Wall clock time and date at job start Thu Mar 4 2021 19:06:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86294 * 109.47330 * 2 1 4 4 C 1.50699 * 109.46934 * 120.00186 * 2 1 3 5 5 C 1.35083 * 126.07877 * 255.26057 * 4 2 1 6 6 N 1.35033 * 107.98209 * 180.14356 * 5 4 2 7 7 C 1.46492 * 125.93156 * 179.89739 * 6 5 4 8 8 C 1.50703 * 109.47441 * 124.71555 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.09002 * 112.85447 * 23.52517 * 11 10 8 13 13 C 1.53782 * 113.61542 * 154.72141 * 11 10 8 14 14 C 1.53779 * 87.08038 * 89.11161 * 13 11 10 15 15 H 1.09003 * 113.61747 * 270.88529 * 14 13 11 16 16 C 1.53007 * 113.61545 * 139.98163 * 14 13 11 17 17 F 1.39895 * 109.46952 * 59.99881 * 16 14 13 18 18 F 1.39902 * 109.47413 * 180.02562 * 16 14 13 19 19 F 1.39907 * 109.46943 * 300.00156 * 16 14 13 20 20 C 1.53778 * 113.61220 * 252.21874 * 11 10 8 21 21 N 1.40070 * 108.13781 * 359.63480 * 6 5 4 22 22 C 1.31624 * 108.10855 * 0.22700 * 21 6 5 23 23 C 1.48422 * 126.03704 * 180.02562 * 22 21 6 24 24 C 1.39321 * 120.11959 * 144.70055 * 23 22 21 25 25 C 1.38026 * 119.88005 * 179.69809 * 24 23 22 26 26 C 1.38316 * 120.11577 * 0.57263 * 25 24 23 27 27 C 1.38316 * 120.24331 * 359.72700 * 26 25 24 28 28 C 1.38022 * 120.11995 * 359.97127 * 27 26 25 29 29 H 0.96701 * 114.00197 * 300.00160 * 1 2 3 30 30 H 1.09000 * 109.46595 * 240.00128 * 2 1 3 31 31 H 1.48506 * 110.00273 * 300.00299 * 3 2 1 32 32 H 1.48507 * 109.99713 * 61.31994 * 3 2 1 33 33 H 1.08007 * 126.00498 * 0.04048 * 5 4 2 34 34 H 1.08998 * 109.47276 * 4.71471 * 7 6 5 35 35 H 1.09002 * 109.47526 * 244.71783 * 7 6 5 36 36 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 37 37 H 1.08999 * 113.61850 * 203.66149 * 13 11 10 38 38 H 1.08997 * 113.61469 * 334.56635 * 13 11 10 39 39 H 1.08998 * 113.61637 * 25.42993 * 20 11 10 40 40 H 1.08999 * 113.61924 * 156.33648 * 20 11 10 41 41 H 1.08008 * 120.06317 * 359.97438 * 24 23 22 42 42 H 1.08000 * 119.94230 * 180.29970 * 25 24 23 43 43 H 1.07998 * 119.87823 * 179.74038 * 26 25 24 44 44 H 1.08008 * 119.94098 * 179.97438 * 27 26 25 45 45 H 1.08002 * 120.06007 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4583 -0.1248 2.3277 6 7 2.7884 -1.0992 3.2024 7 6 3.3930 -0.9012 4.5220 8 6 2.5388 -1.5657 5.5708 9 8 1.5246 -2.1470 5.2477 10 7 2.9014 -1.5131 6.8678 11 6 2.0742 -2.1643 7.8865 12 1 1.4595 -2.9685 7.4821 13 6 2.8535 -2.5612 9.1515 14 6 2.5218 -1.1631 9.6993 15 1 3.2596 -0.4049 9.4369 16 6 2.1645 -1.1567 11.1871 17 9 3.2437 -1.6501 11.9279 18 9 1.8792 0.1515 11.5926 19 9 1.0433 -1.9658 11.4009 20 6 1.2955 -1.1766 8.7714 21 7 2.4469 -2.3318 2.6314 22 6 1.9299 -2.1028 1.4428 23 6 1.4328 -3.1303 0.4941 24 6 0.3264 -2.8631 -0.3094 25 6 -0.1279 -3.8199 -1.1943 26 6 0.5059 -5.0466 -1.2758 27 6 1.6008 -5.3195 -0.4760 28 6 2.0673 -4.3677 0.4079 29 1 -0.3933 0.4417 0.7650 30 1 1.7922 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5879 2.4584 1.2243 33 1 2.5935 0.9361 2.4782 34 1 3.4630 0.1659 4.7331 35 1 4.3906 -1.3402 4.5343 36 1 3.7123 -1.0478 7.1262 37 1 2.3898 -3.3718 9.7137 38 1 3.9175 -2.7205 8.9768 39 1 1.1018 -0.2181 8.2899 40 1 0.4059 -1.6086 9.2297 41 1 -0.1721 -1.9073 -0.2431 42 1 -0.9825 -3.6120 -1.8211 43 1 0.1445 -5.7941 -1.9666 44 1 2.0918 -6.2792 -0.5433 45 1 2.9226 -4.5817 1.0317 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_12622748.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:06:01 Heat of formation + Delta-G solvation = -75.253679 kcal Electronic energy + Delta-G solvation = -34477.756486 eV Core-core repulsion = 29242.871022 eV Total energy + Delta-G solvation = -5234.885464 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.129 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.11761 -48.64542 -48.60646 -42.49270 -41.30612 -39.84903 -39.35998 -37.87361 -34.88178 -34.47056 -32.30928 -31.86899 -31.41461 -29.47736 -28.29106 -26.98142 -25.97994 -24.55851 -23.83415 -23.47357 -22.18802 -21.47585 -20.98184 -20.82843 -19.53538 -19.38136 -18.88659 -18.72755 -18.16121 -17.77481 -17.32892 -16.78612 -16.72016 -16.40979 -16.04774 -15.89749 -15.76821 -15.53555 -15.46504 -15.41243 -15.05801 -14.99045 -14.88703 -14.79201 -14.78702 -14.50660 -14.33155 -14.20654 -14.13600 -13.87534 -13.70020 -13.62341 -13.60509 -13.21493 -12.53688 -12.37971 -12.35483 -12.13295 -11.92342 -11.68696 -11.67113 -11.60095 -11.32780 -10.66949 -10.39372 -10.25313 -9.86214 -9.74603 -9.27803 -4.82458 0.08323 0.48669 0.82171 1.30588 1.42989 1.44126 1.66314 1.72440 1.77072 2.00597 2.06884 2.70093 2.78695 2.91429 2.95724 3.35312 3.38796 3.47479 3.50709 3.58898 3.67965 3.71872 3.92874 3.96881 4.04583 4.14157 4.15730 4.20552 4.34934 4.40042 4.47322 4.53813 4.54655 4.60501 4.62654 4.73242 4.81428 4.82021 4.88509 4.90093 5.01534 5.18750 5.32630 5.39700 5.58354 5.62828 5.65618 5.92654 6.06947 6.41174 6.58568 6.62806 7.12663 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.052 4.052 3 Si 0.785 3.215 4 C -0.262 4.262 5 C 0.075 3.925 6 N -0.359 5.359 7 C 0.110 3.890 8 C 0.499 3.501 9 O -0.564 6.564 10 N -0.694 5.694 11 C 0.126 3.874 12 H 0.087 0.913 13 C -0.123 4.123 14 C -0.153 4.153 15 H 0.163 0.837 16 C 0.453 3.547 17 F -0.189 7.189 18 F -0.193 7.193 19 F -0.192 7.192 20 C -0.140 4.140 21 N -0.293 5.293 22 C 0.110 3.890 23 C -0.037 4.037 24 C -0.113 4.113 25 C -0.132 4.132 26 C -0.117 4.117 27 C -0.131 4.131 28 C -0.108 4.108 29 H 0.383 0.617 30 H 0.105 0.895 31 H -0.307 1.307 32 H -0.261 1.261 33 H 0.219 0.781 34 H 0.181 0.819 35 H 0.148 0.852 36 H 0.424 0.576 37 H 0.102 0.898 38 H 0.113 0.887 39 H 0.091 0.909 40 H 0.097 0.903 41 H 0.152 0.848 42 H 0.140 0.860 43 H 0.145 0.855 44 H 0.142 0.858 45 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.702 5.271 0.869 9.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.160 4.160 3 Si 0.688 3.312 4 C -0.273 4.273 5 C -0.070 4.070 6 N -0.140 5.140 7 C -0.013 4.013 8 C 0.284 3.716 9 O -0.441 6.441 10 N -0.349 5.349 11 C 0.020 3.980 12 H 0.105 0.895 13 C -0.161 4.161 14 C -0.172 4.172 15 H 0.181 0.819 16 C 0.399 3.601 17 F -0.170 7.170 18 F -0.174 7.174 19 F -0.173 7.173 20 C -0.179 4.179 21 N -0.115 5.115 22 C -0.055 4.055 23 C -0.039 4.039 24 C -0.132 4.132 25 C -0.150 4.150 26 C -0.136 4.136 27 C -0.149 4.149 28 C -0.128 4.128 29 H 0.233 0.767 30 H 0.123 0.877 31 H -0.235 1.235 32 H -0.187 1.187 33 H 0.236 0.764 34 H 0.198 0.802 35 H 0.165 0.835 36 H 0.263 0.737 37 H 0.121 0.879 38 H 0.131 0.869 39 H 0.110 0.890 40 H 0.115 0.885 41 H 0.169 0.831 42 H 0.157 0.843 43 H 0.162 0.838 44 H 0.160 0.840 45 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges 7.274 4.526 1.191 8.650 hybrid contribution -1.387 0.200 0.641 1.541 sum 5.887 4.727 1.832 7.769 Atomic orbital electron populations 1.86457 1.19200 1.79737 1.50104 1.24628 0.82759 1.12203 0.96439 0.94060 0.89708 0.70177 0.77287 1.20549 1.14174 0.92291 1.00335 1.22842 0.98202 0.96733 0.89218 1.48137 1.48005 1.03569 1.14337 1.22027 0.96971 1.06490 0.75860 1.21172 0.85993 0.80178 0.84208 1.90847 1.27786 1.43842 1.81578 1.45393 1.28372 1.56348 1.04769 1.21576 0.93341 0.95568 0.87554 0.89512 1.23338 1.03796 0.94528 0.94442 1.24216 1.03197 1.03920 0.85907 0.81909 1.20862 0.74070 0.72858 0.92328 1.93186 1.55705 1.87856 1.80290 1.93184 1.93686 1.37917 1.92630 1.93158 1.54205 1.73949 1.96018 1.23498 0.96470 1.01952 0.95949 1.77688 1.20550 1.04276 1.08966 1.20834 0.98746 0.93653 0.92256 1.18043 0.97003 0.92633 0.96219 1.21996 0.95254 1.01335 0.94641 1.21407 1.00794 0.93767 0.99032 1.21584 0.95483 0.97391 0.99100 1.21357 0.97434 0.99829 0.96245 1.21324 1.00037 0.92808 0.98605 0.76701 0.87744 1.23523 1.18698 0.76439 0.80156 0.83495 0.73686 0.87922 0.86897 0.89002 0.88495 0.83127 0.84262 0.83762 0.83980 0.86255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.68 10.10 -148.98 -1.50 -3.19 16 2 C -0.05 -0.04 2.01 71.24 0.14 0.11 16 3 Si 0.78 -3.62 30.81 68.60 2.11 -1.51 16 4 C -0.26 -0.78 5.34 -19.95 -0.11 -0.89 16 5 C 0.08 -0.20 9.96 83.47 0.83 0.63 16 6 N -0.36 -0.24 3.40 -351.92 -1.20 -1.44 16 7 C 0.11 -1.05 6.99 85.64 0.60 -0.45 16 8 C 0.50 -1.06 7.86 87.66 0.69 -0.37 16 9 O -0.56 -6.39 15.30 -3.04 -0.05 -6.44 16 10 N -0.69 6.52 5.26 -440.04 -2.32 4.21 16 11 C 0.13 -0.69 4.33 45.52 0.20 -0.50 16 12 H 0.09 0.11 7.46 -2.39 -0.02 0.09 16 13 C -0.12 1.10 7.18 31.12 0.22 1.32 16 14 C -0.15 1.32 3.68 -10.26 -0.04 1.28 16 15 H 0.16 -2.38 8.14 -2.39 -0.02 -2.40 16 16 C 0.45 -0.75 3.02 71.98 0.22 -0.53 16 17 F -0.19 -0.10 17.18 44.97 0.77 0.68 16 18 F -0.19 -0.25 17.32 44.97 0.78 0.52 16 19 F -0.19 -0.34 15.75 44.97 0.71 0.37 16 20 C -0.14 0.83 7.32 31.12 0.23 1.06 16 21 N -0.29 -3.06 11.63 -48.15 -0.56 -3.62 16 22 C 0.11 1.09 6.74 42.53 0.29 1.37 16 23 C -0.04 -0.41 5.80 -20.04 -0.12 -0.52 16 24 C -0.11 -1.07 8.94 22.48 0.20 -0.87 16 25 C -0.13 -0.87 10.03 22.24 0.22 -0.64 16 26 C -0.12 -0.59 10.04 22.31 0.22 -0.36 16 27 C -0.13 -0.80 10.03 22.24 0.22 -0.58 16 28 C -0.11 -1.04 9.75 22.48 0.22 -0.82 16 29 H 0.38 -0.88 8.70 -74.06 -0.64 -1.53 16 30 H 0.10 0.23 7.84 -2.39 -0.02 0.21 16 31 H -0.31 -1.25 7.11 99.48 0.71 -0.55 16 32 H -0.26 1.13 6.99 99.48 0.70 1.82 16 33 H 0.22 -2.61 6.33 -2.91 -0.02 -2.63 16 34 H 0.18 -3.64 8.07 -2.39 -0.02 -3.66 16 35 H 0.15 -2.14 8.14 -2.39 -0.02 -2.16 16 36 H 0.42 -7.62 8.70 -92.71 -0.81 -8.42 16 37 H 0.10 -0.71 7.88 -2.39 -0.02 -0.73 16 38 H 0.11 -1.41 8.14 -2.39 -0.02 -1.43 16 39 H 0.09 -0.60 8.14 -2.39 -0.02 -0.61 16 40 H 0.10 -0.32 7.13 -2.39 -0.02 -0.34 16 41 H 0.15 1.37 4.52 -2.91 -0.01 1.36 16 42 H 0.14 0.35 8.06 -2.91 -0.02 0.33 16 43 H 0.14 -0.02 8.06 -2.91 -0.02 -0.05 16 44 H 0.14 0.20 8.06 -2.91 -0.02 0.18 16 45 H 0.12 1.09 8.06 -2.91 -0.02 1.07 16 Total: 0.00 -33.30 391.30 2.65 -30.65 By element: Atomic # 1 Polarization: -19.12 SS G_CDS: -0.34 Total: -19.47 kcal Atomic # 6 Polarization: -5.00 SS G_CDS: 4.24 Total: -0.76 kcal Atomic # 7 Polarization: 3.22 SS G_CDS: -4.07 Total: -0.85 kcal Atomic # 8 Polarization: -8.08 SS G_CDS: -1.55 Total: -9.63 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 2.26 Total: 1.57 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: 2.11 Total: -1.51 kcal Total: -33.30 2.65 -30.65 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_12622748.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.608 kcal (2) G-P(sol) polarization free energy of solvation -33.295 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.650 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.645 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds