Wall clock time and date at job start Thu Mar 4 2021 19:07:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47176 * 2 1 4 4 C 1.50698 * 109.47151 * 120.00236 * 2 1 3 5 5 C 1.31116 * 118.54687 * 249.73036 * 4 2 1 6 6 N 1.38924 * 121.85180 * 179.87540 * 5 4 2 7 7 C 1.47032 * 118.88012 * 13.31606 * 6 5 4 8 8 C 1.53541 * 107.66006 * 316.33454 * 7 6 5 9 9 C 1.50206 * 118.54841 * 70.00046 * 4 2 1 10 10 C 1.50704 * 109.32561 * 320.03146 * 9 4 2 11 11 O 1.21280 * 119.99840 * 239.99886 * 10 9 4 12 12 N 1.34771 * 120.00260 * 59.99798 * 10 9 4 13 13 C 1.46498 * 120.00248 * 179.97438 * 12 10 9 14 14 H 1.09000 * 112.84722 * 25.33798 * 13 12 10 15 15 C 1.53781 * 113.61468 * 156.53261 * 13 12 10 16 16 C 1.53779 * 87.08150 * 89.11905 * 15 13 12 17 17 H 1.08998 * 113.61627 * 270.88157 * 16 15 13 18 18 C 1.53005 * 113.61259 * 140.06325 * 16 15 13 19 19 F 1.39895 * 109.46951 * 60.00352 * 18 16 15 20 20 F 1.39906 * 109.46653 * 180.02562 * 18 16 15 21 21 F 1.39897 * 109.47263 * 299.99960 * 18 16 15 22 22 C 1.53785 * 113.61615 * 254.14167 * 13 12 10 23 23 H 0.96698 * 114.00102 * 299.99798 * 1 2 3 24 24 H 1.09002 * 109.47232 * 240.00335 * 2 1 3 25 25 H 1.48499 * 110.00241 * 300.00137 * 3 2 1 26 26 H 1.48499 * 110.00044 * 61.32265 * 3 2 1 27 27 H 1.07999 * 119.07509 * 359.84928 * 5 4 2 28 28 H 0.97002 * 120.55841 * 193.29505 * 6 5 4 29 29 H 1.09003 * 109.81727 * 196.80014 * 7 6 5 30 30 H 1.09002 * 109.82252 * 75.87744 * 7 6 5 31 31 H 1.08999 * 109.62248 * 301.22878 * 8 7 6 32 32 H 1.08993 * 109.62403 * 180.67326 * 8 7 6 33 33 H 1.08994 * 109.32888 * 79.68065 * 9 4 2 34 34 H 0.97004 * 119.99918 * 0.02562 * 12 10 9 35 35 H 1.09006 * 113.61308 * 203.66661 * 15 13 12 36 36 H 1.08997 * 113.61376 * 334.56563 * 15 13 12 37 37 H 1.09000 * 113.61633 * 25.43147 * 22 13 12 38 38 H 1.09005 * 113.61022 * 156.33678 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.5164 -0.0037 2.1671 6 7 3.0026 -0.5875 3.3302 7 6 3.1277 -2.0512 3.3914 8 6 1.8527 -2.6535 2.7838 9 6 1.7451 -2.1978 1.3268 10 6 0.3869 -2.5664 0.7878 11 8 -0.4191 -3.1223 1.5036 12 7 0.0678 -2.2783 -0.4895 13 6 -1.2523 -2.6371 -1.0136 14 1 -2.0110 -2.7113 -0.2345 15 6 -1.6882 -1.7877 -2.2191 16 6 -0.9927 -2.8329 -3.1072 17 1 0.0605 -2.6195 -3.2897 18 6 -1.7635 -3.1591 -4.3880 19 9 -1.9132 -1.9962 -5.1511 20 9 -1.0571 -4.1145 -5.1267 21 9 -3.0249 -3.6654 -4.0571 22 6 -1.2294 -3.8427 -1.9681 23 1 -0.3933 0.4417 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 1.5615 2.4679 -1.2084 26 1 1.5880 2.4585 1.2243 27 1 2.6237 1.0622 2.0304 28 1 3.2555 -0.0387 4.0890 29 1 3.2293 -2.3703 4.4287 30 1 3.9976 -2.3721 2.8182 31 1 0.9825 -2.3066 3.3411 32 1 1.9067 -3.7413 2.8240 33 1 2.5146 -2.6966 0.7376 34 1 0.7126 -1.8340 -1.0621 35 1 -2.7687 -1.7472 -2.3569 36 1 -1.2191 -0.8044 -2.2528 37 1 -0.3901 -4.5173 -1.7993 38 1 -2.1847 -4.3629 -2.0373 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_15608500.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:07:18 Heat of formation + Delta-G solvation = -152.889812 kcal Electronic energy + Delta-G solvation = -27037.117803 eV Core-core repulsion = 22660.960016 eV Total energy + Delta-G solvation = -4376.157787 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.118 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -51.10976 -48.63249 -48.60025 -41.68493 -40.09720 -38.74136 -37.62038 -34.34614 -33.19136 -32.65671 -29.04948 -27.21547 -26.88948 -25.90661 -23.94911 -23.20877 -21.94032 -20.70918 -19.56283 -19.37325 -19.23623 -19.03694 -18.59891 -17.83201 -17.32011 -16.95092 -16.31845 -16.00831 -15.78334 -15.57203 -15.52076 -15.22779 -15.10673 -15.04216 -14.78621 -14.78056 -14.63553 -14.42424 -14.21579 -13.92830 -13.89767 -13.56183 -13.34022 -13.14885 -12.68213 -12.30218 -12.16858 -11.84798 -11.81371 -11.63263 -11.55562 -11.35998 -10.70680 -10.34216 -9.81936 -8.41142 -4.82660 1.31017 1.44414 1.63771 1.78124 1.82932 2.05922 2.29306 2.69920 2.74674 2.81495 2.98759 3.44665 3.53933 3.64645 3.69732 3.73491 3.87893 3.97019 4.05179 4.25487 4.36667 4.41697 4.50869 4.59576 4.63022 4.68405 4.75187 4.82076 4.84589 4.87999 4.94299 5.03802 5.25497 5.30847 5.48767 5.66444 6.35314 6.58204 6.70069 6.97260 7.40716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.057 4.057 3 Si 0.748 3.252 4 C -0.289 4.289 5 C 0.155 3.845 6 N -0.747 5.747 7 C 0.122 3.878 8 C -0.119 4.119 9 C -0.036 4.036 10 C 0.533 3.467 11 O -0.594 6.594 12 N -0.675 5.675 13 C 0.136 3.864 14 H 0.085 0.915 15 C -0.120 4.120 16 C -0.156 4.156 17 H 0.152 0.848 18 C 0.455 3.545 19 F -0.190 7.190 20 F -0.192 7.192 21 F -0.189 7.189 22 C -0.141 4.141 23 H 0.374 0.626 24 H 0.126 0.874 25 H -0.311 1.311 26 H -0.296 1.296 27 H 0.144 0.856 28 H 0.411 0.589 29 H 0.093 0.907 30 H 0.076 0.924 31 H 0.050 0.950 32 H 0.075 0.925 33 H 0.114 0.886 34 H 0.411 0.589 35 H 0.100 0.900 36 H 0.103 0.897 37 H 0.088 0.912 38 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.917 2.690 2.286 8.668 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.168 4.168 3 Si 0.657 3.343 4 C -0.300 4.300 5 C 0.032 3.968 6 N -0.377 5.377 7 C -0.002 4.002 8 C -0.158 4.158 9 C -0.057 4.057 10 C 0.321 3.679 11 O -0.475 6.475 12 N -0.328 5.328 13 C 0.029 3.971 14 H 0.104 0.896 15 C -0.158 4.158 16 C -0.175 4.175 17 H 0.170 0.830 18 C 0.401 3.599 19 F -0.171 7.171 20 F -0.173 7.173 21 F -0.171 7.171 22 C -0.179 4.179 23 H 0.223 0.777 24 H 0.143 0.857 25 H -0.240 1.240 26 H -0.224 1.224 27 H 0.161 0.839 28 H 0.247 0.753 29 H 0.112 0.888 30 H 0.094 0.906 31 H 0.068 0.932 32 H 0.094 0.906 33 H 0.132 0.868 34 H 0.251 0.749 35 H 0.118 0.882 36 H 0.121 0.879 37 H 0.106 0.894 38 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 7.254 2.669 2.192 8.034 hybrid contribution -1.290 0.224 0.140 1.317 sum 5.965 2.893 2.331 7.027 Atomic orbital electron populations 1.86679 1.18581 1.79463 1.49671 1.24777 0.83587 1.09652 0.98780 0.94424 0.91055 0.73530 0.75330 1.20445 1.14183 0.94094 1.01314 1.20699 0.92164 0.97297 0.86611 1.44704 1.71023 1.06711 1.15242 1.21686 0.96372 0.79870 1.02290 1.21668 0.98650 1.00986 0.94511 1.19718 0.93670 0.94727 0.97618 1.20814 0.89470 0.76291 0.81343 1.90681 1.52975 1.44939 1.58935 1.45598 1.15361 1.59714 1.12098 1.21420 0.86645 0.94203 0.94817 0.89634 1.23251 1.01880 0.98488 0.92179 1.24224 1.02646 1.01843 0.88813 0.82993 1.20799 0.78211 0.73848 0.87029 1.93179 1.95891 1.49425 1.78628 1.93180 1.78505 1.65738 1.79914 1.93150 1.43800 1.87747 1.92402 1.23588 1.04414 0.96976 0.92968 0.77746 0.85669 1.23977 1.22442 0.83913 0.75288 0.88841 0.90555 0.93156 0.90631 0.86794 0.74899 0.88189 0.87894 0.89376 0.88200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.77 9.31 -148.98 -1.39 0.38 16 2 C -0.06 0.39 1.74 71.24 0.12 0.51 16 3 Si 0.75 -4.28 29.95 68.60 2.05 -2.23 16 4 C -0.29 1.47 5.14 -16.76 -0.09 1.39 16 5 C 0.16 -0.93 9.62 83.41 0.80 -0.12 16 6 N -0.75 4.99 5.83 -345.89 -2.02 2.98 16 7 C 0.12 -0.79 7.16 86.46 0.62 -0.17 16 8 C -0.12 0.10 4.91 30.79 0.15 0.25 16 9 C -0.04 0.09 2.74 -12.43 -0.03 0.05 16 10 C 0.53 1.73 6.36 87.66 0.56 2.28 16 11 O -0.59 -7.66 15.42 -3.03 -0.05 -7.70 16 12 N -0.68 1.22 2.92 -440.04 -1.29 -0.07 16 13 C 0.14 -0.02 4.25 45.52 0.19 0.17 16 14 H 0.09 0.43 7.50 -2.39 -0.02 0.41 16 15 C -0.12 0.35 7.17 31.12 0.22 0.57 16 16 C -0.16 0.50 3.69 -10.17 -0.04 0.46 16 17 H 0.15 -1.15 8.14 -2.39 -0.02 -1.17 16 18 C 0.45 0.94 3.02 71.98 0.22 1.16 16 19 F -0.19 -0.80 17.18 44.97 0.77 -0.03 16 20 F -0.19 -0.86 17.32 44.97 0.78 -0.08 16 21 F -0.19 -0.86 15.77 44.97 0.71 -0.16 16 22 C -0.14 0.19 7.34 31.21 0.23 0.42 16 23 H 0.37 -1.58 8.70 -74.06 -0.64 -2.22 16 24 H 0.13 -1.35 6.42 -2.39 -0.02 -1.36 16 25 H -0.31 -0.98 7.11 99.48 0.71 -0.27 16 26 H -0.30 0.16 6.84 99.48 0.68 0.84 16 27 H 0.14 -1.20 4.30 -2.91 -0.01 -1.21 16 28 H 0.41 -4.04 8.96 -92.71 -0.83 -4.87 16 29 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 30 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 31 H 0.05 0.26 7.75 -2.39 -0.02 0.24 16 32 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 33 H 0.11 -0.71 8.14 -2.39 -0.02 -0.73 16 34 H 0.41 -2.60 5.65 -92.71 -0.52 -3.13 16 35 H 0.10 -0.20 7.88 -2.38 -0.02 -0.22 16 36 H 0.10 -0.39 7.99 -2.39 -0.02 -0.41 16 37 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.10 -0.02 7.15 -2.38 -0.02 -0.03 16 Total: 0.00 -17.40 311.95 1.69 -15.71 By element: Atomic # 1 Polarization: -14.94 SS G_CDS: -0.85 Total: -15.78 kcal Atomic # 6 Polarization: 4.02 SS G_CDS: 2.96 Total: 6.98 kcal Atomic # 7 Polarization: 6.21 SS G_CDS: -3.30 Total: 2.91 kcal Atomic # 8 Polarization: -5.89 SS G_CDS: -1.43 Total: -7.32 kcal Atomic # 9 Polarization: -2.53 SS G_CDS: 2.26 Total: -0.27 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: 2.05 Total: -2.23 kcal Total: -17.40 1.69 -15.71 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_15608500.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.176 kcal (2) G-P(sol) polarization free energy of solvation -17.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.580 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.690 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.714 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds