Wall clock time and date at job start Thu Mar 4 2021 19:05:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50702 * 109.47242 * 120.00115 * 2 1 3 5 5 C 1.34452 * 126.48097 * 254.69218 * 4 2 1 6 6 N 1.36570 * 109.98589 * 179.82616 * 5 4 2 7 7 C 1.37827 * 109.85881 * 0.44857 * 6 5 4 8 8 C 1.38644 * 133.38311 * 179.71334 * 7 6 5 9 9 C 1.39327 * 119.66708 * 180.02562 * 8 7 6 10 10 C 1.47571 * 119.83233 * 179.97438 * 9 8 7 11 11 O 1.21591 * 119.99917 * 0.02562 * 10 9 8 12 12 N 1.34774 * 120.00201 * 180.02562 * 10 9 8 13 13 C 1.46504 * 120.00031 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.84975 * 25.33274 * 13 12 10 15 15 C 1.53780 * 113.61225 * 156.53094 * 13 12 10 16 16 C 1.53783 * 87.08215 * 89.11519 * 15 13 12 17 17 H 1.08996 * 113.61269 * 270.88263 * 16 15 13 18 18 C 1.53000 * 113.61105 * 140.06428 * 16 15 13 19 19 F 1.39899 * 109.47544 * 60.00186 * 18 16 15 20 20 F 1.39901 * 109.46672 * 180.02562 * 18 16 15 21 21 F 1.39896 * 109.47058 * 299.99905 * 18 16 15 22 22 C 1.53784 * 113.61272 * 254.13704 * 13 12 10 23 23 C 1.40206 * 120.33471 * 359.97438 * 9 8 7 24 24 C 1.36230 * 120.37932 * 0.02562 * 23 9 8 25 25 C 1.39875 * 119.96051 * 359.97438 * 24 23 9 26 26 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 27 27 H 1.09000 * 109.47224 * 239.99764 * 2 1 3 28 28 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 29 29 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 30 30 H 1.08005 * 125.01164 * 359.97438 * 5 4 2 31 31 H 0.96995 * 125.07429 * 180.17946 * 6 5 4 32 32 H 1.07998 * 120.16733 * 359.97438 * 8 7 6 33 33 H 0.97000 * 119.99884 * 359.97438 * 12 10 9 34 34 H 1.08995 * 113.61485 * 203.66643 * 15 13 12 35 35 H 1.09005 * 113.61227 * 334.48458 * 15 13 12 36 36 H 1.08994 * 113.61623 * 25.43411 * 22 13 12 37 37 H 1.09003 * 113.60860 * 156.34106 * 22 13 12 38 38 H 1.07998 * 119.80972 * 179.97438 * 23 9 8 39 39 H 1.07996 * 120.02041 * 180.02562 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4669 -0.1367 2.3221 6 7 2.8033 -1.0947 3.2354 7 6 2.4946 -2.3432 2.7397 8 6 2.6314 -3.6280 3.2425 9 6 2.2139 -4.7156 2.4784 10 6 2.3583 -6.0848 3.0098 11 8 2.8401 -6.2614 4.1121 12 7 1.9561 -7.1394 2.2733 13 6 2.1000 -8.4986 2.8006 14 1 2.1145 -8.5306 3.8900 15 6 1.1308 -9.5108 2.1673 16 6 2.2085 -9.7545 1.0977 17 1 2.1311 -9.0866 0.2398 18 6 2.3517 -11.2238 0.6957 19 9 1.1372 -11.6861 0.1776 20 9 3.3505 -11.3460 -0.2762 21 9 2.6988 -11.9827 1.8185 22 6 3.2403 -9.2960 2.1457 23 6 1.6574 -4.5159 1.2071 24 6 1.5194 -3.2569 0.7055 25 6 1.9338 -2.1548 1.4606 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2243 29 1 1.5615 2.4679 1.2085 30 1 2.6079 0.9255 2.4579 31 1 3.2037 -0.9226 4.1020 32 1 3.0601 -3.7850 4.2213 33 1 1.5714 -6.9984 1.3940 34 1 0.9349 -10.3796 2.7956 35 1 0.2201 -9.0573 1.7761 36 1 4.0321 -8.6690 1.7357 37 1 3.6200 -10.1062 2.7681 38 1 1.3370 -5.3652 0.6218 39 1 1.0896 -3.1097 -0.2743 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_12335838.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:05:20 Heat of formation + Delta-G solvation = -127.085303 kcal Electronic energy + Delta-G solvation = -28707.385504 eV Core-core repulsion = 23974.979741 eV Total energy + Delta-G solvation = -4732.405763 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.103 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.08365 -48.60644 -48.57442 -42.45187 -41.35511 -39.53872 -37.88023 -37.50883 -34.59104 -33.35012 -30.82354 -30.69747 -28.85223 -26.93698 -26.45552 -25.14401 -23.79097 -23.63073 -21.72130 -20.81657 -20.57089 -19.55838 -19.35083 -19.23910 -18.64766 -18.42997 -18.11559 -17.35944 -17.03576 -16.21629 -16.15408 -15.84108 -15.53610 -15.48236 -15.38427 -15.06256 -15.01947 -14.99264 -14.78293 -14.77641 -14.74837 -14.70531 -14.52899 -14.15419 -13.84016 -13.65535 -13.56731 -13.15370 -12.65812 -12.58626 -12.31251 -12.17832 -11.89725 -11.85986 -11.61333 -11.15953 -10.76484 -10.32360 -10.23937 -9.35733 -8.79058 -4.84489 -0.32073 0.38951 1.35770 1.40043 1.66184 1.79047 1.85236 1.87570 2.02054 2.21257 2.73537 2.81954 2.87038 2.98862 3.40615 3.54911 3.57032 3.62939 3.71605 3.72867 3.83024 3.97526 4.05560 4.11695 4.30211 4.38549 4.44515 4.51959 4.58617 4.59682 4.67834 4.76138 4.81168 4.87061 4.93417 4.99023 5.22114 5.41496 5.43130 5.53373 5.62331 5.98950 6.42627 6.52430 6.71405 7.11183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.049 4.049 3 Si 0.768 3.232 4 C -0.190 4.190 5 C 0.087 3.913 6 N -0.578 5.578 7 C 0.067 3.933 8 C -0.066 4.066 9 C -0.136 4.136 10 C 0.568 3.432 11 O -0.577 6.577 12 N -0.695 5.695 13 C 0.123 3.877 14 H 0.099 0.901 15 C -0.122 4.122 16 C -0.158 4.158 17 H 0.156 0.844 18 C 0.455 3.545 19 F -0.189 7.189 20 F -0.193 7.193 21 F -0.189 7.189 22 C -0.140 4.140 23 C -0.106 4.106 24 C -0.082 4.082 25 C -0.082 4.082 26 H 0.391 0.609 27 H 0.085 0.915 28 H -0.291 1.291 29 H -0.288 1.288 30 H 0.202 0.798 31 H 0.434 0.566 32 H 0.129 0.871 33 H 0.417 0.583 34 H 0.110 0.890 35 H 0.110 0.890 36 H 0.088 0.912 37 H 0.105 0.895 38 H 0.157 0.843 39 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.698 4.646 -3.619 5.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.158 4.158 3 Si 0.672 3.328 4 C -0.197 4.197 5 C -0.042 4.042 6 N -0.181 5.181 7 C -0.040 4.040 8 C -0.087 4.087 9 C -0.140 4.140 10 C 0.357 3.643 11 O -0.458 6.458 12 N -0.347 5.347 13 C 0.017 3.983 14 H 0.117 0.883 15 C -0.160 4.160 16 C -0.177 4.177 17 H 0.174 0.826 18 C 0.401 3.599 19 F -0.170 7.170 20 F -0.175 7.175 21 F -0.170 7.170 22 C -0.178 4.178 23 C -0.125 4.125 24 C -0.101 4.101 25 C -0.087 4.087 26 H 0.241 0.759 27 H 0.103 0.897 28 H -0.218 1.218 29 H -0.215 1.215 30 H 0.219 0.781 31 H 0.275 0.725 32 H 0.147 0.853 33 H 0.256 0.744 34 H 0.128 0.872 35 H 0.128 0.872 36 H 0.106 0.894 37 H 0.123 0.877 38 H 0.174 0.826 39 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.976 5.015 -2.180 5.555 hybrid contribution -1.039 -0.420 -0.480 1.219 sum -0.063 4.596 -2.660 5.310 Atomic orbital electron populations 1.86590 1.19223 1.80583 1.50740 1.24291 0.83332 1.11180 0.97015 0.94229 0.90052 0.71526 0.76970 1.19798 1.10518 0.91211 0.98172 1.22192 0.98364 0.95433 0.88214 1.41771 1.54412 1.03388 1.18529 1.18148 1.03956 0.86806 0.95113 1.20140 0.99811 0.88684 1.00104 1.19430 1.06229 0.91591 0.96771 1.18315 0.76671 0.85259 0.84053 1.90782 1.46252 1.86734 1.22028 1.45429 1.63465 1.04537 1.21317 1.21695 0.96252 0.80671 0.99641 0.88298 1.23345 0.97309 0.99743 0.95589 1.24260 1.02093 0.89366 1.02020 0.82643 1.20780 0.73128 0.91760 0.74208 1.93186 1.45452 1.90983 1.87403 1.93182 1.62573 1.96966 1.64735 1.93155 1.92157 1.79204 1.52533 1.23569 0.97080 1.00746 0.96427 1.20922 0.99461 0.98132 0.94000 1.20416 0.98878 0.90546 1.00231 1.19575 1.01021 0.94065 0.94019 0.75917 0.89723 1.21811 1.21453 0.78122 0.72535 0.85268 0.74406 0.87150 0.87201 0.89378 0.87686 0.82577 0.83992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.79 12.86 -148.98 -1.92 -2.71 16 2 C -0.05 0.09 3.05 71.24 0.22 0.31 16 3 Si 0.77 -3.68 30.78 68.60 2.11 -1.57 16 4 C -0.19 -0.24 5.61 -18.64 -0.10 -0.34 16 5 C 0.09 -0.20 10.43 83.09 0.87 0.67 16 6 N -0.58 0.99 6.07 -187.70 -1.14 -0.15 16 7 C 0.07 0.23 7.26 38.96 0.28 0.51 16 8 C -0.07 -0.31 9.61 22.63 0.22 -0.09 16 9 C -0.14 -0.41 5.87 -20.07 -0.12 -0.53 16 10 C 0.57 2.56 7.76 86.71 0.67 3.23 16 11 O -0.58 -7.37 15.93 -4.00 -0.06 -7.44 16 12 N -0.70 2.18 5.21 -443.16 -2.31 -0.13 16 13 C 0.12 -0.38 4.30 45.52 0.20 -0.19 16 14 H 0.10 0.11 7.50 -2.39 -0.02 0.09 16 15 C -0.12 0.86 7.17 31.12 0.22 1.09 16 16 C -0.16 0.96 3.69 -10.17 -0.04 0.92 16 17 H 0.16 -1.66 8.14 -2.39 -0.02 -1.68 16 18 C 0.46 -0.11 3.02 71.98 0.22 0.10 16 19 F -0.19 -0.33 17.18 44.97 0.77 0.44 16 20 F -0.19 -0.56 17.32 44.97 0.78 0.22 16 21 F -0.19 -0.43 15.77 44.97 0.71 0.28 16 22 C -0.14 0.53 7.34 31.21 0.23 0.76 16 23 C -0.11 0.17 9.46 22.28 0.21 0.38 16 24 C -0.08 -0.06 10.03 22.20 0.22 0.17 16 25 C -0.08 -0.30 6.35 -20.14 -0.13 -0.43 16 26 H 0.39 -2.57 8.74 -74.06 -0.65 -3.22 16 27 H 0.08 -0.41 7.96 -2.39 -0.02 -0.42 16 28 H -0.29 -0.09 7.11 99.48 0.71 0.61 16 29 H -0.29 -0.18 7.05 99.48 0.70 0.53 16 30 H 0.20 -1.68 6.30 -2.91 -0.02 -1.70 16 31 H 0.43 -3.22 8.96 -92.71 -0.83 -4.05 16 32 H 0.13 0.67 7.62 -2.91 -0.02 0.65 16 33 H 0.42 -3.93 6.69 -92.71 -0.62 -4.55 16 34 H 0.11 -0.73 7.88 -2.39 -0.02 -0.75 16 35 H 0.11 -1.11 8.14 -2.38 -0.02 -1.12 16 36 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 37 H 0.10 -0.30 7.15 -2.39 -0.02 -0.32 16 38 H 0.16 -1.43 6.36 -2.91 -0.02 -1.45 16 39 H 0.14 -0.38 8.06 -2.91 -0.02 -0.40 16 Total: 0.00 -23.79 343.86 1.21 -22.58 By element: Atomic # 1 Polarization: -17.19 SS G_CDS: -0.90 Total: -18.09 kcal Atomic # 6 Polarization: 3.38 SS G_CDS: 3.17 Total: 6.55 kcal Atomic # 7 Polarization: 3.18 SS G_CDS: -3.45 Total: -0.27 kcal Atomic # 8 Polarization: -8.16 SS G_CDS: -1.98 Total: -10.14 kcal Atomic # 9 Polarization: -1.32 SS G_CDS: 2.26 Total: 0.94 kcal Atomic # 14 Polarization: -3.68 SS G_CDS: 2.11 Total: -1.57 kcal Total: -23.79 1.21 -22.58 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_12335838.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.500 kcal (2) G-P(sol) polarization free energy of solvation -23.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds