Wall clock time and date at job start Thu Mar 4 2021 19:05:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35656 * 116.99527 * 2 1 4 4 C 1.40143 * 120.14788 * 179.97438 * 3 2 1 5 5 C 1.47536 * 120.19274 * 0.05428 * 4 3 2 6 6 O 1.21591 * 119.99593 * 359.97058 * 5 4 3 7 7 N 1.34773 * 120.00250 * 179.97438 * 5 4 3 8 8 C 1.46493 * 120.00049 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.85390 * 23.79735 * 8 7 5 10 10 C 1.53783 * 113.61556 * 154.99892 * 8 7 5 11 11 C 1.53776 * 87.08448 * 89.11377 * 10 8 7 12 12 H 1.08996 * 113.61507 * 270.88473 * 11 10 8 13 13 C 1.53001 * 113.61554 * 140.06508 * 11 10 8 14 14 F 1.39895 * 109.46837 * 60.00337 * 13 11 10 15 15 F 1.39905 * 109.46937 * 180.02562 * 13 11 10 16 16 F 1.39900 * 109.47072 * 299.99905 * 13 11 10 17 17 C 1.53780 * 113.61287 * 252.49201 * 8 7 5 18 18 C 1.39709 * 119.61686 * 180.02562 * 4 3 2 19 19 C 1.37782 * 119.90703 * 0.26302 * 18 4 3 20 20 C 1.50705 * 119.85069 * 179.74141 * 19 18 4 21 21 O 1.42901 * 109.46650 * 64.99980 * 20 19 18 22 22 Si 1.86301 * 109.47300 * 184.99761 * 20 19 18 23 23 C 1.38548 * 120.30001 * 359.48541 * 19 18 4 24 24 C 1.38053 * 120.39153 * 0.51341 * 23 19 18 25 25 H 1.09005 * 109.46824 * 179.97438 * 1 2 3 26 26 H 1.08992 * 109.47448 * 299.99373 * 1 2 3 27 27 H 1.08998 * 109.47474 * 60.00057 * 1 2 3 28 28 H 0.96999 * 119.99664 * 359.97438 * 7 5 4 29 29 H 1.09002 * 113.61477 * 203.66479 * 10 8 7 30 30 H 1.08999 * 113.61297 * 334.47882 * 10 8 7 31 31 H 1.09003 * 113.61689 * 25.43606 * 17 8 7 32 32 H 1.09003 * 113.61648 * 156.33631 * 17 8 7 33 33 H 1.08002 * 120.04298 * 179.97438 * 18 4 3 34 34 H 1.09004 * 109.46997 * 305.00000 * 20 19 18 35 35 H 0.96693 * 114.00552 * 59.99954 * 21 20 19 36 36 H 1.48500 * 109.99858 * 180.02562 * 22 20 19 37 37 H 1.48504 * 109.99934 * 301.32163 * 22 20 19 38 38 H 1.08007 * 119.80253 * 180.23666 * 23 19 18 39 39 H 1.08007 * 119.95949 * 179.72212 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0447 1.2088 0.0000 4 6 3.4440 1.2858 0.0005 5 6 4.2550 0.0533 -0.0001 6 8 3.7095 -1.0333 -0.0005 7 7 5.6004 0.1319 -0.0001 8 6 6.4057 -1.0919 -0.0002 9 1 5.8706 -1.9506 -0.4055 10 6 7.8111 -0.9046 -0.5957 11 6 8.2770 -0.5345 0.8223 12 1 8.1895 0.5284 1.0472 13 6 9.6481 -1.1078 1.1861 14 9 10.6083 -0.6233 0.2915 15 9 9.9851 -0.7205 2.4876 16 9 9.6042 -2.5042 1.1122 17 6 7.0983 -1.3735 1.3436 18 6 4.0666 2.5365 0.0011 19 6 3.3036 3.6837 0.0066 20 6 3.9765 5.0322 0.0130 21 8 4.6987 5.2099 -1.2072 22 14 2.6882 6.3685 0.1724 23 6 1.9205 3.6033 0.0008 24 6 1.2923 2.3740 0.0002 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 6.0356 0.9988 0.0000 29 1 8.2518 -1.8272 -0.9732 30 1 7.8776 -0.0816 -1.3073 31 1 6.5899 -0.9283 2.1988 32 1 7.3443 -2.4244 1.4963 33 1 5.1445 2.6039 0.0019 34 1 4.6662 5.0900 0.8552 35 1 4.1469 5.1702 -2.0002 36 1 3.3391 7.7032 0.1794 37 1 1.7231 6.2803 -0.9528 38 1 1.3302 4.5078 0.0013 39 1 0.2136 2.3194 0.0002 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_12496546.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:05:56 Heat of formation + Delta-G solvation = -192.662195 kcal Electronic energy + Delta-G solvation = -28790.816376 eV Core-core repulsion = 24058.762985 eV Total energy + Delta-G solvation = -4732.053390 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.107 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -51.09950 -48.62062 -48.59008 -41.88206 -40.83038 -39.23049 -39.12823 -37.22014 -34.65244 -32.52314 -31.82818 -29.06244 -28.44497 -26.95177 -26.15555 -25.48469 -24.04286 -22.70858 -21.64811 -20.79584 -19.66404 -19.36523 -19.28926 -18.79323 -18.38734 -18.02097 -17.28898 -16.86729 -16.77544 -16.18720 -16.08672 -15.88225 -15.84365 -15.64654 -15.51125 -15.14357 -15.03424 -14.80346 -14.76974 -14.73364 -14.52988 -14.50405 -14.19231 -13.74827 -13.59100 -13.54840 -13.34453 -13.10316 -12.43963 -12.32305 -12.20580 -12.03792 -11.90005 -11.68025 -11.60262 -11.08203 -10.54716 -10.31591 -10.07802 -9.30048 -4.88700 -0.26972 0.22199 1.34416 1.61542 1.74008 1.77883 1.97585 2.01148 2.27033 2.65235 2.73796 2.80174 2.97267 3.39196 3.42580 3.53424 3.60440 3.64135 3.70319 3.74539 3.94604 3.98243 4.15874 4.30949 4.36652 4.39177 4.44145 4.57624 4.60952 4.63755 4.70716 4.74438 4.76860 4.85103 4.90585 4.94641 5.11864 5.28179 5.45134 5.56805 6.29014 6.47037 6.52754 7.17568 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.313 6.313 3 C 0.172 3.828 4 C -0.196 4.196 5 C 0.562 3.438 6 O -0.560 6.560 7 N -0.701 5.701 8 C 0.125 3.875 9 H 0.097 0.903 10 C -0.123 4.123 11 C -0.157 4.157 12 H 0.154 0.846 13 C 0.456 3.544 14 F -0.189 7.189 15 F -0.192 7.192 16 F -0.189 7.189 17 C -0.139 4.139 18 C -0.014 4.014 19 C -0.164 4.164 20 C -0.071 4.071 21 O -0.546 6.546 22 Si 0.758 3.242 23 C -0.044 4.044 24 C -0.213 4.213 25 H 0.107 0.893 26 H 0.075 0.925 27 H 0.071 0.929 28 H 0.413 0.587 29 H 0.110 0.890 30 H 0.107 0.893 31 H 0.087 0.913 32 H 0.105 0.895 33 H 0.154 0.846 34 H 0.132 0.868 35 H 0.386 0.614 36 H -0.307 1.307 37 H -0.280 1.280 38 H 0.154 0.846 39 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.137 4.825 0.587 6.383 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 O -0.225 6.225 3 C 0.124 3.876 4 C -0.200 4.200 5 C 0.351 3.649 6 O -0.439 6.439 7 N -0.354 5.354 8 C 0.019 3.981 9 H 0.115 0.885 10 C -0.161 4.161 11 C -0.177 4.177 12 H 0.172 0.828 13 C 0.402 3.598 14 F -0.170 7.170 15 F -0.174 7.174 16 F -0.170 7.170 17 C -0.178 4.178 18 C -0.033 4.033 19 C -0.165 4.165 20 C -0.180 4.180 21 O -0.354 6.354 22 Si 0.664 3.336 23 C -0.062 4.062 24 C -0.232 4.232 25 H 0.125 0.875 26 H 0.093 0.907 27 H 0.090 0.910 28 H 0.252 0.748 29 H 0.128 0.872 30 H 0.126 0.874 31 H 0.106 0.894 32 H 0.123 0.877 33 H 0.171 0.829 34 H 0.150 0.850 35 H 0.236 0.764 36 H -0.235 1.235 37 H -0.207 1.207 38 H 0.171 0.829 39 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -4.283 4.559 0.639 6.288 hybrid contribution 0.624 -0.087 -1.006 1.187 sum -3.659 4.472 -0.367 5.790 Atomic orbital electron populations 1.23443 0.76536 1.05472 1.02841 1.86333 1.23188 1.26412 1.86519 1.19422 0.91399 0.85502 0.91290 1.19367 0.91033 0.93927 1.15699 1.18264 0.82449 0.88645 0.75547 1.90828 1.72398 1.30294 1.50336 1.45446 1.05000 1.09656 1.75283 1.21651 0.91249 0.88616 0.96585 0.88455 1.23351 0.93413 1.05067 0.94237 1.24189 0.87904 1.04309 1.01253 0.82788 1.20757 0.89131 0.75894 0.74037 1.93184 1.67681 1.87832 1.68327 1.93183 1.93920 1.90843 1.39454 1.93156 1.96730 1.31122 1.95999 1.23517 0.93990 1.01404 0.98853 1.21129 1.00820 0.89041 0.92281 1.20153 0.93713 0.95913 1.06681 1.25070 1.04451 0.98529 0.89979 1.86581 1.38400 1.94200 1.16248 0.94187 0.76858 0.74278 0.88299 1.21317 0.93979 0.97918 0.92947 1.21458 1.01739 0.90949 1.09011 0.87468 0.90671 0.91038 0.74808 0.87175 0.87443 0.89403 0.87686 0.82864 0.85010 0.76449 1.23517 1.20685 0.82853 0.82192 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 9.81 113.37 1.11 1.09 16 2 O -0.31 -2.20 8.57 -68.79 -0.59 -2.78 16 3 C 0.17 0.61 6.70 22.84 0.15 0.77 16 4 C -0.20 -0.54 5.89 -20.01 -0.12 -0.66 16 5 C 0.56 3.38 7.76 86.70 0.67 4.05 16 6 O -0.56 -8.39 14.76 16.92 0.25 -8.14 16 7 N -0.70 1.24 5.21 -443.21 -2.31 -1.07 16 8 C 0.12 -0.22 4.32 45.52 0.20 -0.02 16 9 H 0.10 0.27 7.46 -2.39 -0.02 0.25 16 10 C -0.12 0.71 7.18 31.12 0.22 0.94 16 11 C -0.16 0.80 3.68 -10.27 -0.04 0.76 16 12 H 0.15 -1.46 8.14 -2.39 -0.02 -1.48 16 13 C 0.46 0.21 3.02 71.98 0.22 0.43 16 14 F -0.19 -0.48 17.18 44.97 0.77 0.30 16 15 F -0.19 -0.66 17.32 44.97 0.78 0.12 16 16 F -0.19 -0.54 15.76 44.97 0.71 0.16 16 17 C -0.14 0.39 7.32 31.12 0.23 0.62 16 18 C -0.01 0.05 9.16 22.52 0.21 0.25 16 19 C -0.16 0.78 5.35 -19.90 -0.11 0.67 16 20 C -0.07 0.42 2.79 71.24 0.20 0.62 16 21 O -0.55 1.53 12.83 -148.98 -1.91 -0.38 16 22 Si 0.76 -4.48 29.88 68.60 2.05 -2.43 16 23 C -0.04 0.23 8.65 22.30 0.19 0.42 16 24 C -0.21 0.58 9.03 22.34 0.20 0.78 16 25 H 0.11 -0.37 8.14 -2.38 -0.02 -0.39 16 26 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 27 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 28 H 0.41 -3.26 6.73 -92.71 -0.62 -3.88 16 29 H 0.11 -0.60 7.88 -2.39 -0.02 -0.62 16 30 H 0.11 -0.91 8.14 -2.39 -0.02 -0.93 16 31 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.10 -0.20 7.14 -2.39 -0.02 -0.22 16 33 H 0.15 -1.24 6.40 -2.91 -0.02 -1.26 16 34 H 0.13 -1.09 7.96 -2.38 -0.02 -1.11 16 35 H 0.39 -2.95 8.70 -74.06 -0.64 -3.59 16 36 H -0.31 -0.88 7.11 99.48 0.71 -0.18 16 37 H -0.28 0.69 7.00 99.48 0.70 1.39 16 38 H 0.15 -1.47 4.81 -2.91 -0.01 -1.48 16 39 H 0.16 -1.19 6.30 -2.91 -0.02 -1.21 16 Total: 0.00 -22.34 337.55 2.99 -19.36 By element: Atomic # 1 Polarization: -15.74 SS G_CDS: -0.10 Total: -15.84 kcal Atomic # 6 Polarization: 7.38 SS G_CDS: 3.34 Total: 10.73 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -2.31 Total: -1.07 kcal Atomic # 8 Polarization: -9.06 SS G_CDS: -2.25 Total: -11.31 kcal Atomic # 9 Polarization: -1.68 SS G_CDS: 2.26 Total: 0.58 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.05 Total: -2.43 kcal Total: -22.34 2.99 -19.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_12496546.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.304 kcal (2) G-P(sol) polarization free energy of solvation -22.345 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -195.649 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.358 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds