Wall clock time and date at job start Thu Mar 4 2021 19:05:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.34855 * 125.89904 * 2 1 4 4 C 1.40943 * 107.46553 * 180.23118 * 3 2 1 5 5 C 1.50707 * 126.26384 * 179.79237 * 4 3 2 6 6 O 1.42901 * 109.47107 * 104.95654 * 5 4 3 7 7 Si 1.86292 * 109.47200 * 344.95148 * 5 4 3 8 8 C 1.34850 * 107.46696 * 359.75019 * 4 3 2 9 9 C 1.50701 * 125.89751 * 180.02562 * 8 4 3 10 10 N 1.36564 * 125.90016 * 179.80483 * 2 1 3 11 11 C 1.40219 * 125.67049 * 0.02814 * 10 2 1 12 12 C 1.38549 * 119.99685 * 294.69622 * 11 10 2 13 13 C 1.39504 * 119.78679 * 180.25192 * 12 11 10 14 14 C 1.47855 * 120.11359 * 179.74692 * 13 12 11 15 15 O 1.21547 * 120.00037 * 359.97438 * 14 13 12 16 16 N 1.34780 * 119.99952 * 179.97438 * 14 13 12 17 17 C 1.46496 * 119.99924 * 179.97438 * 16 14 13 18 18 H 1.08999 * 112.85250 * 336.19546 * 17 16 14 19 19 C 1.53781 * 113.61379 * 107.50162 * 17 16 14 20 20 C 1.53781 * 87.08018 * 89.11754 * 19 17 16 21 21 H 1.09003 * 113.60962 * 270.88239 * 20 19 17 22 22 C 1.53003 * 113.69099 * 139.99485 * 20 19 17 23 23 F 1.39898 * 109.46654 * 322.46132 * 22 20 19 24 24 F 1.39903 * 109.47031 * 82.45974 * 22 20 19 25 25 F 1.39893 * 109.46902 * 202.46179 * 22 20 19 26 26 C 1.53779 * 87.08326 * 25.43125 * 20 19 17 27 27 C 1.39580 * 119.76988 * 359.46963 * 13 12 11 28 28 C 1.38018 * 119.98910 * 0.50406 * 27 13 12 29 29 C 1.38227 * 120.21178 * 359.77116 * 28 27 13 30 30 H 1.08998 * 109.47367 * 270.19513 * 1 2 3 31 31 H 1.08997 * 109.46875 * 30.19244 * 1 2 3 32 32 H 1.09000 * 109.46838 * 150.19085 * 1 2 3 33 33 H 1.08004 * 126.26901 * 359.95644 * 3 2 1 34 34 H 1.09003 * 109.46751 * 224.95216 * 5 4 3 35 35 H 0.96702 * 113.99499 * 180.02562 * 6 5 4 36 36 H 1.48500 * 110.00194 * 298.68521 * 7 5 4 37 37 H 1.48497 * 110.00180 * 60.00367 * 7 5 4 38 38 H 1.09000 * 109.47399 * 269.98012 * 9 8 4 39 39 H 1.09001 * 109.47243 * 29.97941 * 9 8 4 40 40 H 1.08999 * 109.47268 * 149.97215 * 9 8 4 41 41 H 1.08002 * 120.10283 * 359.96671 * 12 11 10 42 42 H 0.96996 * 119.99913 * 359.97438 * 16 14 13 43 43 H 1.09000 * 113.61693 * 203.66470 * 19 17 16 44 44 H 1.09003 * 113.61373 * 334.56496 * 19 17 16 45 45 H 1.08994 * 113.61566 * 220.02134 * 26 20 19 46 46 H 1.09005 * 113.68683 * 89.12754 * 26 20 19 47 47 H 1.08004 * 120.00319 * 180.28136 * 27 13 12 48 48 H 1.07997 * 119.89436 * 179.79184 * 28 27 13 49 49 H 1.07998 * 119.88157 * 179.97438 * 29 28 27 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2977 1.0924 0.0000 4 6 3.6348 0.6467 -0.0054 5 6 4.8648 1.5177 -0.0118 6 8 5.4602 1.5106 1.2873 7 14 4.3893 3.2603 -0.4676 8 6 3.6121 -0.7016 -0.0029 9 6 4.8178 -1.6056 -0.0064 10 7 2.3078 -1.1062 0.0038 11 6 1.8645 -2.4365 0.0077 12 6 1.1695 -2.9318 1.0992 13 6 0.7351 -4.2574 1.1007 14 6 -0.0024 -4.7951 2.2640 15 8 -0.2307 -4.0818 3.2214 16 7 -0.4214 -6.0760 2.2628 17 6 -1.1516 -6.6089 3.4157 18 1 -0.9468 -6.0620 4.3361 19 6 -2.6499 -6.8286 3.1479 20 6 -2.2762 -8.2400 2.6649 21 1 -2.0404 -8.2894 1.6018 22 6 -3.2641 -9.3222 3.1053 23 9 -3.7122 -9.0449 4.4012 24 9 -4.3546 -9.3425 2.2291 25 9 -2.6287 -10.5684 3.0881 26 6 -1.0352 -8.1348 3.5669 27 6 0.9939 -5.0728 -0.0022 28 6 1.6866 -4.5696 -1.0847 29 6 2.1218 -3.2577 -1.0832 30 1 -0.3634 0.0035 1.0276 31 1 -0.3633 0.8882 -0.5168 32 1 -0.3633 -0.8917 -0.5109 33 1 1.9670 2.1205 -0.0007 34 1 5.5783 1.1333 -0.7406 35 1 6.2584 2.0520 1.3569 36 1 3.7980 3.2857 -1.8295 37 1 3.4167 3.7959 0.5185 38 1 5.1040 -1.8258 -1.0349 39 1 5.6447 -1.1105 0.5028 40 1 4.5769 -2.5345 0.5105 41 1 0.9687 -2.2948 1.9480 42 1 -0.2396 -6.6451 1.4987 43 1 -3.2602 -6.8236 4.0510 44 1 -3.0512 -6.1898 2.3612 45 1 -0.1329 -8.5504 3.1184 46 1 -1.2026 -8.4867 4.5849 47 1 0.6554 -6.0984 -0.0069 48 1 1.8890 -5.2029 -1.9358 49 1 2.6637 -2.8695 -1.9329 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_12335854.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:05:28 Heat of formation + Delta-G solvation = -109.213278 kcal Electronic energy + Delta-G solvation = -36568.155748 eV Core-core repulsion = 31241.685977 eV Total energy + Delta-G solvation = -5326.469771 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.150 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -51.10991 -48.63606 -48.59855 -43.02599 -41.67775 -40.18479 -39.05413 -37.64207 -35.09717 -34.17369 -33.84775 -32.38256 -30.63783 -30.26394 -28.99910 -27.30474 -26.98373 -25.60743 -24.85860 -23.92840 -23.68534 -22.18036 -21.22334 -20.88913 -20.24380 -19.46896 -19.37306 -18.83060 -18.58138 -18.28322 -17.55022 -17.43523 -17.23655 -16.69130 -16.26253 -16.04474 -15.80642 -15.53131 -15.46786 -15.41703 -15.20592 -15.13131 -15.04648 -14.92696 -14.79469 -14.77925 -14.75296 -14.32608 -14.26750 -14.23889 -13.93455 -13.83675 -13.68959 -13.62121 -13.54069 -13.29265 -13.21243 -12.98954 -12.72508 -12.53345 -12.40995 -12.35408 -11.95271 -11.94397 -11.67153 -11.31740 -10.56512 -10.41717 -10.19008 -10.15576 -9.65815 -8.99141 -4.94677 -0.49785 -0.11340 0.94251 1.38365 1.52103 1.56067 1.59552 1.72944 1.76935 1.88286 2.09721 2.51218 2.70605 2.78633 2.95608 3.36550 3.37821 3.54103 3.55787 3.62651 3.68109 3.71370 3.83363 3.87215 3.88551 3.93776 4.06625 4.10958 4.17311 4.27456 4.37664 4.40372 4.45326 4.48933 4.54412 4.55574 4.60141 4.65035 4.65943 4.70622 4.82262 4.83448 4.86402 4.92082 4.98006 4.98440 5.08682 5.09663 5.18002 5.33402 5.49708 5.78134 5.97067 6.29477 6.34705 6.98016 7.01879 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 C 0.018 3.982 3 C -0.219 4.219 4 C -0.181 4.181 5 C -0.038 4.038 6 O -0.568 6.568 7 Si 0.785 3.215 8 C 0.046 3.954 9 C -0.080 4.080 10 N -0.404 5.404 11 C 0.093 3.907 12 C -0.066 4.066 13 C -0.132 4.132 14 C 0.563 3.437 15 O -0.575 6.575 16 N -0.690 5.690 17 C 0.122 3.878 18 H 0.097 0.903 19 C -0.141 4.141 20 C -0.157 4.157 21 H 0.160 0.840 22 C 0.454 3.546 23 F -0.190 7.190 24 F -0.193 7.193 25 F -0.188 7.188 26 C -0.121 4.121 27 C -0.060 4.060 28 C -0.098 4.098 29 C -0.081 4.081 30 H 0.071 0.929 31 H 0.091 0.909 32 H 0.070 0.930 33 H 0.129 0.871 34 H 0.087 0.913 35 H 0.399 0.601 36 H -0.298 1.298 37 H -0.308 1.308 38 H 0.092 0.908 39 H 0.089 0.911 40 H 0.064 0.936 41 H 0.112 0.888 42 H 0.420 0.580 43 H 0.103 0.897 44 H 0.089 0.911 45 H 0.113 0.887 46 H 0.109 0.891 47 H 0.175 0.825 48 H 0.179 0.821 49 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.149 -4.541 -6.574 9.506 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.091 4.091 3 C -0.243 4.243 4 C -0.187 4.187 5 C -0.149 4.149 6 O -0.377 6.377 7 Si 0.693 3.307 8 C -0.063 4.063 9 C -0.138 4.138 10 N -0.079 5.079 11 C 0.004 3.996 12 C -0.086 4.086 13 C -0.136 4.136 14 C 0.352 3.648 15 O -0.455 6.455 16 N -0.343 5.343 17 C 0.016 3.984 18 H 0.115 0.885 19 C -0.180 4.180 20 C -0.176 4.176 21 H 0.178 0.822 22 C 0.400 3.600 23 F -0.172 7.172 24 F -0.175 7.175 25 F -0.170 7.170 26 C -0.159 4.159 27 C -0.079 4.079 28 C -0.116 4.116 29 C -0.100 4.100 30 H 0.090 0.910 31 H 0.110 0.890 32 H 0.089 0.911 33 H 0.146 0.854 34 H 0.105 0.895 35 H 0.249 0.751 36 H -0.225 1.225 37 H -0.237 1.237 38 H 0.110 0.890 39 H 0.107 0.893 40 H 0.083 0.917 41 H 0.130 0.870 42 H 0.259 0.741 43 H 0.121 0.879 44 H 0.107 0.893 45 H 0.132 0.868 46 H 0.127 0.873 47 H 0.192 0.808 48 H 0.196 0.804 49 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges 3.721 -4.257 -5.972 8.223 hybrid contribution -0.869 -0.401 0.193 0.976 sum 2.852 -4.658 -5.779 7.952 Atomic orbital electron populations 1.20362 0.86536 1.04003 1.03013 1.20695 0.94512 0.85034 1.08885 1.20666 0.93291 0.97493 1.12843 1.18993 0.93930 0.92714 1.13083 1.24075 0.93958 1.08347 0.88500 1.86483 1.47078 1.74242 1.29910 0.94970 0.84652 0.76169 0.74929 1.20727 0.84749 0.94113 1.06759 1.20405 0.92486 0.97088 1.03792 1.41509 1.05581 1.03420 1.57379 1.17697 1.02445 0.83345 0.96132 1.21103 0.95830 0.95259 0.96411 1.19685 1.03496 0.94172 0.96213 1.18386 0.78084 0.82178 0.86195 1.90818 1.58212 1.59299 1.37186 1.45369 1.56614 1.11237 1.21040 1.21712 0.91423 0.95194 0.90074 0.88468 1.23527 0.97490 0.93470 1.03494 1.24222 0.95565 0.92493 1.05279 0.82249 1.20805 0.81404 0.83121 0.74645 1.93158 1.90463 1.93513 1.40028 1.93185 1.58116 1.96718 1.69449 1.93187 1.81716 1.45829 1.96241 1.23353 0.97317 0.93920 1.01327 1.21839 0.94625 1.00654 0.90745 1.21485 0.96271 0.94101 0.99709 1.21677 0.97885 0.94560 0.95926 0.91029 0.89040 0.91064 0.85359 0.89486 0.75077 1.22543 1.23704 0.88979 0.89268 0.91696 0.87029 0.74092 0.87857 0.89277 0.86849 0.87285 0.80805 0.80357 0.83793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.40 9.94 71.24 0.71 0.31 16 2 C 0.02 0.17 6.81 41.05 0.28 0.45 16 3 C -0.22 -2.68 9.27 22.16 0.21 -2.47 16 4 C -0.18 -1.85 5.39 -19.98 -0.11 -1.96 16 5 C -0.04 -0.15 2.49 71.24 0.18 0.03 16 6 O -0.57 -2.17 12.86 -148.98 -1.92 -4.09 16 7 Si 0.79 2.06 30.84 68.60 2.12 4.17 16 8 C 0.05 0.37 6.81 41.04 0.28 0.65 16 9 C -0.08 -0.11 9.72 71.24 0.69 0.58 16 10 N -0.40 -3.21 2.79 -320.37 -0.89 -4.10 16 11 C 0.09 0.31 4.65 38.04 0.18 0.48 16 12 C -0.07 -0.32 9.28 22.65 0.21 -0.11 16 13 C -0.13 0.09 5.87 -20.10 -0.12 -0.03 16 14 C 0.56 1.21 7.77 86.79 0.67 1.88 16 15 O -0.58 -7.13 15.94 -3.86 -0.06 -7.19 16 16 N -0.69 4.36 5.21 -442.90 -2.31 2.05 16 17 C 0.12 -0.61 4.32 45.52 0.20 -0.41 16 18 H 0.10 0.00 7.46 -2.39 -0.02 -0.01 16 19 C -0.14 0.77 7.32 31.12 0.23 1.00 16 20 C -0.16 1.28 3.68 -10.27 -0.04 1.25 16 21 H 0.16 -2.18 8.14 -2.39 -0.02 -2.20 16 22 C 0.45 -0.78 3.02 71.98 0.22 -0.56 16 23 F -0.19 -0.25 15.77 44.97 0.71 0.46 16 24 F -0.19 -0.30 17.32 44.97 0.78 0.48 16 25 F -0.19 -0.05 17.18 44.97 0.77 0.72 16 26 C -0.12 1.11 7.18 31.12 0.22 1.33 16 27 C -0.06 0.55 9.54 22.54 0.21 0.77 16 28 C -0.10 0.91 10.02 22.21 0.22 1.14 16 29 C -0.08 0.27 9.72 22.44 0.22 0.49 16 30 H 0.07 0.38 8.14 -2.39 -0.02 0.36 16 31 H 0.09 0.23 8.14 -2.39 -0.02 0.21 16 32 H 0.07 0.23 7.83 -2.39 -0.02 0.21 16 33 H 0.13 1.58 6.55 -2.91 -0.02 1.56 16 34 H 0.09 -0.10 7.96 -2.39 -0.02 -0.12 16 35 H 0.40 -2.94 8.74 -74.06 -0.65 -3.59 16 36 H -0.30 -2.56 7.11 99.48 0.71 -1.86 16 37 H -0.31 -3.47 7.06 99.48 0.70 -2.77 16 38 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 39 H 0.09 0.13 7.87 -2.39 -0.02 0.12 16 40 H 0.06 0.08 7.83 -2.39 -0.02 0.06 16 41 H 0.11 1.20 7.65 -2.91 -0.02 1.18 16 42 H 0.42 -5.92 6.73 -92.71 -0.62 -6.54 16 43 H 0.10 -0.39 7.14 -2.39 -0.02 -0.41 16 44 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 45 H 0.11 -1.45 8.14 -2.39 -0.02 -1.47 16 46 H 0.11 -0.88 7.89 -2.38 -0.02 -0.90 16 47 H 0.17 -3.07 6.40 -2.91 -0.02 -3.09 16 48 H 0.18 -2.88 8.06 -2.91 -0.02 -2.90 16 49 H 0.14 -0.73 8.06 -2.91 -0.02 -0.75 16 Total: 0.00 -30.01 419.90 3.64 -26.36 By element: Atomic # 1 Polarization: -23.46 SS G_CDS: -0.21 Total: -23.68 kcal Atomic # 6 Polarization: 0.15 SS G_CDS: 4.66 Total: 4.81 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -3.20 Total: -2.05 kcal Atomic # 8 Polarization: -9.30 SS G_CDS: -1.98 Total: -11.28 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 2.26 Total: 1.66 kcal Atomic # 14 Polarization: 2.06 SS G_CDS: 2.12 Total: 4.17 kcal Total: -30.01 3.64 -26.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_12335854.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.849 kcal (2) G-P(sol) polarization free energy of solvation -30.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.856 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.364 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.213 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds