Wall clock time and date at job start Thu Mar 4 2021 13:17:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86292 * 1 3 3 C 1.86300 * 110.07622 * 2 1 4 4 C 1.87460 * 110.01601 * 238.60304 * 2 1 3 5 5 C 1.53648 * 107.32844 * 194.01751 * 4 2 1 6 6 C 1.52510 * 110.12207 * 60.33810 * 5 4 2 7 7 N 1.46342 * 111.68877 * 288.73562 * 6 5 4 8 8 C 1.34771 * 120.53422 * 251.16669 * 7 6 5 9 9 O 1.21693 * 120.00316 * 179.25765 * 8 7 6 10 10 C 1.46683 * 120.00012 * 359.25415 * 8 7 6 11 11 C 1.37866 * 126.23473 * 207.21285 * 10 8 7 12 12 C 1.39836 * 107.08225 * 179.84805 * 11 10 8 13 13 C 1.50703 * 126.06513 * 180.13662 * 12 11 10 14 14 O 1.42903 * 109.47231 * 300.29995 * 13 12 11 15 15 Si 1.86300 * 109.47017 * 180.30076 * 13 12 11 16 16 H 1.48504 * 109.46880 * 179.97438 * 15 13 12 17 17 H 1.48498 * 109.47207 * 299.99973 * 15 13 12 18 18 H 1.48496 * 109.47194 * 60.00312 * 15 13 12 19 19 C 1.35443 * 107.86840 * 0.41426 * 12 11 10 20 20 N 1.35533 * 108.87249 * 359.73986 * 19 12 11 21 21 C 1.47798 * 118.93593 * 70.89712 * 7 6 5 22 22 H 1.08996 * 109.47196 * 298.60181 * 1 2 3 23 23 H 1.09001 * 109.47132 * 58.60437 * 1 2 3 24 24 H 1.09000 * 109.47249 * 178.60270 * 1 2 3 25 25 H 1.09004 * 109.46943 * 181.39659 * 3 2 1 26 26 H 1.08993 * 109.47023 * 301.39268 * 3 2 1 27 27 H 1.08994 * 109.46851 * 61.39919 * 3 2 1 28 28 H 1.08999 * 109.88729 * 313.47602 * 4 2 1 29 29 H 1.09005 * 109.88827 * 74.48950 * 4 2 1 30 30 H 1.08995 * 109.36158 * 180.53950 * 5 4 2 31 31 H 1.09004 * 109.35849 * 300.14375 * 5 4 2 32 32 H 1.08998 * 109.03612 * 168.16549 * 6 5 4 33 33 H 1.09006 * 109.03328 * 49.30451 * 6 5 4 34 34 H 1.07998 * 126.45649 * 359.95664 * 11 10 8 35 35 H 1.09000 * 109.47249 * 60.30362 * 13 12 11 36 36 H 0.96698 * 113.99753 * 179.97438 * 14 13 12 37 37 H 1.08003 * 125.56916 * 179.70970 * 19 12 11 38 38 H 0.97001 * 125.68054 * 179.97438 * 20 19 12 39 39 H 1.09001 * 110.07937 * 64.45308 * 21 7 6 40 40 H 1.08991 * 110.07842 * 186.06171 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.5024 1.7498 0.0000 4 6 2.5046 -0.9176 -1.5035 5 6 3.9983 -1.1911 -1.2696 6 6 4.1861 -2.0448 -0.0199 7 7 3.9033 -1.2873 1.1999 8 6 4.9027 -0.9273 2.0294 9 8 4.6582 -0.2858 3.0343 10 6 6.2851 -1.3086 1.7211 11 6 7.3007 -1.4991 2.6337 12 6 8.4426 -1.8548 1.9092 13 6 9.7996 -2.1641 2.4873 14 8 10.2810 -1.0275 3.2073 15 14 10.9836 -2.5728 1.1083 16 1 12.3209 -2.8770 1.6779 17 1 10.4834 -3.7540 0.3601 18 1 11.0906 -1.4126 0.1876 19 6 8.1143 -1.8660 0.5952 20 7 6.8061 -1.5358 0.4674 21 6 2.5050 -0.9183 1.5046 22 1 -0.3633 0.4919 0.9022 23 1 -0.3633 0.5354 -0.8772 24 1 -0.3634 -1.0274 -0.0251 25 1 3.5921 1.7384 -0.0250 26 1 2.1244 2.2748 -0.8772 27 1 2.1651 2.2598 0.9022 28 1 1.9688 -1.8598 -1.6194 29 1 2.3739 -0.3049 -2.3955 30 1 4.4086 -1.7172 -2.1316 31 1 4.5235 -0.2444 -1.1428 32 1 5.2148 -2.4032 0.0146 33 1 3.5139 -2.9015 -0.0703 34 1 7.2277 -1.3951 3.7062 35 1 9.7211 -3.0158 3.1631 36 1 11.1518 -1.1556 3.6078 37 1 8.7856 -2.0993 -0.2181 38 1 6.3182 -1.4702 -0.3684 39 1 1.9104 -1.8153 1.6775 40 1 2.4712 -0.2708 2.3807 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_10543058.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:17:07 Heat of formation + Delta-G solvation = -43.239702 kcal Electronic energy + Delta-G solvation = -20766.199291 eV Core-core repulsion = 17705.800592 eV Total energy + Delta-G solvation = -3060.398699 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 282.131 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.63106 -40.20897 -37.70589 -37.47541 -33.54870 -32.79910 -30.86339 -29.55514 -28.56039 -28.27556 -26.92133 -26.09051 -23.38981 -22.55125 -20.97225 -20.45369 -18.84799 -18.35709 -17.49439 -16.92145 -16.58544 -15.89992 -15.64223 -15.31526 -14.97441 -14.82104 -14.66335 -14.34220 -14.26835 -14.23299 -14.03061 -13.82032 -13.62373 -13.38063 -13.29934 -13.27588 -13.12100 -12.45549 -12.40333 -12.35848 -12.12617 -11.85105 -11.61124 -11.04475 -10.90421 -10.63952 -10.28860 -9.79740 -9.46069 -9.12271 0.53665 1.19160 1.39146 1.44423 1.49110 1.59481 1.62720 1.69262 1.92815 1.97517 2.03180 2.35506 2.47646 3.45566 3.55393 3.64718 3.74285 3.95750 4.06550 4.13362 4.31139 4.35608 4.45195 4.51509 4.59153 4.61619 4.62489 4.67439 4.68584 4.70755 4.87040 4.91370 5.01040 5.12849 5.16331 5.32519 5.40678 5.47558 5.69452 5.88334 6.24584 6.35939 6.73828 7.18900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.446 4.446 2 Si 0.999 3.001 3 C -0.445 4.445 4 C -0.402 4.402 5 C -0.137 4.137 6 C 0.075 3.925 7 N -0.596 5.596 8 C 0.586 3.414 9 O -0.522 6.522 10 C -0.052 4.052 11 C -0.077 4.077 12 C -0.162 4.162 13 C -0.046 4.046 14 O -0.545 6.545 15 Si 0.942 3.058 16 H -0.255 1.255 17 H -0.251 1.251 18 H -0.249 1.249 19 C 0.019 3.981 20 N -0.539 5.539 21 C -0.181 4.181 22 H 0.073 0.927 23 H 0.073 0.927 24 H 0.071 0.929 25 H 0.067 0.933 26 H 0.070 0.930 27 H 0.072 0.928 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.081 0.919 31 H 0.068 0.932 32 H 0.090 0.910 33 H 0.085 0.915 34 H 0.150 0.850 35 H 0.073 0.927 36 H 0.377 0.623 37 H 0.170 0.830 38 H 0.422 0.578 39 H 0.077 0.923 40 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.177 -3.284 -5.185 6.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.194 2.806 3 C -0.553 4.553 4 C -0.488 4.488 5 C -0.176 4.176 6 C -0.049 4.049 7 N -0.330 5.330 8 C 0.375 3.625 9 O -0.397 6.397 10 C -0.164 4.164 11 C -0.103 4.103 12 C -0.169 4.169 13 C -0.158 4.158 14 O -0.350 6.350 15 Si 0.764 3.236 16 H -0.179 1.179 17 H -0.175 1.175 18 H -0.172 1.172 19 C -0.117 4.117 20 N -0.141 5.141 21 C -0.349 4.349 22 H 0.092 0.908 23 H 0.092 0.908 24 H 0.091 0.909 25 H 0.086 0.914 26 H 0.090 0.910 27 H 0.091 0.909 28 H 0.100 0.900 29 H 0.100 0.900 30 H 0.100 0.900 31 H 0.086 0.914 32 H 0.108 0.892 33 H 0.103 0.897 34 H 0.168 0.832 35 H 0.091 0.909 36 H 0.224 0.776 37 H 0.187 0.813 38 H 0.266 0.734 39 H 0.095 0.905 40 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -0.437 -2.872 -5.615 6.322 hybrid contribution 0.103 -0.235 0.063 0.265 sum -0.334 -3.107 -5.552 6.371 Atomic orbital electron populations 1.26033 1.19686 1.04787 1.04909 0.79779 0.67166 0.67539 0.66125 1.26065 1.06321 1.18250 1.04697 1.26183 0.99471 1.08625 1.14547 1.21678 0.97993 1.00608 0.97275 1.21983 1.03489 0.95236 0.84148 1.47748 1.06777 1.56002 1.22434 1.17164 0.82890 0.79384 0.83052 1.90852 1.83250 1.39102 1.26526 1.20358 0.94735 1.16488 0.84833 1.21142 0.89773 1.00159 0.99252 1.18727 0.94881 1.11067 0.92239 1.23995 0.97235 0.91530 1.02992 1.86540 1.38875 1.37341 1.72285 0.85866 0.78435 0.80586 0.78686 1.17861 1.17464 1.17223 1.21778 0.85843 1.06120 0.97979 1.42685 1.09834 1.53427 1.08179 1.26873 0.84395 1.07554 1.16057 0.90826 0.90829 0.90947 0.91428 0.91045 0.90881 0.90025 0.89999 0.90050 0.91356 0.89210 0.89688 0.83205 0.90947 0.77580 0.81260 0.73431 0.90487 0.87744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.04 8.65 101.05 0.87 1.91 16 2 Si 1.00 -2.82 11.99 -169.99 -2.04 -4.86 16 3 C -0.45 0.31 8.65 101.05 0.87 1.18 16 4 C -0.40 1.36 5.03 37.49 0.19 1.55 16 5 C -0.14 0.47 4.89 -26.65 -0.13 0.34 16 6 C 0.08 -0.17 5.17 -4.38 -0.02 -0.19 16 7 N -0.60 -0.46 2.63 -113.18 -0.30 -0.76 16 8 C 0.59 2.42 7.63 -12.85 -0.10 2.32 16 9 O -0.52 -4.12 16.42 5.19 0.09 -4.04 16 10 C -0.05 -0.15 6.38 -81.98 -0.52 -0.68 16 11 C -0.08 -0.29 10.69 -39.12 -0.42 -0.71 16 12 C -0.16 -0.33 5.47 -105.02 -0.57 -0.90 16 13 C -0.05 -0.01 3.01 36.01 0.11 0.10 16 14 O -0.55 -0.70 12.86 -35.23 -0.45 -1.15 16 15 Si 0.94 -0.95 25.87 -169.99 -4.40 -5.35 16 16 H -0.25 0.15 7.11 56.52 0.40 0.55 16 17 H -0.25 0.24 7.11 56.52 0.40 0.65 16 18 H -0.25 -0.06 7.11 56.52 0.40 0.34 16 19 C 0.02 0.00 10.45 -16.91 -0.18 -0.17 16 20 N -0.54 0.06 4.75 -9.39 -0.04 0.01 16 21 C -0.18 0.03 5.44 60.56 0.33 0.36 16 22 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 23 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 24 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 25 H 0.07 0.02 7.96 -51.93 -0.41 -0.39 16 26 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 27 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 28 H 0.08 -0.31 7.99 -51.93 -0.41 -0.73 16 29 H 0.08 -0.29 7.99 -51.93 -0.41 -0.70 16 30 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 31 H 0.07 -0.21 7.84 -51.93 -0.41 -0.62 16 32 H 0.09 -0.24 4.02 -51.93 -0.21 -0.45 16 33 H 0.08 -0.27 8.11 -51.93 -0.42 -0.69 16 34 H 0.15 0.62 8.06 -52.49 -0.42 0.20 16 35 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 36 H 0.38 -1.24 8.74 45.56 0.40 -0.85 16 37 H 0.17 -0.45 6.19 -52.48 -0.32 -0.77 16 38 H 0.42 -1.20 5.65 -40.82 -0.23 -1.43 16 39 H 0.08 -0.10 8.00 -51.93 -0.42 -0.51 16 40 H 0.10 0.17 6.90 -51.93 -0.36 -0.18 16 LS Contribution 320.64 15.07 4.83 4.83 Total: 0.00 -8.55 320.64 -7.21 -15.76 By element: Atomic # 1 Polarization: -4.23 SS G_CDS: -5.33 Total: -9.57 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 0.43 Total: 5.12 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.34 Total: -0.75 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -0.37 Total: -5.19 kcal Atomic # 14 Polarization: -3.77 SS G_CDS: -6.44 Total: -10.21 kcal Total LS contribution 4.83 Total: 4.83 kcal Total: -8.55 -7.21 -15.76 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_10543058.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.478 kcal (2) G-P(sol) polarization free energy of solvation -8.548 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.762 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds