Wall clock time and date at job start Thu Mar 4 2021 19:08:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86300 * 109.47229 * 2 1 4 4 C 1.50699 * 109.47317 * 120.00368 * 2 1 3 5 5 C 1.38243 * 119.96977 * 245.00086 * 4 2 1 6 6 C 1.38294 * 120.11034 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05474 * 359.97438 * 6 5 4 8 8 C 1.38757 * 119.94523 * 359.97438 * 7 6 5 9 9 O 1.35903 * 120.05410 * 180.02562 * 8 7 6 10 10 C 1.42900 * 117.00134 * 359.97438 * 9 8 7 11 11 C 1.50703 * 109.46859 * 180.02562 * 10 9 8 12 12 O 1.21277 * 119.99948 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99369 * 180.02562 * 11 10 9 14 14 C 1.46496 * 119.99390 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.91246 * 23.74616 * 14 13 11 16 16 C 1.53786 * 113.61518 * 154.99856 * 14 13 11 17 17 C 1.53781 * 87.17350 * 89.15486 * 16 14 13 18 18 H 1.08997 * 113.61223 * 270.84552 * 17 16 14 19 19 C 1.53003 * 113.61480 * 139.93948 * 17 16 14 20 20 F 1.39899 * 109.46818 * 60.00045 * 19 17 16 21 21 F 1.39900 * 109.46912 * 180.02562 * 19 17 16 22 22 F 1.39905 * 109.47042 * 300.00093 * 19 17 16 23 23 C 1.53782 * 87.08260 * 25.39213 * 17 16 14 24 24 C 1.38168 * 119.97165 * 65.25233 * 4 2 1 25 25 H 0.96695 * 113.99765 * 299.99802 * 1 2 3 26 26 H 1.09003 * 109.47007 * 240.00383 * 2 1 3 27 27 H 1.48496 * 110.00111 * 178.68071 * 3 2 1 28 28 H 1.48497 * 109.99977 * 300.00159 * 3 2 1 29 29 H 1.07993 * 119.94667 * 359.97438 * 5 4 2 30 30 H 1.07997 * 119.96988 * 179.97438 * 6 5 4 31 31 H 1.08003 * 120.02818 * 179.97438 * 7 6 5 32 32 H 1.09002 * 109.47129 * 60.00151 * 10 9 8 33 33 H 1.09002 * 109.46992 * 300.00256 * 10 9 8 34 34 H 0.97001 * 120.00492 * 359.97438 * 13 11 10 35 35 H 1.09002 * 113.61357 * 334.56403 * 16 14 13 36 36 H 1.09002 * 113.61608 * 203.74565 * 16 14 13 37 37 H 1.08997 * 113.61668 * 89.11298 * 23 17 16 38 38 H 1.08998 * 113.61674 * 219.93807 * 23 17 16 39 39 H 1.08001 * 120.03079 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 2.6388 -0.0117 2.1909 6 6 3.1016 -0.6609 3.3208 7 6 2.8575 -2.0095 3.4926 8 6 2.1469 -2.7129 2.5305 9 8 1.9050 -4.0397 2.6975 10 6 2.4123 -4.6469 3.8875 11 6 2.0504 -6.1098 3.8985 12 8 1.4204 -6.5856 2.9778 13 7 2.4267 -6.8892 4.9317 14 6 2.0754 -8.3114 4.9421 15 1 1.8955 -8.7114 3.9443 16 6 3.0250 -9.1744 5.7897 17 6 2.1001 -8.8844 6.9836 18 1 2.3684 -7.9832 7.5349 19 6 1.8756 -10.0942 7.8930 20 9 3.1028 -10.5230 8.4100 21 9 1.0255 -9.7356 8.9447 22 9 1.2927 -11.1303 7.1553 23 6 0.9748 -8.6672 5.9583 24 6 1.6891 -2.0607 1.3950 25 1 -0.3933 0.4417 0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5615 2.4679 -1.2085 29 1 2.8310 1.0426 2.0582 30 1 3.6543 -0.1130 4.0695 31 1 3.2195 -2.5162 4.3751 32 1 1.9770 -4.1579 4.7590 33 1 3.4968 -4.5411 3.9154 34 1 2.9309 -6.5087 5.6679 35 1 4.0229 -8.7490 5.8970 36 1 3.0416 -10.2237 5.4950 37 1 0.4298 -9.5776 5.7087 38 1 0.3167 -7.8333 6.2023 39 1 1.1403 -2.6071 0.6423 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15744634_4860298.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 19:08:06 Heat of formation + Delta-G solvation = -196.500634 kcal Electronic energy + Delta-G solvation = -27485.275350 eV Core-core repulsion = 22753.055512 eV Total energy + Delta-G solvation = -4732.219837 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.107 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.10031 -48.62625 -48.59062 -41.69637 -41.03996 -39.63984 -38.76449 -37.21892 -34.68461 -32.46797 -31.68457 -29.85295 -28.40207 -26.96026 -26.79320 -24.23420 -23.67135 -22.83370 -21.71917 -20.83732 -19.53029 -19.36860 -19.33813 -18.79638 -18.31741 -17.68176 -17.45353 -17.26275 -16.98812 -16.70457 -16.18360 -15.85179 -15.65240 -15.51259 -15.41501 -15.08565 -15.03754 -14.88627 -14.78460 -14.77099 -14.66530 -14.25845 -14.18779 -14.01975 -13.77483 -13.60313 -13.38231 -12.92568 -12.60633 -12.33737 -12.13869 -12.01777 -11.91877 -11.68254 -11.66196 -11.08609 -10.48815 -10.29392 -9.93351 -9.28060 -4.98899 0.21265 0.39521 1.27229 1.36559 1.43171 1.66018 1.78938 1.97760 2.53686 2.67902 2.71713 2.80040 2.97395 3.38954 3.45024 3.52829 3.56255 3.68639 3.69503 3.84604 3.95399 4.01310 4.08432 4.13824 4.25648 4.34644 4.41361 4.49561 4.57050 4.61060 4.64944 4.73958 4.84215 4.90158 4.98307 5.24809 5.36935 5.38021 5.45718 5.70128 6.25009 6.42258 6.75268 7.06539 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.796 3.204 4 C -0.085 4.085 5 C -0.156 4.156 6 C -0.070 4.070 7 C -0.201 4.201 8 C 0.114 3.886 9 O -0.325 6.325 10 C 0.037 3.963 11 C 0.517 3.483 12 O -0.570 6.570 13 N -0.692 5.692 14 C 0.123 3.877 15 H 0.094 0.906 16 C -0.121 4.121 17 C -0.156 4.156 18 H 0.161 0.839 19 C 0.453 3.547 20 F -0.189 7.189 21 F -0.193 7.193 22 F -0.191 7.191 23 C -0.142 4.142 24 C -0.152 4.152 25 H 0.396 0.604 26 H 0.099 0.901 27 H -0.281 1.281 28 H -0.302 1.302 29 H 0.151 0.849 30 H 0.164 0.836 31 H 0.163 0.837 32 H 0.129 0.871 33 H 0.128 0.872 34 H 0.424 0.576 35 H 0.113 0.887 36 H 0.106 0.894 37 H 0.101 0.899 38 H 0.090 0.910 39 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.830 5.337 7.547 10.429 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.701 3.299 4 C -0.086 4.086 5 C -0.173 4.173 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.069 3.931 9 O -0.238 6.238 10 C -0.040 4.040 11 C 0.303 3.697 12 O -0.448 6.448 13 N -0.346 5.346 14 C 0.018 3.982 15 H 0.113 0.887 16 C -0.159 4.159 17 C -0.175 4.175 18 H 0.179 0.821 19 C 0.400 3.600 20 F -0.170 7.170 21 F -0.175 7.175 22 F -0.172 7.172 23 C -0.181 4.181 24 C -0.171 4.171 25 H 0.246 0.754 26 H 0.117 0.883 27 H -0.208 1.208 28 H -0.231 1.231 29 H 0.168 0.832 30 H 0.182 0.818 31 H 0.181 0.819 32 H 0.147 0.853 33 H 0.145 0.855 34 H 0.263 0.737 35 H 0.132 0.868 36 H 0.125 0.875 37 H 0.119 0.881 38 H 0.109 0.891 39 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 4.835 5.094 5.827 9.126 hybrid contribution -0.032 -1.220 0.124 1.226 sum 4.804 3.874 5.950 8.573 Atomic orbital electron populations 1.86483 1.17375 1.82319 1.50449 1.25427 0.85316 1.11860 0.96909 0.93564 0.77716 0.74080 0.84588 1.20199 0.98284 0.93045 0.97054 1.21218 1.00638 1.00592 0.94884 1.21359 0.96721 0.93582 0.97130 1.21649 1.03392 0.96362 1.00552 1.19174 0.96301 0.82296 0.95299 1.86121 1.74621 1.20883 1.42188 1.22747 1.02714 0.89848 0.88721 1.20575 0.78598 0.88643 0.81842 1.90785 1.40675 1.75837 1.37467 1.45295 1.57509 1.08508 1.23306 1.21696 0.95794 0.80869 0.99881 0.88736 1.23342 0.99223 1.02073 0.91269 1.24219 1.01946 0.96119 0.95198 0.82139 1.20833 0.73408 0.85852 0.79947 1.93187 1.44207 1.91452 1.88179 1.93184 1.72033 1.91722 1.60524 1.93159 1.84860 1.62306 1.76888 1.23559 0.96450 1.04112 0.93936 1.20311 1.04452 0.94661 0.97700 0.75435 0.88341 1.20754 1.23092 0.83189 0.81816 0.81937 0.85312 0.85481 0.73699 0.86838 0.87513 0.88075 0.89144 0.87245 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.63 12.84 -148.98 -1.91 -3.54 16 2 C -0.09 -0.13 2.80 71.24 0.20 0.07 16 3 Si 0.80 -1.91 29.80 68.60 2.04 0.14 16 4 C -0.09 -0.14 5.35 -19.88 -0.11 -0.25 16 5 C -0.16 0.51 8.67 22.28 0.19 0.70 16 6 C -0.07 0.40 10.04 22.26 0.22 0.62 16 7 C -0.20 0.86 9.04 22.37 0.20 1.06 16 8 C 0.11 0.36 6.69 22.51 0.15 0.51 16 9 O -0.32 -1.79 9.67 -73.42 -0.71 -2.50 16 10 C 0.04 -0.20 5.22 71.24 0.37 0.17 16 11 C 0.52 0.07 7.91 87.66 0.69 0.77 16 12 O -0.57 -7.27 16.10 16.02 0.26 -7.01 16 13 N -0.69 5.56 5.27 -439.74 -2.32 3.24 16 14 C 0.12 -0.67 4.33 45.58 0.20 -0.48 16 15 H 0.09 0.01 7.47 -2.39 -0.02 -0.01 16 16 C -0.12 1.13 7.17 31.12 0.22 1.35 16 17 C -0.16 1.31 3.69 -10.27 -0.04 1.27 16 18 H 0.16 -2.23 8.14 -2.39 -0.02 -2.25 16 19 C 0.45 -0.76 3.02 71.98 0.22 -0.54 16 20 F -0.19 -0.07 17.18 44.97 0.77 0.70 16 21 F -0.19 -0.30 17.32 44.97 0.78 0.48 16 22 F -0.19 -0.28 15.75 44.97 0.71 0.43 16 23 C -0.14 0.80 7.32 31.18 0.23 1.03 16 24 C -0.15 -0.92 9.63 22.37 0.22 -0.71 16 25 H 0.40 -2.34 8.70 -74.06 -0.64 -2.98 16 26 H 0.10 0.38 7.96 -2.39 -0.02 0.36 16 27 H -0.28 -0.42 7.11 99.48 0.71 0.29 16 28 H -0.30 -1.67 7.11 99.48 0.71 -0.97 16 29 H 0.15 -1.23 4.90 -2.91 -0.01 -1.24 16 30 H 0.16 -1.98 8.06 -2.91 -0.02 -2.01 16 31 H 0.16 -1.91 6.30 -2.91 -0.02 -1.93 16 32 H 0.13 -1.57 7.66 -2.39 -0.02 -1.59 16 33 H 0.13 -1.52 7.66 -2.39 -0.02 -1.53 16 34 H 0.42 -6.94 8.70 -92.71 -0.81 -7.75 16 35 H 0.11 -1.47 8.14 -2.39 -0.02 -1.49 16 36 H 0.11 -0.84 7.88 -2.39 -0.02 -0.86 16 37 H 0.10 -0.37 7.13 -2.39 -0.02 -0.39 16 38 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 39 H 0.11 1.08 8.06 -2.91 -0.02 1.05 16 Total: 0.00 -28.61 343.92 2.31 -26.30 By element: Atomic # 1 Polarization: -23.54 SS G_CDS: -0.28 Total: -23.82 kcal Atomic # 6 Polarization: 2.61 SS G_CDS: 2.97 Total: 5.58 kcal Atomic # 7 Polarization: 5.56 SS G_CDS: -2.32 Total: 3.24 kcal Atomic # 8 Polarization: -10.69 SS G_CDS: -2.36 Total: -13.05 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 2.26 Total: 1.61 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: 2.04 Total: 0.14 kcal Total: -28.61 2.31 -26.30 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15744634_4860298.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -170.197 kcal (2) G-P(sol) polarization free energy of solvation -28.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -198.812 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.303 kcal (6) G-S(sol) free energy of system = (1) + (5) -196.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds