Wall clock time and date at job start Thu Mar 4 2021 13:53:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.47382 * 2 1 4 4 H 1.48498 * 109.46952 * 60.00222 * 3 2 1 5 5 H 1.48496 * 109.46999 * 180.02562 * 3 2 1 6 6 H 1.48497 * 109.47320 * 300.00244 * 3 2 1 7 7 C 1.50700 * 109.47375 * 120.00440 * 2 1 3 8 8 C 1.38261 * 119.94382 * 64.99430 * 7 2 1 9 9 C 1.38151 * 120.05674 * 180.02562 * 8 7 2 10 10 C 1.38735 * 119.94261 * 0.02562 * 9 8 7 11 11 O 1.35891 * 120.05856 * 179.97438 * 10 9 8 12 12 C 1.42896 * 117.00417 * 180.02562 * 11 10 9 13 13 C 1.52996 * 109.47285 * 180.02562 * 12 11 10 14 14 C 1.50696 * 109.47359 * 180.02562 * 13 12 11 15 15 O 1.21281 * 119.99854 * 359.97438 * 14 13 12 16 16 N 1.34775 * 120.00638 * 180.02562 * 14 13 12 17 17 C 1.46493 * 120.00608 * 179.97438 * 16 14 13 18 18 C 1.52586 * 108.91059 * 154.99735 * 17 16 14 19 19 C 1.54362 * 109.20981 * 198.48435 * 18 17 16 20 20 Si 1.85199 * 107.06814 * 303.27337 * 19 18 17 21 21 C 1.87430 * 111.55701 * 167.17538 * 20 19 18 22 22 C 1.55697 * 100.87968 * 121.64056 * 21 20 19 23 23 C 1.53840 * 111.36481 * 332.07181 * 22 21 20 24 24 C 1.56398 * 109.81410 * 47.74979 * 23 22 21 25 25 C 1.85203 * 110.00805 * 42.82291 * 20 19 18 26 26 C 1.52586 * 108.91341 * 277.81852 * 17 16 14 27 27 C 1.38736 * 119.88692 * 0.27710 * 10 9 8 28 28 C 1.38149 * 119.94072 * 359.46580 * 27 10 9 29 29 H 0.96700 * 114.00197 * 59.99328 * 1 2 3 30 30 H 1.09003 * 109.46934 * 240.00177 * 2 1 3 31 31 H 1.08001 * 119.97597 * 359.97438 * 8 7 2 32 32 H 1.07991 * 120.02685 * 179.97438 * 9 8 7 33 33 H 1.08998 * 109.46902 * 60.00267 * 12 11 10 34 34 H 1.09000 * 109.47075 * 300.00123 * 12 11 10 35 35 H 1.09000 * 109.47581 * 59.99850 * 13 12 11 36 36 H 1.09007 * 109.47274 * 300.00059 * 13 12 11 37 37 H 0.97009 * 119.99837 * 359.97438 * 16 14 13 38 38 H 1.09001 * 108.88843 * 36.36395 * 17 16 14 39 39 H 1.09006 * 109.51499 * 78.57205 * 18 17 16 40 40 H 1.08994 * 109.52036 * 318.40710 * 18 17 16 41 41 H 1.09002 * 109.93494 * 183.87952 * 19 18 17 42 42 H 1.08998 * 110.00192 * 62.70311 * 19 18 17 43 43 H 1.09002 * 111.14489 * 239.55751 * 21 20 19 44 44 H 1.08997 * 111.14261 * 3.72473 * 21 20 19 45 45 H 1.08995 * 109.10511 * 92.54664 * 22 21 20 46 46 H 1.09006 * 109.09924 * 211.52315 * 22 21 20 47 47 H 1.09007 * 109.38945 * 287.65199 * 23 22 21 48 48 H 1.08999 * 109.42161 * 167.86890 * 23 22 21 49 49 H 1.08998 * 111.49915 * 203.21349 * 24 23 22 50 50 H 1.09000 * 111.54323 * 78.10804 * 24 23 22 51 51 H 1.09001 * 109.93748 * 76.56224 * 25 20 19 52 52 H 1.08996 * 109.93797 * 197.79007 * 25 20 19 53 53 H 1.09001 * 109.51575 * 281.43938 * 26 17 16 54 54 H 1.09000 * 109.51117 * 41.59400 * 26 17 16 55 55 H 1.07997 * 120.02702 * 179.72010 * 27 10 9 56 56 H 1.08010 * 119.96928 * 180.23214 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 1 1.5552 2.4565 1.2125 5 1 3.5351 1.7564 -0.0006 6 1 1.5551 2.4566 -1.2124 7 6 1.9314 -0.7105 1.2304 8 6 1.6840 -2.0605 1.3971 9 6 2.1430 -2.7141 2.5244 10 6 2.8523 -2.0144 3.4898 11 8 3.3045 -2.6548 4.5998 12 6 4.0267 -1.8713 5.5519 13 6 4.4522 -2.7578 6.7241 14 6 5.2134 -1.9315 7.7284 15 8 5.3978 -0.7499 7.5264 16 7 5.6901 -2.5056 8.8508 17 6 6.4305 -1.7024 9.8269 18 6 6.3113 -2.3585 11.1993 19 6 6.6664 -1.3245 12.2891 20 14 8.3698 -0.7022 11.9136 21 6 8.7812 0.8265 12.9169 22 6 10.0526 0.3461 13.6765 23 6 10.0412 -1.1787 13.8800 24 6 9.6848 -1.8905 12.5337 25 6 8.5443 -0.3907 10.0963 26 6 7.8802 -1.5784 9.3674 27 6 3.0938 -0.6584 3.3232 28 6 2.6372 -0.0107 2.1915 29 1 -0.3933 0.4418 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.1307 -2.6045 0.6459 32 1 1.9492 -3.7685 2.6543 33 1 3.3899 -1.0659 5.9176 34 1 4.9118 -1.4478 5.0772 35 1 5.0892 -3.5631 6.3582 36 1 3.5673 -3.1818 7.1989 37 1 5.5429 -3.4507 9.0123 38 1 5.9893 -0.7067 9.8719 39 1 6.9986 -3.2024 11.2604 40 1 5.2898 -2.7083 11.3483 41 1 6.6519 -1.7989 13.2703 42 1 5.9554 -0.4987 12.2653 43 1 9.0069 1.6733 12.2687 44 1 7.9768 1.0694 13.6111 45 1 10.9369 0.6226 13.1024 46 1 10.0935 0.8364 14.6492 47 1 9.2984 -1.4376 14.6346 48 1 11.0254 -1.5071 14.2141 49 1 9.2749 -2.8860 12.7045 50 1 10.5412 -1.9253 11.8604 51 1 8.0409 0.5382 9.8284 52 1 9.5994 -0.3334 9.8287 53 1 8.4171 -2.4971 9.6039 54 1 7.9077 -1.4065 8.2913 55 1 3.6417 -0.1106 4.0755 56 1 2.8282 1.0441 2.0595 RHF calculation, no. of doubly occupied orbitals= 69 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15739290_4549602.mol2 56 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:53:33 Heat of formation + Delta-G solvation = -132.719551 kcal Electronic energy + Delta-G solvation = -31355.877503 eV Core-core repulsion = 27159.739629 eV Total energy + Delta-G solvation = -4196.137875 eV No. of doubly occupied orbitals = 69 Molecular weight (most abundant/longest-lived isotopes) = 377.198 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -41.43738 -40.92679 -39.13641 -37.94304 -37.22550 -36.14218 -34.16791 -33.14762 -32.07819 -32.04377 -31.49699 -29.68886 -27.42764 -26.29882 -25.32307 -24.63583 -23.62561 -23.45988 -22.09084 -21.65259 -21.30138 -20.84199 -19.53301 -18.45202 -17.88262 -17.55052 -17.45108 -17.05067 -16.77448 -16.22017 -16.04633 -15.87179 -15.81385 -15.68637 -15.52393 -15.07829 -14.84748 -14.72720 -14.46052 -14.39051 -14.23011 -14.06572 -13.66895 -13.61678 -13.37982 -13.22227 -13.11678 -12.94302 -12.92822 -12.76095 -12.43492 -12.32948 -12.17985 -12.15882 -12.13330 -11.95406 -11.95065 -11.74169 -11.73197 -11.67130 -11.35926 -11.04424 -10.36129 -10.30916 -10.29610 -10.18571 -10.06524 -10.04314 -9.22598 0.24530 0.28241 1.16220 1.42842 1.47629 1.53659 1.69128 1.80531 1.89050 1.90186 1.96707 2.49861 2.60911 2.67447 3.47986 3.56299 3.72349 3.75149 3.82270 3.87076 3.93652 4.01473 4.08717 4.12864 4.15017 4.20214 4.22700 4.30816 4.32226 4.40777 4.41104 4.49173 4.50652 4.63101 4.64978 4.66665 4.68067 4.70308 4.76759 4.82015 4.84618 4.93743 5.10544 5.13009 5.15418 5.16362 5.20252 5.23480 5.24842 5.26477 5.35683 5.39525 5.44780 5.48108 5.51161 5.54048 5.59875 5.69650 6.28878 6.49814 6.84252 7.19187 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.563 6.563 2 C -0.072 4.072 3 Si 0.970 3.030 4 H -0.276 1.276 5 H -0.262 1.262 6 H -0.251 1.251 7 C -0.126 4.126 8 C -0.055 4.055 9 C -0.155 4.155 10 C 0.122 3.878 11 O -0.318 6.318 12 C 0.072 3.928 13 C -0.132 4.132 14 C 0.516 3.484 15 O -0.584 6.584 16 N -0.713 5.713 17 C 0.132 3.868 18 C -0.114 4.114 19 C -0.411 4.411 20 Si 1.054 2.946 21 C -0.427 4.427 22 C -0.124 4.124 23 C -0.126 4.126 24 C -0.409 4.409 25 C -0.423 4.423 26 C -0.116 4.116 27 C -0.212 4.212 28 C -0.097 4.097 29 H 0.398 0.602 30 H 0.099 0.901 31 H 0.151 0.849 32 H 0.149 0.851 33 H 0.062 0.938 34 H 0.063 0.937 35 H 0.128 0.872 36 H 0.128 0.872 37 H 0.419 0.581 38 H 0.066 0.934 39 H 0.093 0.907 40 H 0.080 0.920 41 H 0.096 0.904 42 H 0.076 0.924 43 H 0.072 0.928 44 H 0.078 0.922 45 H 0.057 0.943 46 H 0.057 0.943 47 H 0.070 0.930 48 H 0.061 0.939 49 H 0.089 0.911 50 H 0.076 0.924 51 H 0.064 0.936 52 H 0.079 0.921 53 H 0.086 0.914 54 H 0.043 0.957 55 H 0.135 0.865 56 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.453 -4.954 1.061 5.087 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.183 4.183 3 Si 0.796 3.204 4 H -0.201 1.201 5 H -0.187 1.187 6 H -0.175 1.175 7 C -0.127 4.127 8 C -0.073 4.073 9 C -0.174 4.174 10 C 0.076 3.924 11 O -0.232 6.232 12 C -0.003 4.003 13 C -0.172 4.172 14 C 0.304 3.696 15 O -0.464 6.464 16 N -0.365 5.365 17 C 0.028 3.972 18 C -0.151 4.151 19 C -0.498 4.498 20 Si 1.244 2.756 21 C -0.512 4.512 22 C -0.162 4.162 23 C -0.163 4.163 24 C -0.495 4.495 25 C -0.508 4.508 26 C -0.155 4.155 27 C -0.231 4.231 28 C -0.115 4.115 29 H 0.248 0.752 30 H 0.117 0.883 31 H 0.168 0.832 32 H 0.166 0.834 33 H 0.080 0.920 34 H 0.082 0.918 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.256 0.744 38 H 0.084 0.916 39 H 0.111 0.889 40 H 0.098 0.902 41 H 0.114 0.886 42 H 0.095 0.905 43 H 0.091 0.909 44 H 0.096 0.904 45 H 0.076 0.924 46 H 0.076 0.924 47 H 0.089 0.911 48 H 0.080 0.920 49 H 0.108 0.892 50 H 0.095 0.905 51 H 0.083 0.917 52 H 0.098 0.902 53 H 0.105 0.895 54 H 0.062 0.938 55 H 0.153 0.847 56 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges 0.938 -3.778 1.502 4.173 hybrid contribution 0.057 0.339 -0.280 0.444 sum 0.995 -3.439 1.223 3.783 Atomic orbital electron populations 1.86465 1.17480 1.82115 1.51100 1.24615 0.85512 1.10024 0.98139 0.85417 0.79524 0.75557 0.79919 1.20107 1.18650 1.17493 1.19474 1.01400 0.94959 0.96849 1.21051 0.96103 0.93435 0.96673 1.20734 1.01423 1.01578 0.93645 1.19176 0.94807 0.91098 0.87296 1.85950 1.69324 1.38638 1.29295 1.22443 0.95683 0.93705 0.88480 1.21445 1.03129 0.99107 0.93485 1.20662 0.78633 0.87565 0.82779 1.90737 1.60082 1.18161 1.77449 1.46030 1.55757 1.14362 1.20345 1.21141 0.91762 0.95779 0.88531 1.21596 1.03912 0.98874 0.90737 1.26170 1.17702 1.03859 1.02031 0.78832 0.66668 0.66154 0.63918 1.26722 1.01383 1.14315 1.08768 1.21909 0.97969 0.95800 1.00501 1.22072 1.02207 0.93963 0.98102 1.26732 1.12513 1.08335 1.01911 1.26421 1.03327 1.00215 1.20829 1.21679 0.94742 0.99361 0.99678 1.21342 1.06739 0.94273 1.00697 1.20973 0.97495 0.99654 0.93347 0.75195 0.88345 0.83170 0.83366 0.91963 0.91848 0.85392 0.85444 0.74371 0.91563 0.88866 0.90179 0.88569 0.90498 0.90912 0.90360 0.92390 0.92433 0.91140 0.92042 0.89185 0.90501 0.91713 0.90199 0.89532 0.93837 0.84679 0.85607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.53 12.81 -148.98 -1.91 -2.44 16 2 C -0.07 -0.02 2.79 71.24 0.20 0.18 16 3 Si 0.97 0.78 25.14 68.60 1.72 2.51 16 4 H -0.28 -1.41 7.04 99.48 0.70 -0.71 16 5 H -0.26 -0.68 7.11 99.48 0.71 0.03 16 6 H -0.25 0.08 7.11 99.48 0.71 0.78 16 7 C -0.13 -0.64 5.38 -19.85 -0.11 -0.75 16 8 C -0.05 -0.21 9.68 22.25 0.22 0.01 16 9 C -0.16 -0.71 9.99 22.37 0.22 -0.49 16 10 C 0.12 0.82 6.69 22.51 0.15 0.97 16 11 O -0.32 -1.63 10.14 -92.32 -0.94 -2.56 16 12 C 0.07 0.21 4.03 71.98 0.29 0.50 16 13 C -0.13 0.41 6.07 29.85 0.18 0.59 16 14 C 0.52 0.99 7.55 87.66 0.66 1.65 16 15 O -0.58 -6.63 15.59 -3.03 -0.05 -6.68 16 16 N -0.71 2.49 5.04 -443.86 -2.24 0.26 16 17 C 0.13 -0.22 1.96 44.72 0.09 -0.14 16 18 C -0.11 0.75 5.11 30.92 0.16 0.91 16 19 C -0.41 2.36 4.96 72.44 0.36 2.72 16 20 Si 1.05 -5.33 10.56 68.60 0.72 -4.60 16 21 C -0.43 0.51 5.84 72.91 0.43 0.93 16 22 C -0.12 0.03 6.10 31.81 0.19 0.23 16 23 C -0.13 0.25 5.97 32.06 0.19 0.44 16 24 C -0.41 1.71 5.95 73.17 0.44 2.15 16 25 C -0.42 0.31 4.96 72.45 0.36 0.67 16 26 C -0.12 0.07 5.24 30.92 0.16 0.23 16 27 C -0.21 -1.49 9.04 22.37 0.20 -1.29 16 28 C -0.10 -0.63 8.66 22.25 0.19 -0.44 16 29 H 0.40 -3.30 8.74 -74.06 -0.65 -3.95 16 30 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 31 H 0.15 -0.03 8.06 -2.91 -0.02 -0.06 16 32 H 0.15 0.13 8.06 -2.92 -0.02 0.11 16 33 H 0.06 0.29 7.61 -2.39 -0.02 0.28 16 34 H 0.06 0.28 7.63 -2.39 -0.02 0.26 16 35 H 0.13 -0.91 8.14 -2.39 -0.02 -0.92 16 36 H 0.13 -0.89 8.14 -2.38 -0.02 -0.91 16 37 H 0.42 -4.34 8.58 -92.70 -0.80 -5.13 16 38 H 0.07 0.23 7.28 -2.39 -0.02 0.21 16 39 H 0.09 -0.95 7.76 -2.38 -0.02 -0.97 16 40 H 0.08 -0.58 8.13 -2.39 -0.02 -0.60 16 41 H 0.10 -0.71 7.97 -2.39 -0.02 -0.73 16 42 H 0.08 -0.33 7.97 -2.39 -0.02 -0.35 16 43 H 0.07 -0.01 8.03 -2.39 -0.02 -0.03 16 44 H 0.08 -0.12 8.03 -2.39 -0.02 -0.14 16 45 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 46 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 47 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 48 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 49 H 0.09 -0.56 8.04 -2.39 -0.02 -0.58 16 50 H 0.08 -0.27 8.04 -2.39 -0.02 -0.29 16 51 H 0.06 0.15 7.97 -2.39 -0.02 0.13 16 52 H 0.08 -0.07 7.97 -2.39 -0.02 -0.09 16 53 H 0.09 -0.41 7.76 -2.39 -0.02 -0.43 16 54 H 0.04 0.21 7.82 -2.39 -0.02 0.19 16 55 H 0.14 0.76 6.30 -2.91 -0.02 0.74 16 56 H 0.13 0.57 4.86 -2.91 -0.01 0.56 16 Total: 0.00 -19.93 435.90 2.08 -17.85 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: 0.17 Total: -13.40 kcal Atomic # 6 Polarization: 4.48 SS G_CDS: 4.58 Total: 9.06 kcal Atomic # 7 Polarization: 2.49 SS G_CDS: -2.24 Total: 0.26 kcal Atomic # 8 Polarization: -8.79 SS G_CDS: -2.89 Total: -11.68 kcal Atomic # 14 Polarization: -4.54 SS G_CDS: 2.45 Total: -2.09 kcal Total: -19.93 2.08 -17.85 kcal The number of atoms in the molecule is 56 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_4549602.mol2 56 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.867 kcal (2) G-P(sol) polarization free energy of solvation -19.929 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.796 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.077 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds