2.39 -0.02 -0.51 16 35 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 36 H 0.09 -0.11 6.66 -2.39 -0.02 -0.13 16 37 H 0.07 -0.11 8.14 -2.38 -0.02 -0.13 16 38 H 0.09 -0.77 8.14 -2.38 -0.02 -0.79 16 39 H 0.11 -1.21 8.14 -2.39 -0.02 -1.22 16 40 H 0.14 -1.68 5.01 -2.39 -0.01 -1.69 16 41 H 0.13 -0.60 7.96 -2.38 -0.02 -0.62 16 42 H 0.40 -6.41 8.39 -74.06 -0.62 -7.03 16 43 H -0.29 -0.83 6.83 99.48 0.68 -0.15 16 44 H -0.28 -0.38 7.11 99.48 0.71 0.32 16 45 H 0.16 0.73 6.84 -2.91 -0.02 0.71 16 Total: 0.00 -22.28 361.49 2.40 -19.88 By element: Atomic # 1 Polarization: -9.36 SS G_CDS: 0.11 Total: -9.25 kcal Atomic # 6 Polarization: 8.48 SS G_CDS: 6.08 Total: 14.56 kcal Atomic # 7 Polarization: -2.49 SS G_CDS: -4.20 Total: -6.70 kcal Atomic # 8 Polarization: -15.49 SS G_CDS: -1.74 Total: -17.24 kcal Atomic # 14 Polarization: -3.41 SS G_CDS: 2.15 Total: -1.26 kcal Total: -22.28 2.40 -19.88 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15736542_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.884 kcal (2) G-P(sol) polarization free energy of solvation -22.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.395 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.879 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds