Wall clock time and date at job start Thu Mar 4 2021 14:24:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86296 * 109.47349 * 2 1 4 4 H 1.48504 * 109.47323 * 299.99990 * 3 2 1 5 5 H 1.48502 * 109.47058 * 59.99867 * 3 2 1 6 6 H 1.48496 * 109.47110 * 179.97438 * 3 2 1 7 7 C 1.50700 * 109.47066 * 240.00177 * 2 1 3 8 8 C 1.35446 * 125.56768 * 119.97730 * 7 2 1 9 9 C 1.39837 * 107.86635 * 180.02562 * 8 7 2 10 10 C 1.37868 * 107.08503 * 359.97438 * 9 8 7 11 11 C 1.46682 * 126.23310 * 179.97438 * 10 9 8 12 12 O 1.21693 * 119.99927 * 0.03240 * 11 10 9 13 13 N 1.34775 * 120.00045 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99864 * 180.02562 * 13 11 10 15 15 C 1.52583 * 108.90617 * 155.00013 * 14 13 11 16 16 C 1.54367 * 109.20507 * 198.48394 * 15 14 13 17 17 Si 1.85204 * 107.13613 * 303.23312 * 16 15 14 18 18 C 1.87766 * 111.37599 * 278.87668 * 17 16 15 19 19 C 1.56399 * 98.96833 * 221.41613 * 18 17 16 20 20 C 1.53785 * 109.77909 * 39.36773 * 19 18 17 21 21 C 1.55689 * 111.39582 * 312.19180 * 20 19 18 22 22 C 1.85448 * 109.90127 * 42.80999 * 17 16 15 23 23 C 1.52600 * 108.90584 * 277.82178 * 14 13 11 24 24 N 1.35539 * 125.56031 * 300.32703 * 7 2 1 25 25 H 0.96698 * 113.99573 * 59.99444 * 1 2 3 26 26 H 1.08998 * 109.46747 * 120.00426 * 2 1 3 27 27 H 1.08004 * 126.06439 * 359.97438 * 8 7 2 28 28 H 1.07999 * 126.45152 * 179.97438 * 9 8 7 29 29 H 0.96998 * 119.99670 * 0.02562 * 13 11 10 30 30 H 1.09001 * 108.88854 * 36.36644 * 14 13 11 31 31 H 1.09004 * 109.51844 * 78.56930 * 15 14 13 32 32 H 1.09004 * 109.52009 * 318.40000 * 15 14 13 33 33 H 1.09002 * 109.93461 * 62.66657 * 16 15 14 34 34 H 1.09000 * 109.93538 * 183.80228 * 16 15 14 35 35 H 1.08996 * 111.49312 * 338.85761 * 18 17 16 36 36 H 1.09000 * 111.49563 * 103.97491 * 18 17 16 37 37 H 1.09003 * 109.41964 * 279.27343 * 19 18 17 38 38 H 1.08998 * 109.42027 * 159.46271 * 19 18 17 39 39 H 1.09007 * 109.09901 * 191.67786 * 20 19 18 40 40 H 1.09001 * 109.10093 * 72.70316 * 20 19 18 41 41 H 1.09002 * 111.14320 * 270.09108 * 21 20 19 42 42 H 1.09002 * 111.18143 * 145.90531 * 21 20 19 43 43 H 1.09005 * 109.91382 * 197.80574 * 22 17 16 44 44 H 1.08995 * 109.99877 * 76.63942 * 22 17 16 45 45 H 1.08997 * 109.51084 * 281.43254 * 23 14 13 46 46 H 1.08992 * 109.51389 * 41.59209 * 23 14 13 47 47 H 0.96996 * 125.68230 * 0.02562 * 24 7 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 1 1.5551 2.4565 -1.2125 5 1 1.5551 2.4564 1.2125 6 1 3.5351 1.7563 0.0006 7 6 1.9314 -0.7104 -1.2305 8 6 2.7130 -0.1635 -2.1920 9 6 2.9563 -1.1456 -3.1572 10 6 2.3021 -2.2877 -2.7468 11 6 2.2781 -3.5739 -3.4516 12 8 2.8760 -3.7024 -4.5037 13 7 1.5941 -4.6134 -2.9339 14 6 1.5706 -5.8981 -3.6376 15 6 1.3063 -7.0104 -2.6272 16 6 1.7317 -8.3628 -3.2379 17 14 0.7916 -8.5668 -4.8205 18 6 -0.9504 -9.1927 -4.5059 19 6 -1.0545 -10.2233 -5.6778 20 6 0.2846 -10.9613 -5.8423 21 6 1.4829 -9.9673 -5.8566 22 6 0.7764 -6.9659 -5.7564 23 6 0.5080 -5.8434 -4.7314 24 7 1.6692 -1.9990 -1.5590 25 1 -0.3932 0.4418 -0.7650 26 1 1.7923 -0.5139 0.8899 27 1 3.0821 0.8514 -2.2104 28 1 3.5456 -1.0310 -4.0550 29 1 1.1173 -4.5108 -2.0954 30 1 2.5435 -6.0649 -4.1001 31 1 0.2437 -7.0382 -2.3857 32 1 1.8818 -6.8233 -1.7205 33 1 2.8029 -8.3589 -3.4397 34 1 1.4859 -9.1739 -2.5524 35 1 -1.0297 -9.6823 -3.5353 36 1 -1.6861 -8.3951 -4.6089 37 1 -1.2948 -9.6979 -6.6021 38 1 -1.8412 -10.9447 -5.4571 39 1 0.2720 -11.5185 -6.7790 40 1 0.4107 -11.6602 -5.0154 41 1 1.7050 -9.6339 -6.8703 42 1 2.3638 -10.4057 -5.3877 43 1 -0.0150 -6.9815 -6.5060 44 1 1.7410 -6.8064 -6.2381 45 1 -0.4780 -5.9829 -4.2883 46 1 0.5497 -4.8759 -5.2315 47 1 1.1277 -2.6157 -1.0420 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15739290_6580494.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:24:59 Heat of formation + Delta-G solvation = -81.987154 kcal Electronic energy + Delta-G solvation = -25099.822587 eV Core-core repulsion = 21598.442294 eV Total energy + Delta-G solvation = -3501.380293 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 322.163 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.51073 -40.51903 -37.96881 -37.65374 -36.22157 -34.10983 -32.19628 -32.11372 -31.33246 -29.78397 -27.69514 -26.19679 -24.79969 -23.73956 -23.09544 -21.89041 -21.46295 -21.06190 -20.90357 -19.76254 -18.20418 -17.30218 -16.74020 -16.55083 -16.23261 -16.06485 -15.83425 -15.64470 -15.40802 -15.16589 -15.07272 -14.74923 -14.43117 -14.28213 -14.07277 -13.82254 -13.70218 -13.47791 -13.29051 -13.17886 -12.91119 -12.48218 -12.39845 -12.29682 -12.21320 -12.18385 -12.02823 -11.92608 -11.83462 -11.42486 -11.12607 -10.76433 -10.46066 -10.41464 -10.28723 -10.11300 -10.06566 -9.24476 0.38371 0.96784 1.41829 1.46351 1.59427 1.64734 1.74313 1.80258 1.81051 2.03799 2.13975 2.42112 2.55697 3.25960 3.53146 3.61001 3.81493 3.97961 4.03452 4.08239 4.09649 4.23142 4.23747 4.27017 4.34612 4.37208 4.41748 4.53064 4.58046 4.61757 4.68175 4.77603 4.97549 5.00703 5.02323 5.05645 5.07032 5.12395 5.13511 5.21018 5.24265 5.30462 5.35298 5.42794 5.46049 5.49395 5.60713 5.83041 6.22260 6.32140 6.46142 7.16554 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.068 4.068 3 Si 0.977 3.023 4 H -0.247 1.247 5 H -0.253 1.253 6 H -0.247 1.247 7 C 0.021 3.979 8 C -0.207 4.207 9 C -0.098 4.098 10 C -0.051 4.051 11 C 0.590 3.410 12 O -0.522 6.522 13 N -0.730 5.730 14 C 0.135 3.865 15 C -0.117 4.117 16 C -0.406 4.406 17 Si 0.989 3.011 18 C -0.404 4.404 19 C -0.122 4.122 20 C -0.119 4.119 21 C -0.408 4.408 22 C -0.405 4.405 23 C -0.117 4.117 24 N -0.522 5.522 25 H 0.381 0.619 26 H 0.120 0.880 27 H 0.146 0.854 28 H 0.152 0.848 29 H 0.393 0.607 30 H 0.093 0.907 31 H 0.072 0.928 32 H 0.072 0.928 33 H 0.081 0.919 34 H 0.084 0.916 35 H 0.078 0.922 36 H 0.077 0.923 37 H 0.063 0.937 38 H 0.064 0.936 39 H 0.062 0.938 40 H 0.061 0.939 41 H 0.078 0.922 42 H 0.078 0.922 43 H 0.081 0.919 44 H 0.081 0.919 45 H 0.066 0.934 46 H 0.071 0.929 47 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.024 -0.236 3.195 3.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.178 4.178 3 Si 0.797 3.203 4 H -0.171 1.171 5 H -0.177 1.177 6 H -0.170 1.170 7 C -0.097 4.097 8 C -0.231 4.231 9 C -0.124 4.124 10 C -0.164 4.164 11 C 0.377 3.623 12 O -0.398 6.398 13 N -0.381 5.381 14 C 0.031 3.969 15 C -0.154 4.154 16 C -0.493 4.493 17 Si 1.184 2.816 18 C -0.490 4.490 19 C -0.159 4.159 20 C -0.156 4.156 21 C -0.494 4.494 22 C -0.492 4.492 23 C -0.155 4.155 24 N -0.118 5.118 25 H 0.229 0.771 26 H 0.138 0.862 27 H 0.164 0.836 28 H 0.170 0.830 29 H 0.227 0.773 30 H 0.111 0.889 31 H 0.091 0.909 32 H 0.090 0.910 33 H 0.100 0.900 34 H 0.103 0.897 35 H 0.096 0.904 36 H 0.096 0.904 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.081 0.919 40 H 0.080 0.920 41 H 0.096 0.904 42 H 0.097 0.903 43 H 0.099 0.901 44 H 0.100 0.900 45 H 0.084 0.916 46 H 0.089 0.911 47 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -1.258 0.077 3.047 3.297 hybrid contribution -0.770 -0.614 0.093 0.989 sum -2.028 -0.537 3.140 3.777 Atomic orbital electron populations 1.86508 1.17049 1.81663 1.49531 1.24899 0.85104 1.11554 0.96225 0.85263 0.80746 0.72800 0.81475 1.17059 1.17660 1.16994 1.21098 1.03725 0.85348 0.99528 1.20724 1.05551 1.00693 0.96161 1.21313 1.00475 0.90549 1.00107 1.20495 1.07867 0.96732 0.91316 1.17053 0.78775 0.81994 0.84477 1.90873 1.44240 1.82713 1.21934 1.46060 1.53473 1.12083 1.26453 1.21159 1.01348 0.81634 0.92710 1.21584 1.02180 0.93518 0.98161 1.26147 1.08481 0.98794 1.15841 0.79808 0.67827 0.66868 0.67103 1.26651 1.17955 1.03932 1.00482 1.22026 0.97557 0.98181 0.98159 1.21842 0.93244 0.98439 1.02088 1.26494 1.01232 1.12386 1.09311 1.26178 1.05185 1.12897 1.04951 1.21689 0.98083 1.00065 0.95712 1.41917 1.39788 1.11154 1.18950 0.77123 0.86217 0.83645 0.83001 0.77334 0.88936 0.90927 0.90983 0.90028 0.89714 0.90363 0.90383 0.91822 0.91678 0.91922 0.92025 0.90350 0.90279 0.90068 0.89982 0.91583 0.91077 0.74508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.89 12.88 -35.23 -0.45 0.43 16 2 C -0.07 0.14 3.08 36.01 0.11 0.26 16 3 Si 0.98 -1.92 25.82 -169.99 -4.39 -6.31 16 4 H -0.25 0.37 7.11 56.52 0.40 0.77 16 5 H -0.25 0.15 7.11 56.52 0.40 0.55 16 6 H -0.25 0.28 7.11 56.52 0.40 0.68 16 7 C 0.02 -0.01 6.47 -81.95 -0.53 -0.54 16 8 C -0.21 -0.11 9.32 -39.98 -0.37 -0.48 16 9 C -0.10 -0.20 10.65 -39.12 -0.42 -0.62 16 10 C -0.05 -0.08 7.06 -81.98 -0.58 -0.66 16 11 C 0.59 1.60 7.50 -12.85 -0.10 1.50 16 12 O -0.52 -3.36 16.49 5.20 0.09 -3.28 16 13 N -0.73 0.31 5.03 -55.52 -0.28 0.03 16 14 C 0.14 -0.04 1.96 -68.35 -0.13 -0.18 16 15 C -0.12 0.25 5.11 -26.23 -0.13 0.12 16 16 C -0.41 0.87 4.95 37.87 0.19 1.06 16 17 Si 0.99 -2.23 10.59 -169.99 -1.80 -4.03 16 18 C -0.40 0.56 5.95 38.98 0.23 0.80 16 19 C -0.12 0.06 5.97 -24.50 -0.15 -0.08 16 20 C -0.12 0.04 6.10 -24.89 -0.15 -0.11 16 21 C -0.41 0.35 5.84 38.59 0.23 0.57 16 22 C -0.41 0.28 4.96 37.87 0.19 0.46 16 23 C -0.12 0.01 5.24 -26.22 -0.14 -0.13 16 24 N -0.52 0.48 5.99 -5.69 -0.03 0.44 16 25 H 0.38 -1.67 8.70 45.56 0.40 -1.27 16 26 H 0.12 -0.38 7.96 -51.93 -0.41 -0.79 16 27 H 0.15 -0.14 6.17 -52.48 -0.32 -0.46 16 28 H 0.15 0.29 8.06 -52.49 -0.42 -0.13 16 29 H 0.39 -1.26 7.71 -40.82 -0.31 -1.58 16 30 H 0.09 0.14 7.28 -51.93 -0.38 -0.24 16 31 H 0.07 -0.24 7.76 -51.93 -0.40 -0.64 16 32 H 0.07 -0.16 8.13 -51.93 -0.42 -0.58 16 33 H 0.08 -0.15 7.97 -51.93 -0.41 -0.56 16 34 H 0.08 -0.21 7.97 -51.93 -0.41 -0.63 16 35 H 0.08 -0.12 8.04 -51.93 -0.42 -0.54 16 36 H 0.08 -0.12 8.04 -51.93 -0.42 -0.54 16 37 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.06 -0.01 8.14 -51.92 -0.42 -0.43 16 40 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.08 -0.05 8.03 -51.93 -0.42 -0.47 16 42 H 0.08 -0.08 8.03 -51.93 -0.42 -0.50 16 43 H 0.08 -0.07 7.97 -51.93 -0.41 -0.48 16 44 H 0.08 0.01 7.97 -51.93 -0.41 -0.40 16 45 H 0.07 -0.10 7.76 -51.93 -0.40 -0.50 16 46 H 0.07 0.15 7.82 -51.93 -0.41 -0.25 16 47 H 0.42 -1.42 8.19 -40.82 -0.33 -1.76 16 LS Contribution 370.44 15.07 5.58 5.58 Total: 0.00 -7.03 370.44 -10.28 -17.31 By element: Atomic # 1 Polarization: -4.90 SS G_CDS: -7.24 Total: -12.13 kcal Atomic # 6 Polarization: 3.72 SS G_CDS: -1.75 Total: 1.96 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: -0.31 Total: 0.47 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -0.37 Total: -2.84 kcal Atomic # 14 Polarization: -4.16 SS G_CDS: -6.19 Total: -10.35 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.03 -10.28 -17.31 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15739290_6580494.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.676 kcal (2) G-P(sol) polarization free energy of solvation -7.029 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.311 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds