Wall clock time and date at job start Thu Mar 4 2021 12:58:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86304 * 109.46973 * 2 1 4 4 H 1.48497 * 109.47054 * 60.00170 * 3 2 1 5 5 H 1.48496 * 109.46846 * 180.02562 * 3 2 1 6 6 H 1.48500 * 109.47033 * 300.00038 * 3 2 1 7 7 C 1.50705 * 109.46876 * 240.00275 * 2 1 3 8 8 C 1.37857 * 119.88923 * 300.27802 * 7 2 1 9 9 C 1.39662 * 119.87521 * 180.27647 * 8 7 2 10 10 C 1.47691 * 120.16767 * 179.71640 * 9 8 7 11 11 O 1.21566 * 120.00345 * 179.72923 * 10 9 8 12 12 N 1.34782 * 119.99576 * 359.72652 * 10 9 8 13 13 C 1.46506 * 119.99569 * 179.97438 * 12 10 9 14 14 C 1.52588 * 108.90847 * 204.99993 * 13 12 10 15 15 C 1.54362 * 109.20169 * 161.59307 * 14 13 12 16 16 Si 1.85204 * 107.14387 * 56.67478 * 15 14 13 17 17 C 1.87761 * 111.39232 * 193.23530 * 16 15 14 18 18 C 1.56407 * 98.97303 * 221.43794 * 17 16 15 19 19 C 1.53779 * 109.77706 * 39.35984 * 18 17 16 20 20 C 1.55690 * 111.40408 * 312.19566 * 19 18 17 21 21 C 1.85277 * 109.97989 * 317.33870 * 16 15 14 22 22 C 1.52591 * 108.83320 * 82.24148 * 13 12 10 23 23 C 1.39828 * 119.66894 * 359.44844 * 9 8 7 24 24 F 1.35093 * 120.11211 * 180.29482 * 23 9 8 25 25 C 1.38322 * 119.77471 * 0.27014 * 23 9 8 26 26 C 1.38204 * 120.12048 * 0.02562 * 25 23 9 27 27 H 0.96695 * 113.99608 * 299.99652 * 1 2 3 28 28 H 1.08995 * 109.47076 * 120.00336 * 2 1 3 29 29 H 1.07999 * 120.06483 * 0.02562 * 8 7 2 30 30 H 0.96998 * 120.00003 * 359.97438 * 12 10 9 31 31 H 1.08998 * 108.89064 * 323.64291 * 13 12 10 32 32 H 1.09003 * 109.51691 * 41.68235 * 14 13 12 33 33 H 1.08994 * 109.52084 * 281.51466 * 14 13 12 34 34 H 1.09002 * 109.93522 * 176.10916 * 15 14 13 35 35 H 1.09000 * 109.93236 * 297.24332 * 15 14 13 36 36 H 1.09004 * 111.48939 * 338.87885 * 17 16 15 37 37 H 1.08995 * 111.49490 * 103.99331 * 17 16 15 38 38 H 1.08995 * 109.41788 * 279.26608 * 18 17 16 39 39 H 1.08998 * 109.42029 * 159.45540 * 18 17 16 40 40 H 1.08998 * 109.10136 * 191.67900 * 19 18 17 41 41 H 1.09007 * 109.09995 * 72.71222 * 19 18 17 42 42 H 1.08997 * 111.14134 * 270.09921 * 20 19 18 43 43 H 1.08999 * 111.17949 * 145.89816 * 20 19 18 44 44 H 1.08996 * 109.86118 * 283.27731 * 21 16 15 45 45 H 1.09008 * 110.01933 * 162.13210 * 21 16 15 46 46 H 1.08997 * 109.51931 * 318.37097 * 22 13 12 47 47 H 1.09005 * 109.51661 * 78.47808 * 22 13 12 48 48 H 1.08002 * 119.93657 * 180.02562 * 25 23 9 49 49 H 1.07997 * 119.83202 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 1 1.5551 2.4565 1.2125 5 1 3.5350 1.7565 -0.0006 6 1 1.5550 2.4565 -1.2125 7 6 1.9314 -0.7104 -1.2306 8 6 1.5922 -2.0285 -1.4494 9 6 2.0626 -2.6883 -2.5869 10 6 1.7083 -4.1022 -2.8246 11 8 2.1153 -4.6722 -3.8182 12 7 0.9337 -4.7607 -1.9397 13 6 0.5818 -6.1632 -2.1757 14 6 -0.7218 -6.4753 -1.4468 15 6 -1.3405 -7.7590 -2.0402 16 14 -0.0702 -9.0981 -1.8878 17 6 -0.5292 -10.5982 -2.9196 18 6 -0.1332 -11.7217 -1.9062 19 6 -0.5275 -11.2996 -0.4810 20 6 -0.0622 -9.8469 -0.1695 21 6 1.5997 -8.4422 -2.3504 22 6 1.7344 -7.0460 -1.7059 23 6 2.8660 -2.0018 -3.5026 24 9 3.3210 -2.6295 -4.6089 25 6 3.1929 -0.6777 -3.2720 26 6 2.7275 -0.0354 -2.1403 27 1 -0.3932 0.4416 0.7651 28 1 1.7924 -0.5139 0.8899 29 1 0.9672 -2.5513 -0.7405 30 1 0.6093 -4.3061 -1.1467 31 1 0.4338 -6.3148 -3.2449 32 1 -1.4168 -5.6449 -1.5718 33 1 -0.5193 -6.6252 -0.3864 34 1 -2.2366 -8.0317 -1.4828 35 1 -1.5896 -7.6008 -3.0895 36 1 -1.5961 -10.6186 -3.1418 37 1 0.0667 -10.6538 -3.8306 38 1 0.9433 -11.8868 -1.9506 39 1 -0.6514 -12.6444 -2.1674 40 1 -0.0677 -11.9825 0.2333 41 1 -1.6113 -11.3567 -0.3791 42 1 0.9403 -9.8385 0.2584 43 1 -0.7705 -9.3382 0.4844 44 1 1.6781 -8.3601 -3.4344 45 1 2.3787 -9.1034 -1.9706 46 1 2.6818 -6.5972 -2.0040 47 1 1.7017 -7.1404 -0.6204 48 1 3.8129 -0.1449 -3.9778 49 1 2.9853 0.9986 -1.9651 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_12335834.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 12:58:24 Heat of formation + Delta-G solvation = -131.999488 kcal Electronic energy + Delta-G solvation = -29001.009253 eV Core-core repulsion = 24965.206057 eV Total energy + Delta-G solvation = -4035.803196 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 351.158 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.04598 -41.44809 -40.04887 -37.94020 -37.40158 -36.13566 -34.35869 -32.57974 -32.21436 -32.07726 -29.67575 -27.22796 -26.57456 -25.26250 -24.61807 -23.61897 -22.97740 -21.65722 -21.40007 -20.88551 -19.16682 -18.60023 -18.17295 -17.87258 -17.00462 -16.92543 -16.44405 -16.16012 -16.00817 -15.94536 -15.77341 -15.68368 -15.49479 -14.97255 -14.75569 -14.68183 -14.27498 -14.17669 -13.88232 -13.68342 -13.39685 -13.33745 -13.22506 -13.13455 -12.86278 -12.72035 -12.45075 -12.36403 -12.18226 -12.11445 -11.97214 -11.94928 -11.78711 -11.73505 -11.33574 -11.14956 -10.49140 -10.36562 -10.31587 -10.29001 -10.18146 -10.05500 -9.77747 -0.53023 -0.04908 1.18865 1.49774 1.55105 1.61094 1.78266 1.90211 1.94849 1.96756 2.01107 2.45139 2.67521 3.01791 3.31043 3.39497 3.55388 3.74227 3.76684 3.99499 4.05429 4.12679 4.14691 4.16529 4.19546 4.31776 4.36153 4.42516 4.49674 4.58155 4.61639 4.68900 4.69760 4.74876 4.77931 4.82387 4.85344 4.89625 5.10404 5.12781 5.13484 5.15208 5.22168 5.23790 5.26373 5.33623 5.38089 5.45414 5.49200 5.54522 5.56025 5.60800 6.39593 6.86382 7.07839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.075 4.075 3 Si 0.966 3.034 4 H -0.254 1.254 5 H -0.254 1.254 6 H -0.270 1.270 7 C -0.097 4.097 8 C -0.021 4.021 9 C -0.188 4.188 10 C 0.553 3.447 11 O -0.571 6.571 12 N -0.706 5.706 13 C 0.133 3.867 14 C -0.113 4.113 15 C -0.410 4.410 16 Si 1.052 2.948 17 C -0.425 4.425 18 C -0.128 4.128 19 C -0.123 4.123 20 C -0.407 4.407 21 C -0.424 4.424 22 C -0.116 4.116 23 C 0.130 3.870 24 F -0.136 7.136 25 C -0.153 4.153 26 C -0.069 4.069 27 H 0.402 0.598 28 H 0.111 0.889 29 H 0.167 0.833 30 H 0.415 0.585 31 H 0.066 0.934 32 H 0.080 0.920 33 H 0.097 0.903 34 H 0.099 0.901 35 H 0.075 0.925 36 H 0.080 0.920 37 H 0.071 0.929 38 H 0.061 0.939 39 H 0.059 0.941 40 H 0.059 0.941 41 H 0.065 0.935 42 H 0.078 0.922 43 H 0.091 0.909 44 H 0.062 0.938 45 H 0.080 0.920 46 H 0.039 0.961 47 H 0.090 0.910 48 H 0.164 0.836 49 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.034 3.481 8.973 10.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.185 4.185 3 Si 0.791 3.209 4 H -0.179 1.179 5 H -0.178 1.178 6 H -0.195 1.195 7 C -0.097 4.097 8 C -0.039 4.039 9 C -0.192 4.192 10 C 0.341 3.659 11 O -0.451 6.451 12 N -0.358 5.358 13 C 0.029 3.971 14 C -0.151 4.151 15 C -0.497 4.497 16 Si 1.242 2.758 17 C -0.510 4.510 18 C -0.165 4.165 19 C -0.160 4.160 20 C -0.494 4.494 21 C -0.508 4.508 22 C -0.154 4.154 23 C 0.110 3.890 24 F -0.115 7.115 25 C -0.172 4.172 26 C -0.087 4.087 27 H 0.253 0.747 28 H 0.129 0.871 29 H 0.184 0.816 30 H 0.254 0.746 31 H 0.084 0.916 32 H 0.098 0.902 33 H 0.116 0.884 34 H 0.118 0.882 35 H 0.094 0.906 36 H 0.099 0.901 37 H 0.090 0.910 38 H 0.080 0.920 39 H 0.078 0.922 40 H 0.078 0.922 41 H 0.084 0.916 42 H 0.097 0.903 43 H 0.110 0.890 44 H 0.081 0.919 45 H 0.099 0.901 46 H 0.058 0.942 47 H 0.109 0.891 48 H 0.182 0.818 49 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -2.329 3.605 7.673 8.792 hybrid contribution 0.156 -0.317 -0.114 0.371 sum -2.173 3.288 7.560 8.525 Atomic orbital electron populations 1.86447 1.16857 1.82221 1.51414 1.24648 0.86076 1.10238 0.97560 0.85445 0.79943 0.75078 0.80452 1.17852 1.17835 1.19453 1.19592 0.98810 0.94209 0.97108 1.21237 0.94894 0.93850 0.93947 1.20133 1.05233 0.94784 0.99009 1.18296 0.78628 0.86125 0.82895 1.90834 1.54745 1.69656 1.29841 1.45939 1.51249 1.13033 1.25559 1.21231 0.95301 0.79419 1.01182 1.21611 0.93669 0.98970 1.00855 1.26184 1.11219 1.08051 1.04284 0.78859 0.64865 0.65092 0.66938 1.26857 1.04749 1.14857 1.04561 1.22085 1.01205 0.98993 0.94267 1.21877 1.01477 0.96866 0.95807 1.26553 1.04300 1.01715 1.16788 1.26454 1.19697 1.00852 1.03790 1.21678 0.97301 0.94803 1.01615 1.18164 0.95574 0.91745 0.83518 1.91552 1.86651 1.82722 1.50532 1.21302 1.03406 0.92067 1.00420 1.21334 0.94962 1.00433 0.91938 0.74683 0.87130 0.81552 0.74607 0.91621 0.90185 0.88439 0.88204 0.90595 0.90093 0.90994 0.91983 0.92210 0.92208 0.91621 0.90319 0.89023 0.91893 0.90124 0.94222 0.89125 0.81805 0.83049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.89 12.74 -148.98 -1.90 1.99 16 2 C -0.07 0.57 2.81 71.24 0.20 0.77 16 3 Si 0.97 -6.12 25.06 68.60 1.72 -4.40 16 4 H -0.25 1.51 7.11 99.48 0.71 2.21 16 5 H -0.25 1.32 7.11 99.48 0.71 2.02 16 6 H -0.27 0.60 7.11 99.48 0.71 1.31 16 7 C -0.10 0.24 5.42 -19.90 -0.11 0.13 16 8 C -0.02 0.03 9.09 22.52 0.20 0.23 16 9 C -0.19 -1.07 5.88 -20.05 -0.12 -1.19 16 10 C 0.55 5.09 7.48 86.74 0.65 5.74 16 11 O -0.57 -10.71 14.95 -3.92 -0.06 -10.77 16 12 N -0.71 -0.74 4.99 -446.84 -2.23 -2.97 16 13 C 0.13 0.14 1.96 44.72 0.09 0.23 16 14 C -0.11 0.58 5.11 30.92 0.16 0.74 16 15 C -0.41 1.96 4.95 72.44 0.36 2.31 16 16 Si 1.05 -4.35 10.59 68.60 0.73 -3.62 16 17 C -0.43 0.21 5.95 73.17 0.43 0.64 16 18 C -0.13 -0.03 5.97 32.04 0.19 0.16 16 19 C -0.12 0.16 6.09 31.79 0.19 0.36 16 20 C -0.41 1.61 5.84 72.91 0.43 2.04 16 21 C -0.42 -0.39 4.96 72.44 0.36 -0.04 16 22 C -0.12 -0.18 5.24 30.92 0.16 -0.02 16 23 C 0.13 1.07 7.29 22.67 0.17 1.23 16 24 F -0.14 -2.02 15.55 44.97 0.70 -1.32 16 25 C -0.15 -0.27 10.01 22.28 0.22 -0.05 16 26 C -0.07 0.10 8.66 22.31 0.19 0.30 16 27 H 0.40 -6.20 8.74 -74.06 -0.65 -6.85 16 28 H 0.11 -1.43 7.96 -2.39 -0.02 -1.45 16 29 H 0.17 -1.30 6.41 -2.91 -0.02 -1.32 16 30 H 0.42 -2.58 6.61 -92.71 -0.61 -3.20 16 31 H 0.07 0.44 7.29 -2.39 -0.02 0.42 16 32 H 0.08 -0.45 8.13 -2.39 -0.02 -0.47 16 33 H 0.10 -0.93 7.76 -2.39 -0.02 -0.95 16 34 H 0.10 -0.71 7.97 -2.39 -0.02 -0.73 16 35 H 0.08 -0.23 7.97 -2.39 -0.02 -0.25 16 36 H 0.08 -0.08 8.04 -2.38 -0.02 -0.10 16 37 H 0.07 0.05 8.04 -2.39 -0.02 0.03 16 38 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 40 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 41 H 0.06 -0.14 8.14 -2.38 -0.02 -0.16 16 42 H 0.08 -0.30 8.03 -2.39 -0.02 -0.32 16 43 H 0.09 -0.56 8.03 -2.39 -0.02 -0.58 16 44 H 0.06 0.27 7.97 -2.39 -0.02 0.26 16 45 H 0.08 0.04 7.98 -2.38 -0.02 0.02 16 46 H 0.04 0.31 7.82 -2.39 -0.02 0.29 16 47 H 0.09 -0.31 7.77 -2.38 -0.02 -0.33 16 48 H 0.16 -0.38 8.06 -2.91 -0.02 -0.40 16 49 H 0.15 -0.82 4.86 -2.91 -0.01 -0.83 16 Total: 0.00 -22.10 385.89 3.20 -18.90 By element: Atomic # 1 Polarization: -11.87 SS G_CDS: 0.46 Total: -11.41 kcal Atomic # 6 Polarization: 9.82 SS G_CDS: 3.78 Total: 13.60 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -2.23 Total: -2.97 kcal Atomic # 8 Polarization: -6.82 SS G_CDS: -1.96 Total: -8.78 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 0.70 Total: -1.32 kcal Atomic # 14 Polarization: -10.47 SS G_CDS: 2.45 Total: -8.02 kcal Total: -22.10 3.20 -18.90 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_12335834.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.102 kcal (2) G-P(sol) polarization free energy of solvation -22.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.203 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.203 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds