Wall clock time and date at job start Thu Mar 4 2021 13:39:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50692 * 1 3 3 C 1.36419 * 125.80438 * 2 1 4 4 C 1.47376 * 127.18910 * 0.02562 * 3 2 1 5 5 O 1.21612 * 120.00234 * 359.71462 * 4 3 2 6 6 N 1.34782 * 119.99551 * 179.70627 * 4 3 2 7 7 C 1.46506 * 119.99569 * 180.02562 * 6 4 3 8 8 C 1.52588 * 108.90847 * 204.99993 * 7 6 4 9 9 C 1.54362 * 109.20169 * 161.59307 * 8 7 6 10 10 Si 1.85204 * 107.14387 * 56.67478 * 9 8 7 11 11 C 1.87761 * 111.39232 * 193.23530 * 10 9 8 12 12 C 1.56407 * 98.97303 * 221.43794 * 11 10 9 13 13 C 1.53779 * 109.77706 * 39.35984 * 12 11 10 14 14 C 1.55690 * 111.40408 * 312.19566 * 13 12 11 15 15 C 1.85277 * 109.97989 * 317.33870 * 10 9 8 16 16 C 1.52591 * 108.83320 * 82.24148 * 7 6 4 17 17 C 1.47022 * 105.61760 * 179.75468 * 3 2 1 18 18 C 1.34184 * 105.95165 * 0.22485 * 17 3 2 19 19 C 1.50698 * 125.43555 * 180.02562 * 18 17 3 20 20 O 1.42907 * 109.47191 * 299.99890 * 19 18 17 21 21 Si 1.86305 * 109.46940 * 180.02562 * 19 18 17 22 22 H 1.48496 * 109.47178 * 59.99871 * 21 19 18 23 23 H 1.48500 * 109.46956 * 179.97438 * 21 19 18 24 24 H 1.48492 * 109.46940 * 299.99579 * 21 19 18 25 25 O 1.33653 * 125.80234 * 180.14348 * 2 1 3 26 26 H 1.09004 * 109.47568 * 89.99885 * 1 2 3 27 27 H 1.09002 * 109.47644 * 209.99723 * 1 2 3 28 28 H 1.08999 * 109.47035 * 330.00397 * 1 2 3 29 29 H 0.96998 * 120.00003 * 0.02562 * 6 4 3 30 30 H 1.08998 * 108.89064 * 323.64291 * 7 6 4 31 31 H 1.09003 * 109.51691 * 41.68235 * 8 7 6 32 32 H 1.08994 * 109.52084 * 281.51466 * 8 7 6 33 33 H 1.09002 * 109.93522 * 176.10916 * 9 8 7 34 34 H 1.09000 * 109.93236 * 297.24332 * 9 8 7 35 35 H 1.09004 * 111.48939 * 338.87885 * 11 10 9 36 36 H 1.08995 * 111.49490 * 103.99331 * 11 10 9 37 37 H 1.08995 * 109.41788 * 279.26608 * 12 11 10 38 38 H 1.08998 * 109.42029 * 159.45540 * 12 11 10 39 39 H 1.08998 * 109.10136 * 191.67900 * 13 12 11 40 40 H 1.09007 * 109.09995 * 72.71222 * 13 12 11 41 41 H 1.08997 * 111.14134 * 270.09921 * 14 13 12 42 42 H 1.08999 * 111.17949 * 145.89816 * 14 13 12 43 43 H 1.08996 * 109.86118 * 283.27731 * 15 10 9 44 44 H 1.09008 * 110.01933 * 162.13210 * 15 10 9 45 45 H 1.08997 * 109.51931 * 318.37097 * 16 7 6 46 46 H 1.09005 * 109.51661 * 78.47808 * 16 7 6 47 47 H 1.08000 * 127.02719 * 180.20418 * 17 3 2 48 48 H 1.08999 * 109.47279 * 59.99649 * 19 18 17 49 49 H 0.96699 * 113.99453 * 300.00273 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5157 0.0005 5 8 0.6890 2.7892 -0.0042 6 7 2.7931 3.5015 0.0064 7 6 2.3646 4.9025 0.0075 8 6 3.4736 5.7592 -0.5961 9 6 2.8864 7.1203 -1.0265 10 14 2.1026 7.8752 0.4722 11 6 1.0110 9.3324 0.0136 12 6 1.4055 10.3067 1.1718 13 6 2.9151 10.2046 1.4462 14 6 3.3727 8.7209 1.5609 15 6 1.1559 6.5868 1.4084 16 6 2.0281 5.3135 1.4380 17 6 3.6849 0.5990 0.0061 18 6 3.5858 -0.7391 0.0040 19 6 4.7458 -1.7011 0.0090 20 8 5.5486 -1.4854 -1.1534 21 14 4.1025 -3.4496 0.0028 22 1 3.2813 -3.6706 -1.2145 23 1 5.2455 -4.3976 0.0072 24 1 3.2680 -3.6742 1.2104 25 8 2.2888 -1.0840 -0.0027 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 3.7382 3.2833 0.0100 30 1 1.4698 4.9983 -0.6074 31 1 3.8930 5.2525 -1.4653 32 1 4.2557 5.9184 0.1461 33 1 3.6814 7.7679 -1.3962 34 1 2.1364 6.9725 -1.8035 35 1 1.2789 9.7410 -0.9608 36 1 -0.0458 9.0687 0.0560 37 1 0.8543 10.0397 2.0735 38 1 1.1574 11.3288 0.8859 39 1 3.1441 10.7216 2.3780 40 1 3.4588 10.6837 0.6319 41 1 3.3062 8.3674 2.5898 42 1 4.3799 8.5877 1.1662 43 1 0.2130 6.3796 0.9026 44 1 0.9644 6.9298 2.4252 45 1 1.4810 4.5087 1.9290 46 1 2.9490 5.5146 1.9853 47 1 4.5928 1.1839 0.0108 48 1 5.3488 -1.5386 0.9023 49 1 5.0757 -1.6129 -1.9871 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15739290_13308374.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:39:53 Heat of formation + Delta-G solvation = -113.116294 kcal Electronic energy + Delta-G solvation = -27325.123316 eV Core-core repulsion = 23569.136881 eV Total energy + Delta-G solvation = -3755.986435 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 337.167 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -43.72640 -40.65830 -38.13278 -37.78325 -36.19847 -34.38344 -33.58792 -32.96670 -32.14580 -29.76276 -29.46868 -27.25251 -25.63709 -24.80830 -23.93706 -23.64698 -22.22886 -21.50813 -21.01858 -20.43879 -18.93121 -17.98320 -17.68999 -17.20946 -16.73492 -16.20816 -16.04216 -16.00211 -15.91219 -15.68782 -15.48305 -14.99953 -14.89203 -14.52635 -14.26133 -14.23255 -13.99354 -13.87062 -13.65504 -13.43027 -13.26332 -13.18271 -12.93256 -12.84724 -12.82296 -12.42159 -12.24351 -12.23429 -12.18216 -12.09648 -12.00854 -11.78697 -11.40085 -10.94813 -10.84575 -10.64020 -10.41873 -10.36954 -10.24095 -9.98298 -9.53008 0.33060 0.84330 0.99611 1.34035 1.41429 1.67560 1.70250 1.78199 1.84007 1.86599 2.23603 2.42092 2.59226 3.14210 3.38689 3.66710 3.79303 3.81840 4.03954 4.07234 4.10846 4.14917 4.15371 4.27901 4.28375 4.37023 4.42168 4.43390 4.55555 4.58760 4.60260 4.64444 4.65654 4.73198 4.80911 4.85977 5.02973 5.05665 5.08470 5.12930 5.15560 5.16887 5.23675 5.27166 5.29586 5.33331 5.40293 5.47861 5.49118 5.59382 5.92794 6.30248 6.57304 7.31029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.093 3.907 3 C -0.252 4.252 4 C 0.592 3.408 5 O -0.538 6.538 6 N -0.722 5.722 7 C 0.136 3.864 8 C -0.117 4.117 9 C -0.406 4.406 10 Si 0.990 3.010 11 C -0.407 4.407 12 C -0.122 4.122 13 C -0.118 4.118 14 C -0.405 4.405 15 C -0.405 4.405 16 C -0.116 4.116 17 C -0.146 4.146 18 C -0.059 4.059 19 C -0.040 4.040 20 O -0.529 6.529 21 Si 0.956 3.044 22 H -0.249 1.249 23 H -0.245 1.245 24 H -0.246 1.246 25 O -0.173 6.173 26 H 0.092 0.908 27 H 0.080 0.920 28 H 0.111 0.889 29 H 0.400 0.600 30 H 0.091 0.909 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.083 0.917 34 H 0.081 0.919 35 H 0.078 0.922 36 H 0.078 0.922 37 H 0.063 0.937 38 H 0.064 0.936 39 H 0.062 0.938 40 H 0.061 0.939 41 H 0.076 0.924 42 H 0.077 0.923 43 H 0.080 0.920 44 H 0.080 0.920 45 H 0.070 0.930 46 H 0.066 0.934 47 H 0.160 0.840 48 H 0.137 0.863 49 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.190 -0.201 -0.200 2.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.040 3.960 3 C -0.257 4.257 4 C 0.381 3.619 5 O -0.417 6.417 6 N -0.372 5.372 7 C 0.032 3.968 8 C -0.155 4.155 9 C -0.492 4.492 10 Si 1.184 2.816 11 C -0.493 4.493 12 C -0.159 4.159 13 C -0.156 4.156 14 C -0.492 4.492 15 C -0.492 4.492 16 C -0.155 4.155 17 C -0.165 4.165 18 C -0.107 4.107 19 C -0.150 4.150 20 O -0.334 6.334 21 Si 0.776 3.224 22 H -0.172 1.172 23 H -0.168 1.168 24 H -0.170 1.170 25 O -0.071 6.071 26 H 0.110 0.890 27 H 0.099 0.901 28 H 0.130 0.870 29 H 0.234 0.766 30 H 0.109 0.891 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.102 0.898 34 H 0.100 0.900 35 H 0.097 0.903 36 H 0.097 0.903 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.080 0.920 40 H 0.080 0.920 41 H 0.095 0.905 42 H 0.096 0.904 43 H 0.099 0.901 44 H 0.099 0.901 45 H 0.088 0.912 46 H 0.084 0.916 47 H 0.177 0.823 48 H 0.154 0.846 49 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 1.407 -1.067 0.224 1.780 hybrid contribution 0.389 0.604 -0.299 0.778 sum 1.796 -0.464 -0.075 1.856 Atomic orbital electron populations 1.20698 0.83386 1.05423 1.04752 1.22904 0.94052 0.82839 0.96189 1.21165 0.93240 0.93889 1.17390 1.17158 0.85493 0.83662 0.75621 1.90774 1.16491 1.83978 1.50455 1.45937 1.09693 1.05904 1.75686 1.21128 0.98837 0.79531 0.97343 1.21587 0.97294 0.95501 1.01103 1.26141 1.07199 1.01560 1.14348 0.79789 0.67724 0.66695 0.67364 1.26649 1.08541 1.13321 1.00793 1.22024 0.95632 1.00194 0.98087 1.21840 0.95514 0.96406 1.01830 1.26503 1.10065 1.03124 1.09463 1.26168 1.06313 1.07746 1.08997 1.21682 0.99903 0.98080 0.95825 1.22578 0.96468 0.93409 1.04048 1.22657 0.82832 0.95823 1.09429 1.24361 0.90353 1.07434 0.92856 1.86570 1.38159 1.93339 1.15378 0.85529 0.80081 0.74002 0.82788 1.17173 1.16810 1.16965 1.83669 1.16521 1.35273 1.71608 0.88975 0.90083 0.87024 0.76572 0.89113 0.90899 0.90966 0.89776 0.90015 0.90310 0.90269 0.91828 0.91694 0.91967 0.92031 0.90477 0.90369 0.90093 0.90137 0.91166 0.91575 0.82278 0.84586 0.77063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.03 9.89 36.00 0.36 0.33 16 2 C 0.09 0.19 7.37 -34.97 -0.26 -0.07 16 3 C -0.25 -0.54 6.31 -103.28 -0.65 -1.19 16 4 C 0.59 1.75 7.53 -12.54 -0.09 1.65 16 5 O -0.54 -3.02 14.46 5.27 0.08 -2.94 16 6 N -0.72 -0.23 5.03 -55.30 -0.28 -0.51 16 7 C 0.14 0.00 1.96 -68.35 -0.13 -0.13 16 8 C -0.12 0.20 5.11 -26.23 -0.13 0.07 16 9 C -0.41 0.76 4.95 37.87 0.19 0.95 16 10 Si 0.99 -2.05 10.59 -169.99 -1.80 -3.85 16 11 C -0.41 0.31 5.95 38.99 0.23 0.54 16 12 C -0.12 0.03 5.97 -24.49 -0.15 -0.12 16 13 C -0.12 0.04 6.09 -24.89 -0.15 -0.11 16 14 C -0.41 0.48 5.84 38.59 0.23 0.70 16 15 C -0.41 0.23 4.96 37.87 0.19 0.42 16 16 C -0.12 -0.02 5.24 -26.23 -0.14 -0.15 16 17 C -0.15 -0.06 10.46 -37.45 -0.39 -0.45 16 18 C -0.06 -0.03 6.20 -35.74 -0.22 -0.25 16 19 C -0.04 0.06 2.98 36.00 0.11 0.16 16 20 O -0.53 0.61 12.86 -35.23 -0.45 0.15 16 21 Si 0.96 -0.88 27.37 -169.99 -4.65 -5.53 16 22 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 23 H -0.24 0.05 7.11 56.52 0.40 0.45 16 24 H -0.25 -0.09 7.11 56.52 0.40 0.32 16 25 O -0.17 -0.31 8.89 7.66 0.07 -0.24 16 26 H 0.09 -0.04 8.14 -51.93 -0.42 -0.47 16 27 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.11 0.16 6.49 -51.93 -0.34 -0.17 16 29 H 0.40 -0.77 7.75 -40.82 -0.32 -1.09 16 30 H 0.09 0.15 7.29 -51.93 -0.38 -0.23 16 31 H 0.07 -0.12 8.13 -51.93 -0.42 -0.55 16 32 H 0.07 -0.20 7.76 -51.93 -0.40 -0.61 16 33 H 0.08 -0.19 7.97 -51.93 -0.41 -0.60 16 34 H 0.08 -0.13 7.97 -51.93 -0.41 -0.54 16 35 H 0.08 -0.07 8.04 -51.93 -0.42 -0.48 16 36 H 0.08 -0.06 8.04 -51.93 -0.42 -0.47 16 37 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 39 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 40 H 0.06 -0.03 8.14 -51.92 -0.42 -0.46 16 41 H 0.08 -0.08 8.03 -51.93 -0.42 -0.50 16 42 H 0.08 -0.12 8.03 -51.93 -0.42 -0.54 16 43 H 0.08 0.01 7.97 -51.93 -0.41 -0.40 16 44 H 0.08 -0.06 7.98 -51.92 -0.41 -0.47 16 45 H 0.07 0.16 7.82 -51.93 -0.41 -0.24 16 46 H 0.07 -0.07 7.77 -51.93 -0.40 -0.47 16 47 H 0.16 -0.29 7.74 -52.49 -0.41 -0.69 16 48 H 0.14 -0.40 7.96 -51.93 -0.41 -0.82 16 49 H 0.38 -1.55 8.70 45.56 0.40 -1.15 16 LS Contribution 387.60 15.07 5.84 5.84 Total: 0.00 -6.39 387.60 -9.97 -16.37 By element: Atomic # 1 Polarization: -3.89 SS G_CDS: -7.75 Total: -11.64 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: -1.03 Total: 2.36 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -0.28 Total: -0.51 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.31 Total: -3.03 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: -6.45 Total: -9.38 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -6.39 -9.97 -16.37 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_13308374.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.751 kcal (2) G-P(sol) polarization free energy of solvation -6.395 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.146 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.970 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds