Wall clock time and date at job start Thu Mar 4 2021 13:45:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86295 * 1 3 3 C 1.86303 * 110.07575 * 2 1 4 4 C 1.87461 * 110.01460 * 238.60706 * 2 1 3 5 5 C 1.53653 * 107.32567 * 194.01881 * 4 2 1 6 6 C 1.52012 * 110.16360 * 60.23662 * 5 4 2 7 7 N 1.46334 * 111.97305 * 288.87332 * 6 5 4 8 8 C 1.34774 * 120.53380 * 250.94381 * 7 6 5 9 9 O 1.21570 * 120.00454 * 185.39619 * 8 7 6 10 10 C 1.47695 * 120.00184 * 5.39699 * 8 7 6 11 11 C 1.39614 * 120.15687 * 53.91620 * 10 8 7 12 12 C 1.38115 * 119.85541 * 179.97438 * 11 10 8 13 13 F 1.35097 * 119.91842 * 179.97438 * 12 11 10 14 14 C 1.38612 * 120.16152 * 0.24993 * 12 11 10 15 15 C 1.50704 * 119.84049 * 179.74500 * 14 12 11 16 16 O 1.42895 * 109.47261 * 285.00432 * 15 14 12 17 17 Si 1.86294 * 109.47066 * 165.00126 * 15 14 12 18 18 H 1.48502 * 109.47113 * 60.00257 * 17 15 14 19 19 H 1.48500 * 109.47402 * 180.02562 * 17 15 14 20 20 H 1.48496 * 109.47228 * 300.00594 * 17 15 14 21 21 C 1.38224 * 120.31394 * 359.49532 * 14 12 11 22 22 C 1.38267 * 120.15122 * 0.50638 * 21 14 12 23 23 F 1.35095 * 120.08878 * 179.76802 * 22 21 14 24 24 C 1.47794 * 118.93255 * 70.67038 * 7 6 5 25 25 H 1.08997 * 109.47014 * 298.60808 * 1 2 3 26 26 H 1.09000 * 109.46876 * 58.60068 * 1 2 3 27 27 H 1.09003 * 109.47251 * 178.60071 * 1 2 3 28 28 H 1.09002 * 109.46930 * 181.39655 * 3 2 1 29 29 H 1.09002 * 109.47395 * 301.39698 * 3 2 1 30 30 H 1.08997 * 109.47025 * 61.39837 * 3 2 1 31 31 H 1.09004 * 109.88598 * 313.47261 * 4 2 1 32 32 H 1.09002 * 109.88629 * 74.56255 * 4 2 1 33 33 H 1.08999 * 109.36055 * 180.53988 * 5 4 2 34 34 H 1.08999 * 109.35606 * 300.13289 * 5 4 2 35 35 H 1.08998 * 108.86964 * 168.23655 * 6 5 4 36 36 H 1.08998 * 108.91352 * 49.54544 * 6 5 4 37 37 H 1.08005 * 120.07483 * 359.95684 * 11 10 8 38 38 H 1.09005 * 109.46665 * 45.00249 * 15 14 12 39 39 H 0.96695 * 114.00132 * 299.99777 * 16 15 14 40 40 H 1.08004 * 119.92654 * 180.25640 * 21 14 12 41 41 H 1.08996 * 110.07766 * 64.71109 * 24 7 6 42 42 H 1.09005 * 110.07937 * 186.31019 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5025 1.7498 0.0000 4 6 2.5046 -0.9175 -1.5036 5 6 3.9983 -1.1911 -1.2697 6 6 4.1867 -2.0399 -0.0228 7 7 3.9034 -1.2873 1.1998 8 6 4.9021 -0.9317 2.0319 9 8 4.6478 -0.3935 3.0919 10 6 6.3058 -1.1957 1.6560 11 6 6.8029 -0.7377 0.4344 12 6 8.1167 -0.9877 0.0894 13 9 8.5988 -0.5455 -1.0926 14 6 8.9401 -1.6960 0.9505 15 6 10.3709 -1.9697 0.5642 16 8 10.4085 -3.0002 -0.4250 17 14 11.3261 -2.5164 2.0672 18 1 10.7169 -3.7537 2.6179 19 1 12.7362 -2.7855 1.6868 20 1 11.2870 -1.4456 3.0952 21 6 8.4567 -2.1482 2.1639 22 6 7.1436 -1.9053 2.5224 23 9 6.6711 -2.3519 3.7066 24 6 2.5050 -0.9183 1.5044 25 1 -0.3633 0.4921 0.9022 26 1 -0.3633 0.5354 -0.8772 27 1 -0.3634 -1.0274 -0.0251 28 1 3.5921 1.7384 -0.0250 29 1 2.1243 2.2749 -0.8772 30 1 2.1651 2.2599 0.9022 31 1 1.9688 -1.8597 -1.6195 32 1 2.3751 -0.3042 -2.3953 33 1 4.4086 -1.7171 -2.1317 34 1 4.5235 -0.2444 -1.1430 35 1 5.2165 -2.3956 0.0093 36 1 3.5170 -2.8983 -0.0752 37 1 6.1613 -0.1893 -0.2396 38 1 10.8181 -1.0615 0.1600 39 1 10.0262 -3.8392 -0.1337 40 1 9.1050 -2.6960 2.8318 41 1 1.9105 -1.8152 1.6773 42 1 2.4712 -0.2708 2.3807 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:45:11 Heat of formation + Delta-G solvation = -161.635907 kcal Electronic energy + Delta-G solvation = -27130.124310 eV Core-core repulsion = 23062.883386 eV Total energy + Delta-G solvation = -4067.240925 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 329.117 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.09812 -50.07173 -41.50729 -39.93911 -37.72500 -37.59777 -33.58109 -33.45592 -31.44046 -29.62632 -28.69344 -28.57591 -27.55485 -26.30891 -24.52424 -23.53764 -22.84167 -20.83636 -19.34044 -18.77845 -18.70337 -17.94143 -17.66099 -16.98806 -16.82844 -16.53103 -16.45462 -16.34455 -16.00347 -15.76437 -15.39749 -15.07553 -14.84120 -14.72022 -14.51771 -14.27877 -14.15569 -14.02611 -13.79845 -13.63888 -13.40360 -13.33587 -13.24513 -13.16433 -12.96784 -12.47188 -12.38657 -12.29138 -12.19538 -11.96796 -11.65521 -11.10554 -10.97908 -10.68709 -10.62466 -10.48897 -9.84713 -9.42323 -0.70649 -0.36509 0.90498 1.24037 1.28218 1.37696 1.48950 1.56542 1.67402 1.76031 1.85258 2.06418 2.37274 2.74589 2.84016 3.01422 3.18701 3.28807 3.43831 3.66743 3.69407 3.85399 4.06709 4.18295 4.27071 4.30517 4.38246 4.44726 4.51758 4.57783 4.60703 4.61785 4.63054 4.64599 4.65461 4.69020 4.75663 4.90432 4.99859 5.17250 5.28610 5.35763 5.39881 5.44735 6.15255 6.32200 6.98038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.997 3.003 3 C -0.445 4.445 4 C -0.403 4.403 5 C -0.130 4.130 6 C 0.091 3.909 7 N -0.587 5.587 8 C 0.558 3.442 9 O -0.514 6.514 10 C -0.127 4.127 11 C -0.100 4.100 12 C 0.119 3.881 13 F -0.118 7.118 14 C -0.109 4.109 15 C -0.084 4.084 16 O -0.528 6.528 17 Si 0.948 3.052 18 H -0.247 1.247 19 H -0.244 1.244 20 H -0.243 1.243 21 C -0.137 4.137 22 C 0.143 3.857 23 F -0.116 7.116 24 C -0.182 4.182 25 H 0.072 0.928 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.067 0.933 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.081 0.919 32 H 0.081 0.919 33 H 0.083 0.917 34 H 0.067 0.933 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.156 0.844 38 H 0.127 0.873 39 H 0.378 0.622 40 H 0.154 0.846 41 H 0.079 0.921 42 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.928 -1.920 -3.649 4.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.192 2.808 3 C -0.553 4.553 4 C -0.490 4.490 5 C -0.168 4.168 6 C -0.032 4.032 7 N -0.320 5.320 8 C 0.345 3.655 9 O -0.390 6.390 10 C -0.131 4.131 11 C -0.119 4.119 12 C 0.099 3.901 13 F -0.097 7.097 14 C -0.110 4.110 15 C -0.194 4.194 16 O -0.333 6.333 17 Si 0.768 3.232 18 H -0.171 1.171 19 H -0.167 1.167 20 H -0.166 1.166 21 C -0.156 4.156 22 C 0.123 3.877 23 F -0.094 7.094 24 C -0.349 4.349 25 H 0.091 0.909 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.086 0.914 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.101 0.899 34 H 0.085 0.915 35 H 0.104 0.896 36 H 0.101 0.899 37 H 0.174 0.826 38 H 0.144 0.856 39 H 0.225 0.775 40 H 0.171 0.829 41 H 0.097 0.903 42 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -0.312 -1.440 -2.662 3.043 hybrid contribution -0.545 -0.289 -0.056 0.619 sum -0.857 -1.728 -2.718 3.333 Atomic orbital electron populations 1.26030 1.19645 1.04821 1.04900 0.79814 0.67271 0.67545 0.66144 1.26063 1.06285 1.18205 1.04760 1.26217 0.99907 1.08546 1.14324 1.21545 0.97152 1.00601 0.97485 1.21578 1.03175 0.94869 0.83547 1.47759 1.06481 1.55524 1.22222 1.17955 0.84134 0.79533 0.83913 1.90852 1.83649 1.42233 1.22251 1.19804 0.95380 1.02747 0.95216 1.21296 0.94645 1.00305 0.95693 1.17179 0.91716 0.98103 0.83057 1.91586 1.88070 1.86924 1.43086 1.20419 0.98065 0.98803 0.93723 1.25054 0.94420 0.96263 1.03649 1.86603 1.84089 1.22816 1.39794 0.85696 0.80436 0.81580 0.75453 1.17056 1.16731 1.16606 1.20988 0.94502 1.02745 0.97356 1.17405 0.91645 0.96530 0.82126 1.91610 1.88486 1.86458 1.42826 1.26945 0.84164 1.07707 1.16126 0.90887 0.90776 0.90920 0.91411 0.90900 0.90944 0.90054 0.90010 0.89887 0.91475 0.89562 0.89883 0.82613 0.85553 0.77483 0.82904 0.90268 0.87856 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.17 8.65 101.05 0.87 2.04 16 2 Si 1.00 -3.23 11.99 -169.99 -2.04 -5.27 16 3 C -0.45 0.65 8.65 101.05 0.87 1.53 16 4 C -0.40 1.41 5.03 37.50 0.19 1.60 16 5 C -0.13 0.42 5.33 -26.89 -0.14 0.28 16 6 C 0.09 -0.21 5.00 -4.63 -0.02 -0.24 16 7 N -0.59 -0.13 2.64 -113.12 -0.30 -0.43 16 8 C 0.56 1.73 6.89 -12.40 -0.09 1.65 16 9 O -0.51 -3.62 16.31 5.30 0.09 -3.54 16 10 C -0.13 -0.17 4.55 -104.92 -0.48 -0.65 16 11 C -0.10 0.05 7.84 -39.11 -0.31 -0.25 16 12 C 0.12 -0.02 7.23 -39.49 -0.29 -0.30 16 13 F -0.12 -0.11 16.73 2.25 0.04 -0.07 16 14 C -0.11 0.08 5.27 -104.49 -0.55 -0.47 16 15 C -0.08 0.13 2.44 36.01 0.09 0.22 16 16 O -0.53 0.54 12.88 -35.23 -0.45 0.09 16 17 Si 0.95 -1.80 25.47 -169.99 -4.33 -6.13 16 18 H -0.25 0.56 6.73 56.52 0.38 0.94 16 19 H -0.24 0.12 7.11 56.52 0.40 0.52 16 20 H -0.24 0.25 7.11 56.52 0.40 0.65 16 21 C -0.14 0.07 8.62 -39.58 -0.34 -0.27 16 22 C 0.14 0.23 7.27 -38.97 -0.28 -0.05 16 23 F -0.12 -0.43 16.65 2.25 0.04 -0.39 16 24 C -0.18 0.13 5.42 60.56 0.33 0.46 16 25 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 26 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 27 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 28 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 30 H 0.07 -0.06 7.96 -51.93 -0.41 -0.47 16 31 H 0.08 -0.31 7.99 -51.93 -0.41 -0.73 16 32 H 0.08 -0.29 7.99 -51.93 -0.41 -0.70 16 33 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.07 -0.22 6.18 -51.93 -0.32 -0.54 16 35 H 0.09 -0.23 5.55 -51.93 -0.29 -0.52 16 36 H 0.08 -0.27 8.10 -51.93 -0.42 -0.69 16 37 H 0.16 -0.34 5.74 -52.48 -0.30 -0.64 16 38 H 0.13 -0.25 7.89 -51.93 -0.41 -0.66 16 39 H 0.38 -1.77 8.70 45.56 0.40 -1.37 16 40 H 0.15 -0.31 4.85 -52.48 -0.25 -0.56 16 41 H 0.08 -0.13 8.00 -51.93 -0.42 -0.55 16 42 H 0.10 0.11 6.94 -51.93 -0.36 -0.25 16 LS Contribution 345.67 15.07 5.21 5.21 Total: 0.00 -7.32 345.67 -6.82 -14.14 By element: Atomic # 1 Polarization: -4.22 SS G_CDS: -4.93 Total: -9.15 kcal Atomic # 6 Polarization: 5.68 SS G_CDS: -0.14 Total: 5.54 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.30 Total: -0.43 kcal Atomic # 8 Polarization: -3.08 SS G_CDS: -0.37 Total: -3.45 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.08 Total: -0.47 kcal Atomic # 14 Polarization: -5.03 SS G_CDS: -6.37 Total: -11.40 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -7.32 -6.82 -14.14 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.494 kcal (2) G-P(sol) polarization free energy of solvation -7.325 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.142 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds