Wall clock time and date at job start Thu Mar 4 2021 13:52:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39287 * 121.02951 * 2 1 4 4 C 1.46493 * 134.19881 * 359.90842 * 3 2 1 5 5 C 1.50700 * 126.59951 * 0.31062 * 4 3 2 6 6 O 1.42897 * 109.47451 * 285.00581 * 5 4 3 7 7 Si 1.86298 * 109.47212 * 165.00252 * 5 4 3 8 8 H 1.48499 * 109.47189 * 60.00364 * 7 5 4 9 9 H 1.48502 * 109.47182 * 180.02562 * 7 5 4 10 10 H 1.48502 * 109.47151 * 300.00434 * 7 5 4 11 11 C 1.34184 * 106.80306 * 180.33978 * 4 3 2 12 12 N 1.36944 * 109.94878 * 359.97438 * 11 4 3 13 13 C 1.37153 * 110.11655 * 359.97438 * 12 11 4 14 14 N 1.32821 * 132.96748 * 179.97438 * 13 12 11 15 15 C 1.31308 * 121.88940 * 180.02562 * 14 13 12 16 16 C 1.39750 * 121.03576 * 179.73404 * 2 1 3 17 17 C 1.47670 * 120.44977 * 359.97438 * 16 2 1 18 18 O 1.21581 * 119.99723 * 305.64075 * 17 16 2 19 19 N 1.34776 * 120.00135 * 125.64370 * 17 16 2 20 20 C 1.46335 * 120.53171 * 354.38413 * 19 17 16 21 21 C 1.52506 * 111.63575 * 109.11978 * 20 19 17 22 22 C 1.53514 * 110.19077 * 71.31244 * 21 20 19 23 23 Si 1.87460 * 107.28198 * 299.60033 * 22 21 20 24 24 C 1.86297 * 110.01461 * 287.42158 * 23 22 21 25 25 C 1.86298 * 110.01896 * 165.98665 * 23 22 21 26 26 C 1.47788 * 120.53411 * 174.36108 * 19 17 16 27 27 H 1.09003 * 109.47183 * 275.31175 * 1 2 3 28 28 H 1.09000 * 109.47617 * 35.30855 * 1 2 3 29 29 H 1.09000 * 109.47494 * 155.31141 * 1 2 3 30 30 H 1.09004 * 109.46997 * 45.00484 * 5 4 3 31 31 H 0.96705 * 114.00148 * 299.99530 * 6 5 4 32 32 H 1.08003 * 125.01892 * 179.97438 * 11 4 3 33 33 H 0.97006 * 124.93506 * 180.02562 * 12 11 4 34 34 H 1.08006 * 119.31190 * 180.02562 * 15 14 13 35 35 H 1.08995 * 109.03680 * 229.65766 * 20 19 17 36 36 H 1.09002 * 109.03626 * 348.59252 * 20 19 17 37 37 H 1.08995 * 109.36456 * 191.43206 * 21 20 19 38 38 H 1.09008 * 109.36231 * 311.03118 * 21 20 19 39 39 H 1.09004 * 109.90750 * 180.16402 * 22 21 20 40 40 H 1.09005 * 109.97353 * 59.07713 * 22 21 20 41 41 H 1.09003 * 109.47285 * 177.20372 * 24 23 22 42 42 H 1.08999 * 109.46769 * 297.20485 * 24 23 22 43 43 H 1.09003 * 109.47007 * 57.20298 * 24 23 22 44 44 H 1.09005 * 109.47043 * 302.79093 * 25 23 22 45 45 H 1.09000 * 109.46866 * 62.78902 * 25 23 22 46 46 H 1.08997 * 109.47354 * 182.79452 * 25 23 22 47 47 H 1.09004 * 110.07742 * 353.96055 * 26 19 17 48 48 H 1.08996 * 110.07915 * 115.56470 * 26 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1936 0.0000 4 6 1.8515 2.6101 -0.0017 5 6 0.4525 3.1704 0.0025 6 8 -0.1245 3.0209 -1.2962 7 14 0.5086 4.9773 0.4528 8 1 1.3323 5.7100 -0.5421 9 1 -0.8700 5.5293 0.4575 10 1 1.1082 5.1327 1.8025 11 6 2.9946 3.3127 -0.0083 12 7 4.0667 2.4606 -0.0104 13 6 3.6347 1.1589 -0.0045 14 7 4.2720 -0.0064 -0.0042 15 6 3.6266 -1.1500 0.0018 16 6 2.2275 -1.1974 0.0056 17 6 1.5225 -2.4950 0.0122 18 8 0.6936 -2.7320 0.8694 19 7 1.7981 -3.4165 -0.9320 20 6 2.7016 -3.0996 -2.0387 21 6 4.0298 -3.8379 -1.9092 22 6 3.8336 -5.3345 -2.1887 23 14 2.6170 -5.9834 -0.9187 24 6 3.4331 -6.0837 0.7530 25 6 1.9975 -7.6645 -1.4297 26 6 1.1931 -4.7632 -0.8660 27 1 -0.3634 0.0951 1.0233 28 1 -0.3634 0.8386 -0.5939 29 1 -0.3634 -0.9337 -0.4292 30 1 -0.1521 2.6326 0.7328 31 1 0.3625 3.4748 -1.9976 32 1 3.0595 4.3907 -0.0115 33 1 4.9964 2.7375 -0.0147 34 1 4.1870 -2.0733 0.0022 35 1 2.2269 -3.3839 -2.9777 36 1 2.8909 -2.0262 -2.0470 37 1 4.7420 -3.4286 -2.6256 38 1 4.4195 -3.7062 -0.8997 39 1 4.7848 -5.8580 -2.0922 40 1 3.4327 -5.4764 -3.1924 41 1 2.7049 -6.4143 1.4936 42 1 4.2584 -6.7945 0.7123 43 1 3.8135 -5.1008 1.0311 44 1 1.5443 -7.5994 -2.4189 45 1 2.8313 -8.3659 -1.4575 46 1 1.2544 -8.0115 -0.7118 47 1 0.6361 -4.8780 0.0639 48 1 0.5343 -4.9198 -1.7201 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:52:32 Heat of formation + Delta-G solvation = -30.280762 kcal Electronic energy + Delta-G solvation = -29444.996072 eV Core-core repulsion = 25623.979744 eV Total energy + Delta-G solvation = -3821.016328 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 347.158 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.89072 -41.13478 -38.80143 -37.73515 -37.52824 -35.14368 -33.33915 -32.02194 -31.39818 -29.36482 -28.99799 -28.38499 -27.79455 -26.83866 -26.15512 -24.28583 -23.93080 -22.60395 -20.85459 -20.29503 -19.31426 -18.59913 -17.81019 -17.60620 -17.26946 -16.84112 -16.38266 -16.10552 -15.69548 -15.62416 -15.34811 -15.09128 -14.81917 -14.65375 -14.26144 -14.21336 -14.08255 -13.98487 -13.84646 -13.81099 -13.69878 -13.43095 -13.25950 -13.18495 -13.09431 -13.05540 -12.90538 -12.35778 -12.13446 -12.08634 -12.00836 -11.71146 -11.57882 -11.26200 -11.13505 -10.82071 -10.61439 -10.32822 -10.19702 -9.64012 -9.31014 -9.12467 -0.28156 -0.07271 1.23027 1.38836 1.48249 1.51596 1.59799 1.65965 1.70462 1.81475 1.91966 2.01485 2.18422 2.58106 2.63217 3.26496 3.42809 3.50582 3.58109 3.64545 3.74042 3.94940 4.10858 4.13913 4.19135 4.29033 4.42337 4.49284 4.53186 4.57355 4.62150 4.67356 4.75082 4.77460 4.77988 4.84768 4.86439 4.88659 4.94372 5.01233 5.06305 5.10135 5.22326 5.30458 5.31890 5.42947 5.51532 5.61574 5.65129 5.72219 6.19548 6.26904 6.80258 6.83468 7.05393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C 0.048 3.952 3 C -0.155 4.155 4 C -0.200 4.200 5 C -0.056 4.056 6 O -0.553 6.553 7 Si 0.991 3.009 8 H -0.228 1.228 9 H -0.278 1.278 10 H -0.259 1.259 11 C 0.083 3.917 12 N -0.561 5.561 13 C 0.283 3.717 14 N -0.510 5.510 15 C 0.173 3.827 16 C -0.228 4.228 17 C 0.565 3.435 18 O -0.574 6.574 19 N -0.585 5.585 20 C 0.091 3.909 21 C -0.129 4.129 22 C -0.402 4.402 23 Si 1.065 2.935 24 C -0.464 4.464 25 C -0.454 4.454 26 C -0.205 4.205 27 H 0.078 0.922 28 H 0.099 0.901 29 H 0.055 0.945 30 H 0.107 0.893 31 H 0.389 0.611 32 H 0.217 0.783 33 H 0.438 0.562 34 H 0.182 0.818 35 H 0.094 0.906 36 H 0.080 0.920 37 H 0.092 0.908 38 H 0.067 0.933 39 H 0.090 0.910 40 H 0.091 0.909 41 H 0.059 0.941 42 H 0.078 0.922 43 H 0.058 0.942 44 H 0.078 0.922 45 H 0.077 0.923 46 H 0.066 0.934 47 H 0.079 0.921 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.447 2.529 -4.923 7.100 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.040 3.960 3 C -0.162 4.162 4 C -0.208 4.208 5 C -0.166 4.166 6 O -0.361 6.361 7 Si 0.813 3.187 8 H -0.150 1.150 9 H -0.203 1.203 10 H -0.183 1.183 11 C -0.044 4.044 12 N -0.168 5.168 13 C 0.049 3.951 14 N -0.223 5.223 15 C 0.005 3.995 16 C -0.235 4.235 17 C 0.354 3.646 18 O -0.455 6.455 19 N -0.316 5.316 20 C -0.031 4.031 21 C -0.167 4.167 22 C -0.489 4.489 23 Si 1.256 2.744 24 C -0.570 4.570 25 C -0.562 4.562 26 C -0.370 4.370 27 H 0.097 0.903 28 H 0.118 0.882 29 H 0.074 0.926 30 H 0.125 0.875 31 H 0.238 0.762 32 H 0.233 0.767 33 H 0.279 0.721 34 H 0.198 0.802 35 H 0.112 0.888 36 H 0.098 0.902 37 H 0.110 0.890 38 H 0.085 0.915 39 H 0.108 0.892 40 H 0.110 0.890 41 H 0.079 0.921 42 H 0.097 0.903 43 H 0.077 0.923 44 H 0.097 0.903 45 H 0.096 0.904 46 H 0.085 0.915 47 H 0.097 0.903 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 4.621 3.118 -3.940 6.826 hybrid contribution -0.341 -0.257 0.061 0.431 sum 4.280 2.861 -3.880 6.447 Atomic orbital electron populations 1.20914 0.89464 1.03572 1.03359 1.19897 0.96823 0.89928 0.89391 1.19652 0.93120 0.94206 1.09212 1.20823 0.96407 0.90208 1.13333 1.24553 0.90168 1.12838 0.89002 1.86476 1.54344 1.78352 1.16893 0.85152 0.80378 0.72359 0.80845 1.15046 1.20264 1.18320 1.22310 0.84257 0.97157 1.00679 1.41557 1.10523 1.01704 1.63040 1.18734 0.89597 0.86720 1.00005 1.66517 1.40633 0.96330 1.18798 1.22852 0.89506 0.95092 0.92034 1.20490 0.95692 0.93381 1.13930 1.18199 0.81342 0.83554 0.81533 1.90757 1.35449 1.79771 1.39476 1.47901 1.45682 1.12644 1.25335 1.21792 0.90828 1.01152 0.89346 1.21611 0.96070 0.95910 1.03094 1.26170 1.11702 0.99433 1.11594 0.78812 0.64625 0.64562 0.66449 1.26327 1.07943 1.04107 1.18673 1.26124 1.06637 1.17311 1.06122 1.27363 1.12458 0.91770 1.05393 0.90314 0.88223 0.92563 0.87549 0.76175 0.76681 0.72143 0.80156 0.88810 0.90184 0.88989 0.91491 0.89159 0.88991 0.92137 0.90265 0.92255 0.90334 0.90356 0.91450 0.90273 0.89645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.97 8.60 71.24 0.61 -0.36 16 2 C 0.05 0.43 5.97 -19.25 -0.11 0.31 16 3 C -0.15 -0.99 6.17 -20.19 -0.12 -1.12 16 4 C -0.20 -0.09 5.58 -18.64 -0.10 -0.19 16 5 C -0.06 0.08 1.94 71.24 0.14 0.22 16 6 O -0.55 0.39 11.57 -148.98 -1.72 -1.34 16 7 Si 0.99 -4.67 26.09 68.60 1.79 -2.88 16 8 H -0.23 1.92 7.03 99.48 0.70 2.62 16 9 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 10 H -0.26 0.79 7.11 99.48 0.71 1.50 16 11 C 0.08 -0.37 10.44 82.97 0.87 0.49 16 12 N -0.56 1.12 6.04 -192.25 -1.16 -0.04 16 13 C 0.28 1.54 8.42 134.02 1.13 2.67 16 14 N -0.51 -3.49 10.37 -191.75 -1.99 -5.48 16 15 C 0.17 0.97 9.03 85.20 0.77 1.74 16 16 C -0.23 -1.95 4.54 -19.99 -0.09 -2.04 16 17 C 0.57 5.85 6.15 86.74 0.53 6.38 16 18 O -0.57 -10.36 15.54 -3.97 -0.06 -10.42 16 19 N -0.58 -2.10 2.63 -629.20 -1.65 -3.75 16 20 C 0.09 -0.18 5.04 86.25 0.44 0.25 16 21 C -0.13 0.67 5.33 30.60 0.16 0.84 16 22 C -0.40 2.81 5.03 72.15 0.36 3.17 16 23 Si 1.07 -5.47 11.99 68.60 0.82 -4.65 16 24 C -0.46 0.31 8.65 113.37 0.98 1.29 16 25 C -0.45 2.14 8.65 113.37 0.98 3.12 16 26 C -0.21 -0.28 5.42 127.52 0.69 0.41 16 27 H 0.08 0.68 8.14 -2.39 -0.02 0.67 16 28 H 0.10 0.65 5.60 -2.39 -0.01 0.63 16 29 H 0.06 0.61 6.72 -2.39 -0.02 0.59 16 30 H 0.11 0.00 7.33 -2.39 -0.02 -0.02 16 31 H 0.39 -3.10 8.70 -74.05 -0.64 -3.75 16 32 H 0.22 -2.70 6.31 -2.91 -0.02 -2.72 16 33 H 0.44 -3.26 8.96 -92.70 -0.83 -4.09 16 34 H 0.18 0.16 5.78 -2.91 -0.02 0.14 16 35 H 0.09 -0.45 8.11 -2.39 -0.02 -0.47 16 36 H 0.08 -0.04 5.58 -2.39 -0.01 -0.05 16 37 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 38 H 0.07 -0.32 6.20 -2.38 -0.01 -0.34 16 39 H 0.09 -0.72 7.99 -2.38 -0.02 -0.74 16 40 H 0.09 -0.79 7.99 -2.38 -0.02 -0.81 16 41 H 0.06 0.09 7.96 -2.39 -0.02 0.07 16 42 H 0.08 -0.19 7.96 -2.39 -0.02 -0.21 16 43 H 0.06 0.07 7.96 -2.39 -0.02 0.05 16 44 H 0.08 -0.44 7.96 -2.38 -0.02 -0.46 16 45 H 0.08 -0.41 7.96 -2.39 -0.02 -0.43 16 46 H 0.07 -0.23 7.96 -2.39 -0.02 -0.24 16 47 H 0.08 0.49 6.94 -2.39 -0.02 0.48 16 48 H 0.09 -0.09 8.00 -2.39 -0.02 -0.11 16 Total: 0.00 -22.58 374.67 3.54 -19.05 By element: Atomic # 1 Polarization: -7.96 SS G_CDS: 0.28 Total: -7.68 kcal Atomic # 6 Polarization: 9.96 SS G_CDS: 7.23 Total: 17.19 kcal Atomic # 7 Polarization: -4.47 SS G_CDS: -4.80 Total: -9.27 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -1.78 Total: -11.76 kcal Atomic # 14 Polarization: -10.14 SS G_CDS: 2.61 Total: -7.53 kcal Total: -22.58 3.54 -19.05 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.233 kcal (2) G-P(sol) polarization free energy of solvation -22.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.048 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds