Wall clock time and date at job start Thu Mar 4 2021 13:51:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86302 * 109.99803 * 2 1 4 4 C 1.87462 * 110.01799 * 121.35003 * 2 1 3 5 5 C 1.53647 * 107.32485 * 165.98122 * 4 2 1 6 6 C 1.52505 * 110.12376 * 299.66051 * 5 4 2 7 7 N 1.46335 * 111.69171 * 71.26695 * 6 5 4 8 8 C 1.34781 * 120.53450 * 109.10858 * 7 6 5 9 9 O 1.21279 * 120.00156 * 179.97438 * 8 7 6 10 10 C 1.50699 * 119.99628 * 0.02562 * 8 7 6 11 11 N 1.46502 * 109.46732 * 180.02562 * 10 8 7 12 12 C 1.35040 * 125.92731 * 124.98502 * 11 10 8 13 13 C 1.35084 * 107.97818 * 180.02562 * 12 11 10 14 14 C 1.50698 * 126.07717 * 179.97438 * 13 12 11 15 15 O 1.42896 * 109.47256 * 105.16443 * 14 13 12 16 16 Si 1.86306 * 109.47126 * 345.16270 * 14 13 12 17 17 H 1.48504 * 109.46710 * 60.00012 * 16 14 13 18 18 H 1.48499 * 109.47237 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46962 * 300.00217 * 16 14 13 20 20 C 1.40848 * 107.85009 * 0.02562 * 13 12 11 21 21 C 1.48419 * 126.03915 * 180.02562 * 20 13 12 22 22 C 1.39315 * 120.12121 * 317.19786 * 21 20 13 23 23 C 1.38023 * 119.87904 * 179.72331 * 22 21 20 24 24 C 1.38328 * 120.11731 * 0.57220 * 23 22 21 25 25 C 1.38313 * 120.24032 * 359.69786 * 24 23 22 26 26 C 1.38027 * 120.12271 * 0.02562 * 25 24 23 27 27 N 1.31627 * 107.92222 * 0.02562 * 20 13 12 28 28 C 1.47791 * 118.93671 * 289.38334 * 7 6 5 29 29 H 1.09003 * 109.46692 * 298.65659 * 1 2 3 30 30 H 1.08998 * 109.47251 * 58.65095 * 1 2 3 31 31 H 1.08995 * 109.46885 * 178.65529 * 1 2 3 32 32 H 1.08998 * 109.47124 * 181.34548 * 3 2 1 33 33 H 1.08997 * 109.47086 * 301.34865 * 3 2 1 34 34 H 1.09008 * 109.47047 * 61.34947 * 3 2 1 35 35 H 1.08996 * 109.88419 * 46.52370 * 4 2 1 36 36 H 1.09004 * 109.94566 * 285.47145 * 4 2 1 37 37 H 1.09000 * 109.35999 * 179.45757 * 5 4 2 38 38 H 1.09001 * 109.36138 * 59.86173 * 5 4 2 39 39 H 1.09003 * 109.03828 * 310.69854 * 6 5 4 40 40 H 1.08994 * 108.97942 * 191.79687 * 6 5 4 41 41 H 1.08999 * 109.47077 * 60.00200 * 10 8 7 42 42 H 1.08999 * 109.47147 * 299.99708 * 10 8 7 43 43 H 1.08000 * 126.01484 * 359.97438 * 12 11 10 44 44 H 1.09005 * 109.47087 * 225.16472 * 14 13 12 45 45 H 0.96701 * 114.00250 * 299.99980 * 15 14 13 46 46 H 1.07999 * 120.06029 * 359.97438 * 22 21 20 47 47 H 1.07999 * 119.94155 * 180.31678 * 23 22 21 48 48 H 1.08001 * 119.87727 * 179.72369 * 24 23 22 49 49 H 1.07998 * 119.93871 * 180.02562 * 25 24 23 50 50 H 1.08000 * 120.06319 * 180.02562 * 26 25 24 51 51 H 1.08996 * 110.08139 * 173.66094 * 28 7 6 52 52 H 1.09007 * 110.07791 * 295.26909 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5001 1.7507 0.0000 4 6 2.5047 -0.9164 1.5042 5 6 3.9984 -1.1900 1.2705 6 6 4.1861 -2.0447 0.0214 7 7 3.9033 -1.2883 -1.1990 8 6 4.9021 -0.9338 -2.0317 9 8 4.6567 -0.3074 -3.0408 10 6 6.3235 -1.3167 -1.7094 11 7 7.2138 -0.8181 -2.7606 12 6 8.2920 -0.0262 -2.5761 13 6 8.8455 0.2129 -3.7849 14 6 10.0692 1.0513 -4.0504 15 8 11.1770 0.1977 -4.3438 16 14 10.4576 2.0776 -2.5447 17 1 10.7125 1.1821 -1.3878 18 1 11.6638 2.9033 -2.8062 19 1 9.3063 2.9646 -2.2399 20 6 8.0749 -0.4597 -4.7532 21 6 8.3256 -0.4695 -6.2160 22 6 8.6784 0.7075 -6.8727 23 6 8.9160 0.6916 -8.2323 24 6 8.7927 -0.4877 -8.9447 25 6 8.4372 -1.6579 -8.2987 26 6 8.2029 -1.6545 -6.9384 27 7 7.0933 -1.0782 -4.1316 28 6 2.5058 -0.9142 -1.5007 29 1 -0.3633 0.4929 0.9018 30 1 -0.3633 0.5346 -0.8776 31 1 -0.3633 -1.0273 -0.0241 32 1 3.5898 1.7408 -0.0241 33 1 2.1220 2.2749 -0.8776 34 1 2.1613 2.2606 0.9019 35 1 1.9690 -1.8584 1.6209 36 1 2.3752 -0.3035 2.3963 37 1 4.4088 -1.7153 2.1329 38 1 4.5236 -0.2434 1.1429 39 1 3.5140 -2.9014 0.0725 40 1 5.2152 -2.4020 -0.0122 41 1 6.4028 -2.4022 -1.6502 42 1 6.6099 -0.8788 -0.7532 43 1 8.6486 0.3505 -1.6288 44 1 9.8821 1.7086 -4.8997 45 1 11.4007 -0.4156 -3.6304 46 1 8.7699 1.6298 -6.3183 47 1 9.1945 1.6023 -8.7415 48 1 8.9751 -0.4948 -10.0092 49 1 8.3428 -2.5760 -8.8596 50 1 7.9258 -2.5689 -6.4349 51 1 2.4728 -0.2642 -2.3750 52 1 1.9082 -1.8089 -1.6753 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_12622748.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:51:41 Heat of formation + Delta-G solvation = 9.331093 kcal Electronic energy + Delta-G solvation = -32096.612211 eV Core-core repulsion = 27993.549822 eV Total energy + Delta-G solvation = -4103.062388 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 373.173 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.42301 -40.85873 -39.58771 -37.69886 -37.47443 -34.73395 -33.54274 -32.26609 -31.84052 -31.29685 -29.77597 -29.18118 -28.58911 -27.66650 -26.57857 -25.67089 -23.84620 -23.24375 -22.90012 -21.58178 -21.04424 -20.15136 -18.72944 -18.40967 -17.56015 -17.48285 -16.76706 -16.72122 -16.33623 -16.05201 -15.79053 -15.62939 -15.45863 -15.35832 -15.03132 -14.66352 -14.60643 -14.31697 -14.25803 -14.15256 -14.13318 -14.01436 -13.90262 -13.69043 -13.53782 -13.40760 -13.31495 -13.22390 -13.10715 -12.46357 -12.42593 -12.35179 -12.27624 -12.18786 -11.94253 -11.66617 -11.62502 -11.51026 -11.09515 -10.99896 -10.63409 -10.47548 -10.16203 -9.64697 -9.63555 -9.41662 -9.14569 0.33434 0.69924 0.82946 1.17706 1.25330 1.36036 1.40796 1.53268 1.56226 1.60177 1.68158 1.87789 1.94434 2.00623 2.37065 3.08535 3.16112 3.38695 3.56615 3.60698 3.66803 3.73890 3.78459 3.84809 4.12862 4.15329 4.21314 4.26639 4.33488 4.38216 4.43261 4.51172 4.51579 4.59129 4.60324 4.62177 4.63893 4.66413 4.69313 4.72545 4.89269 4.90748 4.94334 4.96219 5.14322 5.16042 5.28109 5.30671 5.38115 5.43269 5.46362 5.76079 5.79263 5.81423 5.86583 6.20101 6.22953 6.70870 6.74900 7.07489 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.001 2.999 3 C -0.445 4.445 4 C -0.404 4.404 5 C -0.128 4.128 6 C 0.094 3.906 7 N -0.597 5.597 8 C 0.496 3.504 9 O -0.503 6.503 10 C 0.115 3.885 11 N -0.357 5.357 12 C 0.054 3.946 13 C -0.249 4.249 14 C -0.041 4.041 15 O -0.536 6.536 16 Si 0.940 3.060 17 H -0.252 1.252 18 H -0.249 1.249 19 H -0.250 1.250 20 C 0.133 3.867 21 C -0.006 4.006 22 C -0.092 4.092 23 C -0.119 4.119 24 C -0.113 4.113 25 C -0.121 4.121 26 C -0.092 4.092 27 N -0.246 5.246 28 C -0.181 4.181 29 H 0.073 0.927 30 H 0.072 0.928 31 H 0.071 0.929 32 H 0.066 0.934 33 H 0.070 0.930 34 H 0.071 0.929 35 H 0.080 0.920 36 H 0.080 0.920 37 H 0.080 0.920 38 H 0.067 0.933 39 H 0.082 0.918 40 H 0.083 0.917 41 H 0.117 0.883 42 H 0.126 0.874 43 H 0.175 0.825 44 H 0.114 0.886 45 H 0.372 0.628 46 H 0.124 0.876 47 H 0.126 0.874 48 H 0.123 0.877 49 H 0.124 0.876 50 H 0.122 0.878 51 H 0.101 0.899 52 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.617 -1.435 6.976 7.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.196 2.804 3 C -0.553 4.553 4 C -0.490 4.490 5 C -0.167 4.167 6 C -0.029 4.029 7 N -0.332 5.332 8 C 0.282 3.718 9 O -0.376 6.376 10 C -0.010 4.010 11 N -0.139 5.139 12 C -0.090 4.090 13 C -0.261 4.261 14 C -0.153 4.153 15 O -0.340 6.340 16 Si 0.763 3.237 17 H -0.176 1.176 18 H -0.172 1.172 19 H -0.173 1.173 20 C -0.033 4.033 21 C -0.008 4.008 22 C -0.111 4.111 23 C -0.137 4.137 24 C -0.132 4.132 25 C -0.139 4.139 26 C -0.111 4.111 27 N -0.067 5.067 28 C -0.349 4.349 29 H 0.092 0.908 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.085 0.915 33 H 0.089 0.911 34 H 0.090 0.910 35 H 0.099 0.901 36 H 0.099 0.901 37 H 0.099 0.901 38 H 0.086 0.914 39 H 0.100 0.900 40 H 0.101 0.899 41 H 0.135 0.865 42 H 0.144 0.856 43 H 0.192 0.808 44 H 0.132 0.868 45 H 0.218 0.782 46 H 0.142 0.858 47 H 0.144 0.856 48 H 0.141 0.859 49 H 0.142 0.858 50 H 0.140 0.860 51 H 0.120 0.880 52 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.690 -1.077 6.602 6.900 hybrid contribution 0.431 -0.225 0.475 0.679 sum -1.259 -1.302 7.077 7.305 Atomic orbital electron populations 1.26050 1.19837 1.04785 1.04867 0.79712 0.67117 0.67455 0.66144 1.26067 1.06213 1.18371 1.04610 1.26208 1.00035 1.08505 1.14298 1.21564 0.97134 1.00664 0.97307 1.21623 1.02568 0.94860 0.83854 1.47826 1.06609 1.56359 1.22427 1.20502 0.86700 0.80783 0.83861 1.90810 1.83311 1.38419 1.25051 1.21607 0.87990 1.02275 0.89122 1.47883 1.21234 1.39239 1.05546 1.22249 0.90424 0.96577 0.99788 1.20438 1.03775 1.10244 0.91653 1.24322 0.83857 0.96416 1.10717 1.86540 1.48320 1.53532 1.45573 0.85906 0.81648 0.79765 0.76430 1.17611 1.17196 1.17340 1.20589 0.92733 0.96624 0.93376 1.17685 1.01035 0.94180 0.87920 1.21105 0.98406 0.97123 0.94495 1.21071 1.00372 0.98413 0.93866 1.21247 0.99093 0.92796 1.00044 1.21088 1.00057 0.98476 0.94291 1.21161 0.98522 0.97322 0.94087 1.77817 1.20136 1.22817 0.85881 1.26805 0.84549 1.07514 1.16073 0.90815 0.90923 0.90952 0.91502 0.91050 0.91033 0.90138 0.90130 0.90147 0.91392 0.89959 0.89895 0.86491 0.85622 0.80848 0.86818 0.78161 0.85775 0.85617 0.85894 0.85784 0.85967 0.88029 0.90568 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.08 8.65 101.05 0.87 1.96 16 2 Si 1.00 -3.24 11.97 -169.99 -2.03 -5.27 16 3 C -0.44 0.54 8.65 101.05 0.87 1.42 16 4 C -0.40 1.57 5.02 37.49 0.19 1.75 16 5 C -0.13 0.56 5.68 -26.65 -0.15 0.41 16 6 C 0.09 -0.38 5.68 -4.38 -0.02 -0.40 16 7 N -0.60 0.46 2.64 -111.75 -0.29 0.16 16 8 C 0.50 1.00 7.73 -10.98 -0.08 0.92 16 9 O -0.50 -3.57 15.13 5.56 0.08 -3.49 16 10 C 0.12 -0.11 5.34 -5.19 -0.03 -0.14 16 11 N -0.36 -0.94 3.40 -62.58 -0.21 -1.16 16 12 C 0.05 0.06 9.96 -17.26 -0.17 -0.11 16 13 C -0.25 -0.64 5.35 -104.76 -0.56 -1.20 16 14 C -0.04 -0.04 2.51 36.00 0.09 0.05 16 15 O -0.54 -0.82 12.88 -35.23 -0.45 -1.27 16 16 Si 0.94 -0.39 26.06 -169.99 -4.43 -4.82 16 17 H -0.25 0.34 7.03 56.52 0.40 0.73 16 18 H -0.25 -0.24 7.11 56.52 0.40 0.17 16 19 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 20 C 0.13 0.67 6.67 -82.77 -0.55 0.12 16 21 C -0.01 -0.03 5.74 -104.90 -0.60 -0.63 16 22 C -0.09 -0.32 8.89 -39.26 -0.35 -0.67 16 23 C -0.12 -0.29 10.03 -39.63 -0.40 -0.69 16 24 C -0.11 -0.26 10.04 -39.52 -0.40 -0.66 16 25 C -0.12 -0.34 10.03 -39.63 -0.40 -0.74 16 26 C -0.09 -0.39 9.78 -39.25 -0.38 -0.77 16 27 N -0.25 -1.47 11.66 33.43 0.39 -1.08 16 28 C -0.18 0.13 5.41 60.55 0.33 0.46 16 29 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 32 H 0.07 -0.03 7.96 -51.93 -0.41 -0.45 16 33 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16 34 H 0.07 -0.12 7.96 -51.92 -0.41 -0.53 16 35 H 0.08 -0.34 7.99 -51.93 -0.41 -0.75 16 36 H 0.08 -0.31 7.99 -51.93 -0.41 -0.72 16 37 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 38 H 0.07 -0.28 7.90 -51.93 -0.41 -0.69 16 39 H 0.08 -0.38 8.11 -51.93 -0.42 -0.80 16 40 H 0.08 -0.50 5.92 -51.93 -0.31 -0.81 16 41 H 0.12 -0.36 7.59 -51.93 -0.39 -0.75 16 42 H 0.13 -0.63 7.94 -51.93 -0.41 -1.04 16 43 H 0.17 -0.43 6.35 -52.49 -0.33 -0.76 16 44 H 0.11 0.09 5.55 -51.93 -0.29 -0.20 16 45 H 0.37 -0.69 8.70 45.56 0.40 -0.29 16 46 H 0.12 0.25 6.20 -52.49 -0.33 -0.08 16 47 H 0.13 0.03 8.06 -52.49 -0.42 -0.39 16 48 H 0.12 0.02 8.06 -52.49 -0.42 -0.40 16 49 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 50 H 0.12 0.47 8.06 -52.49 -0.42 0.04 16 51 H 0.10 0.17 6.90 -51.93 -0.36 -0.19 16 52 H 0.08 -0.11 7.99 -51.92 -0.41 -0.53 16 LS Contribution 419.46 15.07 6.32 6.32 Total: 0.00 -11.17 419.46 -9.87 -21.05 By element: Atomic # 1 Polarization: -4.01 SS G_CDS: -7.49 Total: -11.50 kcal Atomic # 6 Polarization: 2.81 SS G_CDS: -1.75 Total: 1.06 kcal Atomic # 7 Polarization: -1.96 SS G_CDS: -0.12 Total: -2.07 kcal Atomic # 8 Polarization: -4.39 SS G_CDS: -0.37 Total: -4.76 kcal Atomic # 14 Polarization: -3.62 SS G_CDS: -6.47 Total: -10.09 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -11.17 -9.87 -21.05 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12622748.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.376 kcal (2) G-P(sol) polarization free energy of solvation -11.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.202 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.045 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds