Wall clock time and date at job start Thu Mar 4 2021 13:40:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38505 * 119.84877 * 2 1 4 4 C 1.38100 * 120.38732 * 180.02562 * 3 2 1 5 5 C 1.50703 * 119.95566 * 179.97438 * 4 3 2 6 6 O 1.42907 * 109.47059 * 104.99566 * 5 4 3 7 7 Si 1.86300 * 109.47125 * 344.99791 * 5 4 3 8 8 H 1.48504 * 109.47035 * 59.99834 * 7 5 4 9 9 H 1.48503 * 109.47066 * 179.97438 * 7 5 4 10 10 H 1.48497 * 109.47189 * 299.99870 * 7 5 4 11 11 C 1.38661 * 120.08411 * 359.73568 * 4 3 2 12 12 O 1.35660 * 120.14970 * 180.25833 * 11 4 3 13 13 C 1.40170 * 119.70236 * 0.53330 * 11 4 3 14 14 C 1.47543 * 120.19536 * 179.74430 * 13 11 4 15 15 O 1.21586 * 119.99843 * 359.72630 * 14 13 11 16 16 N 1.34775 * 120.00203 * 179.72349 * 14 13 11 17 17 C 1.46499 * 119.99864 * 180.02562 * 16 14 13 18 18 C 1.52583 * 108.90617 * 155.00013 * 17 16 14 19 19 C 1.54367 * 109.20507 * 198.48394 * 18 17 16 20 20 Si 1.85204 * 107.13613 * 303.23312 * 19 18 17 21 21 C 1.87766 * 111.37599 * 278.87668 * 20 19 18 22 22 C 1.56399 * 98.96833 * 221.41613 * 21 20 19 23 23 C 1.53785 * 109.77909 * 39.36773 * 22 21 20 24 24 C 1.55689 * 111.39582 * 312.19180 * 23 22 21 25 25 C 1.85448 * 109.90127 * 42.80999 * 20 19 18 26 26 C 1.52600 * 108.90584 * 277.82178 * 17 16 14 27 27 C 1.37829 * 119.85130 * 180.02562 * 2 1 3 28 28 H 1.09004 * 109.47155 * 269.98562 * 1 2 3 29 29 H 1.09000 * 109.47090 * 29.97983 * 1 2 3 30 30 H 1.09001 * 109.47099 * 149.98109 * 1 2 3 31 31 H 1.07998 * 119.80639 * 359.97252 * 3 2 1 32 32 H 1.08993 * 109.46943 * 224.99637 * 5 4 3 33 33 H 0.96697 * 114.00109 * 300.00120 * 6 5 4 34 34 H 0.96704 * 113.99856 * 270.27502 * 12 11 4 35 35 H 0.96998 * 119.99670 * 0.02562 * 16 14 13 36 36 H 1.09001 * 108.88854 * 36.36644 * 17 16 14 37 37 H 1.09004 * 109.51844 * 78.56930 * 18 17 16 38 38 H 1.08997 * 109.56170 * 318.42834 * 18 17 16 39 39 H 1.09002 * 109.93461 * 62.66657 * 19 18 17 40 40 H 1.09000 * 109.93538 * 183.80228 * 19 18 17 41 41 H 1.08996 * 111.49312 * 338.85761 * 21 20 19 42 42 H 1.09000 * 111.49563 * 103.97491 * 21 20 19 43 43 H 1.09003 * 109.41964 * 279.27343 * 22 21 20 44 44 H 1.08998 * 109.42027 * 159.46271 * 22 21 20 45 45 H 1.09007 * 109.09901 * 191.67786 * 23 22 21 46 46 H 1.09001 * 109.10093 * 72.70316 * 23 22 21 47 47 H 1.09002 * 111.14320 * 270.09108 * 24 23 22 48 48 H 1.09002 * 111.18143 * 145.90531 * 24 23 22 49 49 H 1.09005 * 109.91382 * 197.80574 * 25 20 19 50 50 H 1.08995 * 109.99877 * 76.63942 * 25 20 19 51 51 H 1.08997 * 109.51084 * 281.43254 * 26 17 16 52 52 H 1.08994 * 109.51319 * 41.54069 * 26 17 16 53 53 H 1.08001 * 120.04469 * 0.02855 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1964 1.2013 0.0000 4 6 3.5773 1.2143 -0.0005 5 6 4.3175 2.5270 -0.0011 6 8 4.8556 2.7710 1.3001 7 14 3.1445 3.9012 -0.4556 8 1 2.0393 3.9564 0.5348 9 1 3.8738 5.1948 -0.4556 10 1 2.5853 3.6477 -1.8077 11 6 4.2836 0.0211 0.0045 12 8 5.6402 0.0323 0.0092 13 6 3.5897 -1.1968 -0.0013 14 6 4.3304 -2.4729 -0.0017 15 8 5.5462 -2.4701 -0.0022 16 7 3.6592 -3.6416 -0.0016 17 6 4.3947 -4.9086 -0.0015 18 6 3.5114 -5.9929 0.6086 19 6 4.3942 -7.1831 1.0413 20 14 5.3230 -7.7472 -0.4585 21 6 4.2634 -8.8546 -1.5432 22 6 5.3366 -9.9293 -1.9164 23 6 6.2158 -10.2338 -0.6919 24 6 6.7091 -8.9253 -0.0074 25 6 5.9519 -6.2790 -1.4008 26 6 4.8128 -5.2377 -1.4318 27 6 2.1931 -1.1954 -0.0005 28 1 -0.3634 -0.0003 1.0277 29 1 -0.3633 0.8902 -0.5135 30 1 -0.3633 -0.8898 -0.5141 31 1 1.6508 2.1333 -0.0004 32 1 5.1286 2.4864 -0.7280 33 1 4.1888 2.8197 1.9987 34 1 6.0366 0.0379 -0.8728 35 1 2.6892 -3.6438 -0.0016 36 1 5.2900 -4.7968 0.6100 37 1 2.7841 -6.3289 -0.1305 38 1 2.9892 -5.5922 1.4774 39 1 5.0940 -6.8651 1.8141 40 1 3.7685 -7.9926 1.4172 41 1 3.4382 -9.2923 -0.9816 42 1 3.9053 -8.3246 -2.4258 43 1 5.9612 -9.5519 -2.7261 44 1 4.8376 -10.8426 -2.2403 45 1 7.0796 -10.8179 -1.0094 46 1 5.6382 -10.8161 0.0260 47 1 7.6586 -8.5950 -0.4288 48 1 6.7835 -9.0499 1.0729 49 1 6.2131 -6.5742 -2.4170 50 1 6.8246 -5.8604 -0.8997 51 1 3.9608 -5.6460 -1.9753 52 1 5.1604 -4.3312 -1.9272 53 1 1.6514 -2.1298 -0.0014 RHF calculation, no. of doubly occupied orbitals= 66 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_13422088.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:40:51 Heat of formation + Delta-G solvation = -136.185812 kcal Electronic energy + Delta-G solvation = -31034.133680 eV Core-core repulsion = 26993.383116 eV Total energy + Delta-G solvation = -4040.750564 eV No. of doubly occupied orbitals = 66 Molecular weight (most abundant/longest-lived isotopes) = 363.182 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -41.79645 -40.32667 -38.15504 -37.84545 -37.48138 -36.14291 -34.29032 -33.04295 -32.41778 -32.07577 -29.68314 -27.58421 -27.19521 -26.74750 -24.99607 -24.38865 -23.59935 -22.08712 -21.63534 -21.30157 -20.86584 -19.66701 -18.38297 -18.11678 -17.49191 -16.85270 -16.70975 -16.25197 -16.09995 -15.99441 -15.85902 -15.67680 -15.53405 -15.15423 -15.01086 -14.89712 -14.50983 -14.42572 -14.18723 -13.73033 -13.64974 -13.39397 -13.35742 -13.21785 -13.08916 -12.91135 -12.81166 -12.55669 -12.38270 -12.25414 -12.20082 -12.14909 -12.11872 -11.94379 -11.79716 -11.73276 -11.65759 -11.35302 -10.96657 -10.39377 -10.38108 -10.30892 -10.19028 -10.17806 -9.97840 -9.51353 -0.36025 0.06763 1.11517 1.41202 1.50914 1.72160 1.78547 1.88694 1.89844 1.96165 2.09607 2.56240 2.66829 3.16979 3.40469 3.53485 3.64921 3.73303 3.79606 4.04856 4.10737 4.11605 4.15467 4.16461 4.22016 4.31902 4.39088 4.41580 4.49945 4.50845 4.61711 4.63671 4.65642 4.70908 4.79395 4.81054 4.84450 4.86688 4.96745 5.10640 5.13229 5.14572 5.16107 5.21190 5.21596 5.23663 5.26849 5.36153 5.38474 5.39929 5.45002 5.50803 5.54322 5.59991 5.66466 6.49514 6.67971 6.73555 7.19039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.095 4.095 3 C -0.090 4.090 4 C -0.158 4.158 5 C -0.082 4.082 6 O -0.552 6.552 7 Si 0.990 3.010 8 H -0.237 1.237 9 H -0.276 1.276 10 H -0.249 1.249 11 C 0.165 3.835 12 O -0.489 6.489 13 C -0.180 4.180 14 C 0.553 3.447 15 O -0.563 6.563 16 N -0.712 5.712 17 C 0.134 3.866 18 C -0.113 4.113 19 C -0.411 4.411 20 Si 1.051 2.949 21 C -0.405 4.405 22 C -0.128 4.128 23 C -0.123 4.123 24 C -0.427 4.427 25 C -0.421 4.421 26 C -0.114 4.114 27 C -0.061 4.061 28 H 0.084 0.916 29 H 0.077 0.923 30 H 0.086 0.914 31 H 0.148 0.852 32 H 0.112 0.888 33 H 0.386 0.614 34 H 0.401 0.599 35 H 0.413 0.587 36 H 0.063 0.937 37 H 0.096 0.904 38 H 0.078 0.922 39 H 0.074 0.926 40 H 0.098 0.902 41 H 0.087 0.913 42 H 0.084 0.916 43 H 0.062 0.938 44 H 0.064 0.936 45 H 0.054 0.946 46 H 0.065 0.935 47 H 0.070 0.930 48 H 0.079 0.921 49 H 0.080 0.920 50 H 0.063 0.937 51 H 0.088 0.912 52 H 0.041 0.959 53 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.509 -1.481 -1.604 9.756 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.095 4.095 3 C -0.107 4.107 4 C -0.159 4.159 5 C -0.191 4.191 6 O -0.359 6.359 7 Si 0.812 3.188 8 H -0.161 1.161 9 H -0.202 1.202 10 H -0.173 1.173 11 C 0.119 3.881 12 O -0.301 6.301 13 C -0.184 4.184 14 C 0.341 3.659 15 O -0.442 6.442 16 N -0.364 5.364 17 C 0.030 3.970 18 C -0.151 4.151 19 C -0.498 4.498 20 Si 1.241 2.759 21 C -0.492 4.492 22 C -0.165 4.165 23 C -0.160 4.160 24 C -0.512 4.512 25 C -0.506 4.506 26 C -0.153 4.153 27 C -0.080 4.080 28 H 0.102 0.898 29 H 0.096 0.904 30 H 0.104 0.896 31 H 0.166 0.834 32 H 0.130 0.870 33 H 0.234 0.766 34 H 0.260 0.740 35 H 0.251 0.749 36 H 0.082 0.918 37 H 0.114 0.886 38 H 0.096 0.904 39 H 0.093 0.907 40 H 0.116 0.884 41 H 0.106 0.894 42 H 0.102 0.898 43 H 0.080 0.920 44 H 0.083 0.917 45 H 0.073 0.927 46 H 0.084 0.916 47 H 0.088 0.912 48 H 0.098 0.902 49 H 0.099 0.901 50 H 0.082 0.918 51 H 0.106 0.894 52 H 0.060 0.940 53 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -8.692 -0.806 -1.545 8.865 hybrid contribution 0.470 -0.393 -0.153 0.632 sum -8.222 -1.199 -1.698 8.480 Atomic orbital electron populations 1.20923 0.88047 1.04593 1.03822 1.20114 0.98102 0.91790 0.99495 1.21398 0.92443 0.99722 0.97176 1.20755 0.94533 0.95554 1.05057 1.25123 1.05618 0.99170 0.89206 1.86552 1.38213 1.94238 1.16862 0.85155 0.76904 0.75647 0.81104 1.16073 1.20168 1.17274 1.18528 0.83606 0.90747 0.95268 1.84771 1.15229 1.96049 1.34043 1.20478 0.95105 0.92686 1.10120 1.18342 0.86986 0.84452 0.76114 1.90807 1.14949 1.87920 1.50515 1.45974 1.10956 1.04780 1.74729 1.21160 0.95818 0.82971 0.97020 1.21598 0.97886 0.93865 1.01754 1.26199 1.07190 1.02242 1.14190 0.78890 0.66365 0.64460 0.66165 1.26699 1.04236 1.07920 1.10299 1.22076 0.96873 0.99741 0.97841 1.21888 0.99099 0.97761 0.97289 1.26713 1.12116 1.08794 1.03588 1.26428 1.01895 1.12747 1.09535 1.21667 0.99006 0.98789 0.95792 1.21434 0.91011 0.99842 0.95697 0.89766 0.90358 0.89556 0.83421 0.87011 0.76550 0.74028 0.74911 0.91848 0.88564 0.90356 0.90745 0.88353 0.89440 0.89753 0.91963 0.91720 0.92690 0.91625 0.91151 0.90203 0.90115 0.91810 0.89367 0.94003 0.82152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.07 10.00 71.24 0.71 1.78 16 2 C -0.09 0.35 5.87 -19.90 -0.12 0.24 16 3 C -0.09 0.16 8.30 22.30 0.19 0.35 16 4 C -0.16 -0.37 5.27 -19.80 -0.10 -0.47 16 5 C -0.08 -0.11 2.37 71.24 0.17 0.06 16 6 O -0.55 -2.60 12.88 -148.98 -1.92 -4.52 16 7 Si 0.99 -2.07 25.49 68.60 1.75 -0.33 16 8 H -0.24 1.04 6.73 99.48 0.67 1.71 16 9 H -0.28 -0.59 7.11 99.48 0.71 0.11 16 10 H -0.25 0.50 7.11 99.48 0.71 1.21 16 11 C 0.17 1.13 6.69 22.84 0.15 1.28 16 12 O -0.49 -5.13 10.91 -68.84 -0.75 -5.89 16 13 C -0.18 -0.81 5.89 -20.01 -0.12 -0.93 16 14 C 0.55 4.29 7.48 86.70 0.65 4.94 16 15 O -0.56 -9.26 14.77 16.93 0.25 -9.01 16 16 N -0.71 -0.16 4.99 -446.99 -2.23 -2.39 16 17 C 0.13 0.07 1.96 44.72 0.09 0.16 16 18 C -0.11 0.59 5.11 30.92 0.16 0.75 16 19 C -0.41 1.94 4.95 72.45 0.36 2.30 16 20 Si 1.05 -4.54 10.59 68.60 0.73 -3.81 16 21 C -0.41 1.66 5.95 73.17 0.43 2.10 16 22 C -0.13 0.16 5.97 32.04 0.19 0.35 16 23 C -0.12 0.02 6.10 31.79 0.19 0.21 16 24 C -0.43 0.25 5.84 72.91 0.43 0.67 16 25 C -0.42 -0.12 4.96 72.44 0.36 0.24 16 26 C -0.11 -0.09 5.24 30.92 0.16 0.07 16 27 C -0.06 0.17 9.18 22.52 0.21 0.37 16 28 H 0.08 -0.85 8.14 -2.38 -0.02 -0.87 16 29 H 0.08 -0.78 8.08 -2.39 -0.02 -0.80 16 30 H 0.09 -0.99 8.08 -2.39 -0.02 -1.01 16 31 H 0.15 -0.84 4.86 -2.91 -0.01 -0.85 16 32 H 0.11 0.11 7.83 -2.39 -0.02 0.09 16 33 H 0.39 -0.96 8.70 -74.06 -0.64 -1.61 16 34 H 0.40 1.60 9.06 -74.05 -0.67 0.92 16 35 H 0.41 -2.83 6.61 -92.71 -0.61 -3.45 16 36 H 0.06 0.40 7.28 -2.39 -0.02 0.39 16 37 H 0.10 -0.91 7.76 -2.38 -0.02 -0.93 16 38 H 0.08 -0.45 8.13 -2.39 -0.02 -0.47 16 39 H 0.07 -0.21 7.97 -2.39 -0.02 -0.23 16 40 H 0.10 -0.67 7.97 -2.39 -0.02 -0.69 16 41 H 0.09 -0.47 8.04 -2.39 -0.02 -0.49 16 42 H 0.08 -0.42 8.04 -2.39 -0.02 -0.43 16 43 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 44 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 45 H 0.05 0.05 8.14 -2.38 -0.02 0.03 16 46 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 47 H 0.07 0.05 8.03 -2.39 -0.02 0.03 16 48 H 0.08 -0.07 8.03 -2.39 -0.02 -0.09 16 49 H 0.08 -0.01 7.97 -2.38 -0.02 -0.03 16 50 H 0.06 0.24 7.97 -2.39 -0.02 0.22 16 51 H 0.09 -0.35 7.76 -2.39 -0.02 -0.37 16 52 H 0.04 0.27 7.82 -2.39 -0.02 0.25 16 53 H 0.16 -1.55 6.40 -2.91 -0.02 -1.57 16 Total: 0.00 -22.34 410.83 1.65 -20.68 By element: Atomic # 1 Polarization: -8.94 SS G_CDS: -0.28 Total: -9.22 kcal Atomic # 6 Polarization: 10.37 SS G_CDS: 4.11 Total: 14.48 kcal Atomic # 7 Polarization: -0.16 SS G_CDS: -2.23 Total: -2.39 kcal Atomic # 8 Polarization: -16.99 SS G_CDS: -2.42 Total: -19.41 kcal Atomic # 14 Polarization: -6.61 SS G_CDS: 2.48 Total: -4.14 kcal Total: -22.34 1.65 -20.68 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_13422088.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.503 kcal (2) G-P(sol) polarization free energy of solvation -22.337 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.682 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds