Wall clock time and date at job start Thu Mar 4 2021 19:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86298 * 109.46825 * 2 1 4 4 C 1.50703 * 109.46819 * 119.99442 * 2 1 3 5 5 C 1.38896 * 119.67646 * 244.99943 * 4 2 1 6 6 C 1.36475 * 120.61606 * 180.02562 * 5 4 2 7 7 C 1.40062 * 119.82729 * 0.02788 * 6 5 4 8 8 C 1.41592 * 133.37885 * 180.32360 * 7 6 5 9 9 C 1.35858 * 107.72803 * 180.02562 * 8 7 6 10 10 C 1.47061 * 125.42901 * 179.90371 * 9 8 7 11 11 O 1.21647 * 119.99625 * 359.69495 * 10 9 8 12 12 N 1.34775 * 120.00303 * 179.69871 * 10 9 8 13 13 C 1.46497 * 120.00126 * 180.02562 * 12 10 9 14 14 H 1.09002 * 112.84935 * 25.32833 * 13 12 10 15 15 C 1.53786 * 113.61643 * 156.52505 * 13 12 10 16 16 C 1.53782 * 87.07909 * 89.19525 * 15 13 12 17 17 H 1.08997 * 113.61784 * 270.88529 * 16 15 13 18 18 C 1.53002 * 113.61144 * 140.06321 * 16 15 13 19 19 F 1.39896 * 109.46991 * 60.00303 * 18 16 15 20 20 F 1.39900 * 109.47254 * 180.02562 * 18 16 15 21 21 F 1.39902 * 109.47273 * 300.00455 * 18 16 15 22 22 C 1.53781 * 113.61305 * 254.13352 * 13 12 10 23 23 N 1.38155 * 109.14954 * 359.64260 * 9 8 7 24 24 C 1.37491 * 108.78389 * 0.22598 * 23 9 8 25 25 C 1.37711 * 119.67530 * 65.10351 * 4 2 1 26 26 H 0.96696 * 113.99515 * 60.00481 * 1 2 3 27 27 H 1.08993 * 109.47249 * 239.99648 * 2 1 3 28 28 H 1.48508 * 109.99891 * 298.67727 * 3 2 1 29 29 H 1.48500 * 110.00174 * 59.99707 * 3 2 1 30 30 H 1.08003 * 119.69052 * 0.02740 * 5 4 2 31 31 H 1.08001 * 120.08312 * 180.02562 * 6 5 4 32 32 H 1.07999 * 126.13658 * 359.93052 * 8 7 6 33 33 H 0.97006 * 119.99816 * 359.97438 * 12 10 9 34 34 H 1.08993 * 113.61491 * 203.74894 * 15 13 12 35 35 H 1.09000 * 113.61138 * 334.65232 * 15 13 12 36 36 H 1.09001 * 113.61695 * 25.34675 * 22 13 12 37 37 H 1.08997 * 113.61223 * 156.25258 * 22 13 12 38 38 H 0.96993 * 125.61141 * 180.22299 * 23 9 8 39 39 H 1.08002 * 120.09358 * 359.93921 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6414 -0.0022 2.1916 6 6 3.1055 -0.6264 3.3131 7 6 2.8658 -1.9937 3.4991 8 6 3.1988 -2.9083 4.5274 9 6 2.7042 -4.1239 4.1760 10 6 2.8309 -5.3570 4.9673 11 8 3.4233 -5.3398 6.0296 12 7 2.2906 -6.5062 4.5155 13 6 2.4164 -7.7344 5.3041 14 1 2.5508 -7.5421 6.3686 15 6 1.3274 -8.7766 4.9990 16 6 2.2643 -9.3204 3.9075 17 1 2.1300 -8.8407 2.9380 18 6 2.2792 -10.8477 3.8179 19 9 0.9906 -11.3105 3.5305 20 9 3.1555 -11.2468 2.8030 21 9 2.7053 -11.3824 5.0384 22 6 3.4300 -8.7362 4.7264 23 7 2.0580 -4.0159 2.9596 24 6 2.1457 -2.7142 2.5259 25 6 1.6837 -2.0555 1.3901 26 1 -0.3932 0.4416 -0.7651 27 1 1.7924 -0.5139 -0.8899 28 1 1.5879 2.4585 -1.2243 29 1 1.5614 2.4679 1.2084 30 1 2.8279 1.0521 2.0502 31 1 3.6563 -0.0674 4.0550 32 1 3.7487 -2.6809 5.4286 33 1 1.8179 -6.5198 3.6686 34 1 1.1538 -9.4782 5.8148 35 1 0.4065 -8.3440 4.6081 36 1 4.2039 -8.2713 4.1156 37 1 3.8321 -9.4269 5.4675 38 1 1.6155 -4.7394 2.4890 39 1 1.1312 -2.5975 0.6368 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_13158378.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:06:19 Heat of formation + Delta-G solvation = -126.116140 kcal Electronic energy + Delta-G solvation = -28586.846063 eV Core-core repulsion = 23854.482326 eV Total energy + Delta-G solvation = -4732.363737 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 341.103 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.11896 -48.63998 -48.61277 -42.72990 -41.24284 -39.53448 -38.78500 -37.08414 -34.75247 -33.32062 -31.24741 -30.44254 -29.13133 -27.00477 -26.92030 -24.80338 -23.85487 -23.18783 -21.95678 -21.33744 -20.89769 -19.79329 -19.38900 -19.30475 -18.73675 -18.50975 -17.93183 -17.29755 -16.93934 -16.50952 -16.42497 -15.97388 -15.59534 -15.53949 -15.29377 -15.15838 -15.06499 -15.05093 -14.81004 -14.80016 -14.78456 -14.70347 -14.29603 -14.25672 -13.88369 -13.70093 -13.62266 -13.51108 -12.72269 -12.38903 -12.32000 -12.13654 -11.96812 -11.68215 -11.67775 -11.48157 -10.96301 -10.45916 -10.38793 -9.33959 -8.82938 -4.87144 -0.38604 0.52077 0.91902 1.33370 1.63710 1.67655 1.76777 1.89153 2.00214 2.12992 2.69250 2.72774 2.77489 2.94123 3.34887 3.41147 3.48048 3.56703 3.65654 3.67091 3.87388 3.91300 4.04222 4.21309 4.30158 4.38452 4.43095 4.45974 4.55662 4.56777 4.63850 4.69973 4.81914 4.85295 4.89093 4.98450 5.24942 5.35691 5.39477 5.54358 5.57640 5.96850 6.19862 6.41557 6.61585 6.89025 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.082 4.082 3 Si 0.763 3.237 4 C -0.052 4.052 5 C -0.151 4.151 6 C -0.059 4.059 7 C -0.136 4.136 8 C -0.115 4.115 9 C 0.011 3.989 10 C 0.593 3.407 11 O -0.554 6.554 12 N -0.697 5.697 13 C 0.124 3.876 14 H 0.105 0.895 15 C -0.122 4.122 16 C -0.160 4.160 17 H 0.155 0.845 18 C 0.455 3.545 19 F -0.189 7.189 20 F -0.193 7.193 21 F -0.188 7.188 22 C -0.139 4.139 23 N -0.563 5.563 24 C 0.109 3.891 25 C -0.110 4.110 26 H 0.395 0.605 27 H 0.099 0.901 28 H -0.288 1.288 29 H -0.299 1.299 30 H 0.141 0.859 31 H 0.148 0.852 32 H 0.157 0.843 33 H 0.413 0.587 34 H 0.112 0.888 35 H 0.109 0.891 36 H 0.088 0.912 37 H 0.107 0.893 38 H 0.432 0.568 39 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.352 1.140 -4.950 5.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.368 6.368 2 C -0.191 4.191 3 Si 0.669 3.331 4 C -0.054 4.054 5 C -0.169 4.169 6 C -0.077 4.077 7 C -0.140 4.140 8 C -0.142 4.142 9 C -0.099 4.099 10 C 0.380 3.620 11 O -0.431 6.431 12 N -0.348 5.348 13 C 0.019 3.981 14 H 0.123 0.877 15 C -0.159 4.159 16 C -0.179 4.179 17 H 0.172 0.828 18 C 0.401 3.599 19 F -0.171 7.171 20 F -0.175 7.175 21 F -0.170 7.170 22 C -0.178 4.178 23 N -0.169 5.169 24 C -0.002 4.002 25 C -0.130 4.130 26 H 0.246 0.754 27 H 0.117 0.883 28 H -0.216 1.216 29 H -0.227 1.227 30 H 0.159 0.841 31 H 0.166 0.834 32 H 0.174 0.826 33 H 0.251 0.749 34 H 0.130 0.870 35 H 0.128 0.872 36 H 0.107 0.893 37 H 0.125 0.875 38 H 0.273 0.727 39 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -0.110 1.420 -3.672 3.938 hybrid contribution -1.540 -0.913 -1.072 2.087 sum -1.650 0.508 -4.744 5.048 Atomic orbital electron populations 1.86553 1.18435 1.80682 1.51123 1.24965 0.84087 1.11644 0.98403 0.94016 0.90498 0.72401 0.76176 1.19198 0.97646 0.92994 0.95538 1.20683 1.01323 1.00341 0.94595 1.20607 0.97773 0.91875 0.97465 1.18433 1.04420 0.95027 0.96131 1.21106 1.02559 0.90539 1.00027 1.19920 1.05295 0.95434 0.89276 1.17205 0.78289 0.82241 0.84270 1.90878 1.43354 1.85516 1.23352 1.45398 1.56896 1.07479 1.25031 1.21744 0.96615 0.82743 0.97040 0.87690 1.23355 0.97719 0.97223 0.97641 1.24255 1.02294 0.86822 1.04496 0.82769 1.20781 0.72963 0.93205 0.72963 1.93187 1.39380 1.91094 1.93396 1.93184 1.70155 1.92872 1.61277 1.93161 1.89982 1.88667 1.45174 1.23560 0.96333 0.98297 0.99590 1.41743 1.48393 1.08960 1.17817 1.18393 1.00693 0.84519 0.96568 1.20007 1.02583 0.94147 0.96291 0.75447 0.88290 1.21584 1.22706 0.84132 0.83428 0.82569 0.74950 0.86961 0.87243 0.89298 0.87473 0.72682 0.84397 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.17 12.80 -148.98 -1.91 -2.08 16 2 C -0.08 0.20 2.78 71.24 0.20 0.40 16 3 Si 0.76 -2.30 29.82 68.60 2.05 -0.26 16 4 C -0.05 -0.04 5.39 -19.83 -0.11 -0.15 16 5 C -0.15 -0.08 8.59 22.02 0.19 0.10 16 6 C -0.06 -0.08 10.06 22.30 0.22 0.15 16 7 C -0.14 -0.47 6.16 -21.36 -0.13 -0.61 16 8 C -0.12 -0.45 10.53 22.54 0.24 -0.21 16 9 C 0.01 0.01 6.97 39.91 0.28 0.29 16 10 C 0.59 1.09 7.80 86.56 0.68 1.77 16 11 O -0.55 -5.63 16.46 -4.18 -0.07 -5.69 16 12 N -0.70 4.19 5.26 -443.64 -2.33 1.85 16 13 C 0.12 -0.69 4.30 45.52 0.20 -0.50 16 14 H 0.11 -0.18 7.50 -2.39 -0.02 -0.20 16 15 C -0.12 1.10 7.18 31.12 0.22 1.32 16 16 C -0.16 1.25 3.69 -10.21 -0.04 1.21 16 17 H 0.15 -1.93 8.14 -2.39 -0.02 -1.95 16 18 C 0.45 -0.69 3.02 71.98 0.22 -0.47 16 19 F -0.19 -0.13 17.18 44.97 0.77 0.64 16 20 F -0.19 -0.36 17.32 44.97 0.78 0.42 16 21 F -0.19 -0.20 15.77 44.97 0.71 0.51 16 22 C -0.14 0.81 7.33 31.18 0.23 1.04 16 23 N -0.56 1.83 6.07 -177.19 -1.08 0.75 16 24 C 0.11 0.15 7.25 39.13 0.28 0.43 16 25 C -0.11 -0.05 9.69 22.37 0.22 0.16 16 26 H 0.40 -2.99 8.74 -74.06 -0.65 -3.63 16 27 H 0.10 -0.68 7.96 -2.39 -0.02 -0.70 16 28 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 29 H -0.30 -1.34 7.04 99.48 0.70 -0.64 16 30 H 0.14 -0.38 4.81 -2.91 -0.01 -0.40 16 31 H 0.15 -0.42 8.06 -2.91 -0.02 -0.44 16 32 H 0.16 0.53 8.06 -2.91 -0.02 0.50 16 33 H 0.41 -5.18 7.76 -92.70 -0.72 -5.90 16 34 H 0.11 -0.95 7.88 -2.39 -0.02 -0.96 16 35 H 0.11 -1.32 8.14 -2.39 -0.02 -1.34 16 36 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 37 H 0.11 -0.50 7.15 -2.39 -0.02 -0.52 16 38 H 0.43 -4.59 8.12 -92.71 -0.75 -5.34 16 39 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 Total: 0.00 -21.85 344.07 0.88 -20.97 By element: Atomic # 1 Polarization: -21.13 SS G_CDS: -0.93 Total: -22.06 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: 2.89 Total: 4.94 kcal Atomic # 7 Polarization: 6.02 SS G_CDS: -3.41 Total: 2.61 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.98 Total: -7.77 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 2.26 Total: 1.57 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: 2.05 Total: -0.26 kcal Total: -21.85 0.88 -20.97 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_13158378.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.150 kcal (2) G-P(sol) polarization free energy of solvation -21.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -126.999 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.883 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.966 kcal (6) G-S(sol) free energy of system = (1) + (5) -126.116 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds