Wall clock time and date at job start Thu Mar 4 2021 13:40:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86296 * 109.46936 * 2 1 4 4 H 1.48495 * 109.47317 * 300.00286 * 3 2 1 5 5 H 1.48504 * 109.47264 * 60.00305 * 3 2 1 6 6 H 1.48501 * 109.47183 * 180.02562 * 3 2 1 7 7 C 1.50702 * 109.46728 * 240.00527 * 2 1 3 8 8 C 1.38058 * 119.80085 * 299.99437 * 7 2 1 9 9 C 1.38712 * 120.08395 * 179.97438 * 8 7 2 10 10 O 1.35644 * 120.15306 * 180.02562 * 9 8 7 11 11 C 1.40140 * 119.69772 * 0.02562 * 9 8 7 12 12 C 1.47531 * 120.19204 * 179.97438 * 11 9 8 13 13 O 1.21583 * 120.00091 * 0.02562 * 12 11 9 14 14 N 1.34782 * 119.99780 * 179.97438 * 12 11 9 15 15 C 1.46506 * 119.99569 * 179.97438 * 14 12 11 16 16 C 1.52588 * 108.90847 * 204.99993 * 15 14 12 17 17 C 1.54362 * 109.20169 * 161.59307 * 16 15 14 18 18 Si 1.85204 * 107.14387 * 56.67478 * 17 16 15 19 19 C 1.87761 * 111.39232 * 193.23530 * 18 17 16 20 20 C 1.56407 * 98.97303 * 221.43794 * 19 18 17 21 21 C 1.53779 * 109.77706 * 39.35984 * 20 19 18 22 22 C 1.55690 * 111.40408 * 312.19566 * 21 20 19 23 23 C 1.85277 * 109.97989 * 317.33870 * 18 17 16 24 24 C 1.52591 * 108.83320 * 82.24148 * 15 14 12 25 25 C 1.39714 * 119.61701 * 0.25842 * 11 9 8 26 26 C 1.37794 * 119.90774 * 359.48331 * 25 11 9 27 27 H 0.96700 * 114.00386 * 59.99767 * 1 2 3 28 28 H 1.08999 * 109.47169 * 120.00073 * 2 1 3 29 29 H 1.08003 * 119.96054 * 0.02562 * 8 7 2 30 30 H 0.96700 * 114.00332 * 269.97763 * 10 9 8 31 31 H 0.96998 * 120.00003 * 0.02562 * 14 12 11 32 32 H 1.08998 * 108.89064 * 323.64291 * 15 14 12 33 33 H 1.09003 * 109.51691 * 41.68235 * 16 15 14 34 34 H 1.08998 * 109.56693 * 281.54017 * 16 15 14 35 35 H 1.09002 * 109.93522 * 176.10916 * 17 16 15 36 36 H 1.09000 * 109.93236 * 297.24332 * 17 16 15 37 37 H 1.09004 * 111.48939 * 338.87885 * 19 18 17 38 38 H 1.08995 * 111.49490 * 103.99331 * 19 18 17 39 39 H 1.08995 * 109.41788 * 279.26608 * 20 19 18 40 40 H 1.08998 * 109.42029 * 159.45540 * 20 19 18 41 41 H 1.08998 * 109.10136 * 191.67900 * 21 20 19 42 42 H 1.09007 * 109.09995 * 72.71222 * 21 20 19 43 43 H 1.08997 * 111.14134 * 270.09921 * 22 21 20 44 44 H 1.08999 * 111.17949 * 145.89816 * 22 21 20 45 45 H 1.08996 * 109.86118 * 283.27731 * 23 18 17 46 46 H 1.09008 * 110.01933 * 162.13210 * 23 18 17 47 47 H 1.08997 * 109.51931 * 318.37097 * 24 15 14 48 48 H 1.09005 * 109.51419 * 78.53757 * 24 15 14 49 49 H 1.07997 * 120.04727 * 179.72701 * 25 11 9 50 50 H 1.07995 * 119.84752 * 180.23351 * 26 25 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 1 1.5549 2.4565 -1.2124 5 1 1.5550 2.4565 1.2126 6 1 3.5350 1.7565 -0.0006 7 6 1.9313 -0.7103 -1.2306 8 6 1.5953 -2.0321 -1.4450 9 6 2.0539 -2.6915 -2.5759 10 8 1.7242 -3.9900 -2.7883 11 6 2.8594 -2.0099 -3.4982 12 6 3.3537 -2.7008 -4.7044 13 8 3.0619 -3.8646 -4.9009 14 7 4.1277 -2.0414 -5.5891 15 6 4.6190 -2.7276 -6.7867 16 6 5.8974 -2.0421 -7.2600 17 6 6.6654 -2.9943 -8.2014 18 14 5.5142 -3.4441 -9.5807 19 6 6.1705 -4.8956 -10.5747 20 6 5.8151 -4.3883 -12.0109 21 6 6.0798 -2.8767 -12.1092 22 6 5.4665 -2.1126 -10.8992 23 6 3.8241 -3.7929 -8.9065 24 6 3.5238 -2.7092 -7.8491 25 6 3.1967 -0.6742 -3.2657 26 6 2.7279 -0.0332 -2.1396 27 1 -0.3934 0.4417 -0.7650 28 1 1.7924 -0.5138 0.8900 29 1 0.9739 -2.5532 -0.7317 30 1 2.3501 -4.6219 -2.4088 31 1 4.3601 -1.1128 -5.4325 32 1 4.8466 -3.7627 -6.5319 33 1 6.5209 -1.8000 -6.3993 34 1 5.6442 -1.1269 -7.7952 35 1 7.5459 -2.4913 -8.6012 36 1 6.9643 -3.8915 -7.6593 37 1 7.2468 -5.0126 -10.4474 38 1 5.6403 -5.8169 -10.3339 39 1 4.7628 -4.5860 -12.2149 40 1 6.4299 -4.9123 -12.7428 41 1 5.6397 -2.4967 -13.0312 42 1 7.1558 -2.7037 -12.1321 43 1 4.4426 -1.8027 -11.1080 44 1 6.0837 -1.2592 -10.6186 45 1 3.8066 -4.7792 -8.4430 46 1 3.0858 -3.7455 -9.7072 47 1 2.5601 -2.9129 -7.3823 48 1 3.4976 -1.7304 -8.3281 49 1 3.8207 -0.1436 -3.9696 50 1 2.9861 1.0004 -1.9628 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15739290_13422076.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:26 Heat of formation + Delta-G solvation = -135.294672 kcal Electronic energy + Delta-G solvation = -28661.085761 eV Core-core repulsion = 24775.911459 eV Total energy + Delta-G solvation = -3885.174302 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 349.167 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.65256 -40.17616 -38.54988 -37.59387 -37.16153 -36.20798 -34.16461 -32.44863 -32.16048 -31.13501 -29.77347 -27.95853 -26.50765 -24.79652 -23.96930 -23.67615 -23.35443 -21.75901 -21.37863 -20.98557 -19.41078 -18.65720 -18.35883 -17.47556 -16.71012 -16.45171 -16.29820 -16.18642 -16.08374 -16.00134 -15.75774 -15.52783 -15.39361 -15.19206 -14.88635 -14.55443 -14.26763 -13.93089 -13.72892 -13.46007 -13.36711 -13.22820 -13.21369 -12.91878 -12.85630 -12.46222 -12.43211 -12.25458 -12.20808 -12.19247 -12.11481 -12.01721 -11.81587 -11.57725 -11.41070 -10.81005 -10.56407 -10.43843 -10.38821 -10.25101 -10.12293 -9.99067 -9.77560 -0.40505 0.09360 1.01034 1.32639 1.39503 1.66366 1.76519 1.78994 1.80838 1.82825 2.10851 2.57720 2.59407 3.10885 3.33330 3.42565 3.60045 3.64588 3.75660 3.94122 4.02357 4.05584 4.09785 4.12167 4.20759 4.26566 4.35896 4.36865 4.40003 4.56055 4.56925 4.59016 4.63416 4.68561 4.71397 4.80492 4.95075 4.99939 5.04189 5.06951 5.09883 5.14885 5.16320 5.18155 5.25781 5.27583 5.31802 5.39323 5.46762 5.47132 5.52043 5.56057 6.41848 6.49353 6.71653 7.26695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.086 4.086 3 Si 0.952 3.048 4 H -0.250 1.250 5 H -0.252 1.252 6 H -0.249 1.249 7 C -0.077 4.077 8 C -0.126 4.126 9 C 0.173 3.827 10 O -0.476 6.476 11 C -0.164 4.164 12 C 0.558 3.442 13 O -0.516 6.516 14 N -0.727 5.727 15 C 0.136 3.864 16 C -0.117 4.117 17 C -0.406 4.406 18 Si 0.990 3.010 19 C -0.407 4.407 20 C -0.122 4.122 21 C -0.118 4.118 22 C -0.405 4.405 23 C -0.406 4.406 24 C -0.117 4.117 25 C -0.065 4.065 26 C -0.145 4.145 27 H 0.378 0.622 28 H 0.123 0.877 29 H 0.143 0.857 30 H 0.398 0.602 31 H 0.397 0.603 32 H 0.091 0.909 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.084 0.916 36 H 0.081 0.919 37 H 0.078 0.922 38 H 0.079 0.921 39 H 0.063 0.937 40 H 0.064 0.936 41 H 0.062 0.938 42 H 0.061 0.939 43 H 0.076 0.924 44 H 0.077 0.923 45 H 0.080 0.920 46 H 0.080 0.920 47 H 0.070 0.930 48 H 0.066 0.934 49 H 0.133 0.867 50 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.396 4.004 0.237 5.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.197 4.197 3 Si 0.774 3.226 4 H -0.173 1.173 5 H -0.176 1.176 6 H -0.173 1.173 7 C -0.078 4.078 8 C -0.145 4.145 9 C 0.126 3.874 10 O -0.287 6.287 11 C -0.168 4.168 12 C 0.345 3.655 13 O -0.391 6.391 14 N -0.379 5.379 15 C 0.032 3.968 16 C -0.155 4.155 17 C -0.492 4.492 18 Si 1.184 2.816 19 C -0.493 4.493 20 C -0.159 4.159 21 C -0.156 4.156 22 C -0.491 4.491 23 C -0.493 4.493 24 C -0.155 4.155 25 C -0.084 4.084 26 C -0.162 4.162 27 H 0.226 0.774 28 H 0.141 0.859 29 H 0.160 0.840 30 H 0.256 0.744 31 H 0.233 0.767 32 H 0.109 0.891 33 H 0.091 0.909 34 H 0.090 0.910 35 H 0.102 0.898 36 H 0.100 0.900 37 H 0.097 0.903 38 H 0.097 0.903 39 H 0.082 0.918 40 H 0.083 0.917 41 H 0.080 0.920 42 H 0.080 0.920 43 H 0.095 0.905 44 H 0.096 0.904 45 H 0.099 0.901 46 H 0.099 0.901 47 H 0.089 0.911 48 H 0.084 0.916 49 H 0.151 0.849 50 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.091 3.904 0.397 4.995 hybrid contribution 0.294 0.087 -0.376 0.486 sum 3.386 3.991 0.021 5.234 Atomic orbital electron populations 1.86543 1.16707 1.81601 1.49180 1.25105 0.85503 1.10939 0.98130 0.85638 0.80492 0.74865 0.81574 1.17315 1.17559 1.17270 1.20426 0.96628 0.94334 0.96426 1.21343 1.01275 0.94695 0.97188 1.18518 0.91776 0.85944 0.91164 1.84761 1.51587 1.12370 1.79968 1.20458 1.02872 0.95620 0.97872 1.18039 0.78486 0.86444 0.82550 1.90834 1.56222 1.16018 1.76073 1.46092 1.52782 1.15698 1.23359 1.21126 0.93114 0.98243 0.84342 1.21590 0.94975 0.98832 1.00086 1.26136 1.08548 1.03311 1.11241 0.79788 0.67153 0.68053 0.66568 1.26649 1.05615 1.11812 1.05232 1.22025 1.01603 0.95201 0.97120 1.21840 1.00920 0.94267 0.98558 1.26502 1.03380 1.09075 1.10188 1.26175 1.17585 1.01894 1.03604 1.21684 0.99131 0.98991 0.95738 1.21131 0.97586 0.92810 0.96833 1.20975 0.99977 1.00206 0.95085 0.77423 0.85936 0.83956 0.74368 0.76749 0.89116 0.90932 0.90959 0.89761 0.90001 0.90314 0.90256 0.91816 0.91683 0.91960 0.92034 0.90469 0.90386 0.90090 0.90118 0.91104 0.91579 0.84915 0.85336 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.28 12.76 -35.23 -0.45 -0.17 16 2 C -0.09 0.14 2.81 36.01 0.10 0.24 16 3 Si 0.95 -1.87 25.05 -169.99 -4.26 -6.13 16 4 H -0.25 0.46 7.11 56.52 0.40 0.86 16 5 H -0.25 0.06 7.11 56.52 0.40 0.46 16 6 H -0.25 0.42 7.11 56.52 0.40 0.82 16 7 C -0.08 0.05 5.39 -104.57 -0.56 -0.51 16 8 C -0.13 -0.06 9.53 -39.47 -0.38 -0.44 16 9 C 0.17 0.33 6.72 -38.69 -0.26 0.07 16 10 O -0.48 -1.35 11.58 -40.51 -0.47 -1.82 16 11 C -0.16 -0.22 5.89 -104.84 -0.62 -0.83 16 12 C 0.56 1.47 7.48 -12.47 -0.09 1.37 16 13 O -0.52 -3.17 14.77 -16.59 -0.24 -3.41 16 14 N -0.73 0.22 4.99 -55.26 -0.28 -0.05 16 15 C 0.14 -0.03 1.96 -68.35 -0.13 -0.17 16 16 C -0.12 0.26 5.11 -26.23 -0.13 0.12 16 17 C -0.41 0.88 4.95 37.87 0.19 1.06 16 18 Si 0.99 -2.14 10.58 -169.99 -1.80 -3.94 16 19 C -0.41 0.33 5.95 38.99 0.23 0.56 16 20 C -0.12 0.03 5.97 -24.49 -0.15 -0.11 16 21 C -0.12 0.05 6.09 -24.89 -0.15 -0.10 16 22 C -0.41 0.52 5.84 38.59 0.23 0.75 16 23 C -0.41 0.18 4.96 37.87 0.19 0.36 16 24 C -0.12 -0.02 5.24 -26.23 -0.14 -0.16 16 25 C -0.06 0.08 9.54 -39.19 -0.37 -0.30 16 26 C -0.14 0.19 8.64 -39.63 -0.34 -0.15 16 27 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 28 H 0.12 -0.31 7.96 -51.93 -0.41 -0.72 16 29 H 0.14 0.01 8.06 -52.48 -0.42 -0.41 16 30 H 0.40 -0.36 9.06 45.56 0.41 0.06 16 31 H 0.40 -1.23 6.61 -40.82 -0.27 -1.50 16 32 H 0.09 0.13 7.29 -51.93 -0.38 -0.24 16 33 H 0.07 -0.17 8.13 -51.93 -0.42 -0.60 16 34 H 0.07 -0.24 7.77 -51.93 -0.40 -0.64 16 35 H 0.08 -0.22 7.97 -51.93 -0.41 -0.63 16 36 H 0.08 -0.15 7.97 -51.93 -0.41 -0.57 16 37 H 0.08 -0.07 8.04 -51.93 -0.42 -0.49 16 38 H 0.08 -0.05 8.04 -51.93 -0.42 -0.47 16 39 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 40 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 41 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 42 H 0.06 -0.04 8.14 -51.92 -0.42 -0.46 16 43 H 0.08 -0.09 8.03 -51.93 -0.42 -0.50 16 44 H 0.08 -0.13 8.03 -51.93 -0.42 -0.55 16 45 H 0.08 0.03 7.97 -51.93 -0.41 -0.38 16 46 H 0.08 -0.04 7.98 -51.92 -0.41 -0.45 16 47 H 0.07 0.19 7.82 -51.93 -0.41 -0.21 16 48 H 0.07 -0.08 7.76 -51.93 -0.40 -0.48 16 49 H 0.13 -0.55 6.40 -52.49 -0.34 -0.89 16 50 H 0.13 -0.38 4.85 -52.49 -0.25 -0.63 16 LS Contribution 390.11 15.07 5.88 5.88 Total: 0.00 -8.07 390.11 -10.73 -18.80 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -6.71 Total: -10.94 kcal Atomic # 6 Polarization: 4.17 SS G_CDS: -2.40 Total: 1.78 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.28 Total: -0.05 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.16 Total: -5.40 kcal Atomic # 14 Polarization: -4.01 SS G_CDS: -6.06 Total: -10.07 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -8.07 -10.73 -18.80 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_13422076.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -116.495 kcal (2) G-P(sol) polarization free energy of solvation -8.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.569 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.295 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds