Wall clock time and date at job start Thu Mar 4 2021 13:56:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86305 * 1 3 3 C 1.86298 * 110.07400 * 2 1 4 4 C 1.87465 * 110.01487 * 238.60364 * 2 1 3 5 5 C 1.53637 * 107.32200 * 194.01551 * 4 2 1 6 6 C 1.52502 * 110.12753 * 60.34306 * 5 4 2 7 7 N 1.46343 * 111.68888 * 288.73403 * 6 5 4 8 8 C 1.34771 * 120.52910 * 250.86870 * 7 6 5 9 9 O 1.21654 * 119.99871 * 179.68712 * 8 7 6 10 10 C 1.47065 * 120.00233 * 359.68722 * 8 7 6 11 11 C 1.35859 * 125.42534 * 208.12592 * 10 8 7 12 12 C 1.41591 * 107.72988 * 179.97438 * 11 10 8 13 13 C 1.40060 * 133.38552 * 180.02562 * 12 11 10 14 14 C 1.36477 * 119.83057 * 179.97438 * 13 12 11 15 15 C 1.38891 * 120.61591 * 0.04897 * 14 13 12 16 16 C 1.50705 * 119.67873 * 179.97438 * 15 14 13 17 17 O 1.42897 * 109.47175 * 119.97574 * 16 15 14 18 18 Si 1.86304 * 109.46557 * 359.97438 * 16 15 14 19 19 H 1.48506 * 109.46649 * 180.02562 * 18 16 15 20 20 H 1.48499 * 109.47240 * 299.99884 * 18 16 15 21 21 H 1.48496 * 109.47469 * 60.00413 * 18 16 15 22 22 C 1.37708 * 120.64924 * 359.95560 * 15 14 13 23 23 C 1.39182 * 119.80907 * 0.02562 * 22 15 14 24 24 N 1.37487 * 133.18871 * 180.32262 * 23 22 15 25 25 C 1.47785 * 118.93847 * 70.89063 * 7 6 5 26 26 H 1.08997 * 109.47066 * 298.60224 * 1 2 3 27 27 H 1.08994 * 109.47230 * 58.60379 * 1 2 3 28 28 H 1.09000 * 109.46642 * 178.60141 * 1 2 3 29 29 H 1.09003 * 109.46635 * 181.39348 * 3 2 1 30 30 H 1.08995 * 109.47322 * 301.39786 * 3 2 1 31 31 H 1.09001 * 109.46885 * 61.40218 * 3 2 1 32 32 H 1.09005 * 109.88090 * 74.56118 * 4 2 1 33 33 H 1.08996 * 109.88538 * 313.47278 * 4 2 1 34 34 H 1.09004 * 109.36688 * 300.13624 * 5 4 2 35 35 H 1.09002 * 109.35988 * 180.53852 * 5 4 2 36 36 H 1.09007 * 109.03391 * 49.29755 * 6 5 4 37 37 H 1.08999 * 109.03949 * 168.23414 * 6 5 4 38 38 H 1.07998 * 126.14000 * 359.97438 * 11 10 8 39 39 H 1.08000 * 120.09009 * 0.02562 * 13 12 11 40 40 H 1.08003 * 119.69256 * 180.02562 * 14 13 12 41 41 H 1.08994 * 109.47127 * 239.98479 * 16 15 14 42 42 H 0.96703 * 113.99792 * 180.02562 * 17 16 15 43 43 H 1.08008 * 120.09959 * 180.02562 * 22 15 14 44 44 H 0.97000 * 125.60557 * 359.96019 * 24 23 22 45 45 H 1.09001 * 110.08298 * 64.45404 * 25 7 6 46 46 H 1.08996 * 110.08662 * 186.06837 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.5025 1.7498 0.0000 4 6 2.5047 -0.9176 -1.5035 5 6 3.9983 -1.1910 -1.2696 6 6 4.1862 -2.0447 -0.0200 7 7 3.9034 -1.2873 1.1999 8 6 4.9021 -0.9324 2.0324 9 8 4.6567 -0.2980 3.0410 10 6 6.2885 -1.3122 1.7216 11 6 7.2722 -1.5183 2.6356 12 6 8.4499 -1.8661 1.9306 13 6 9.7531 -2.1851 2.3325 14 6 10.6983 -2.4855 1.3951 15 6 10.3811 -2.4772 0.0429 16 6 11.4416 -2.8117 -0.9744 17 8 11.0343 -3.9549 -1.7288 18 14 13.0447 -3.1829 -0.1009 19 1 14.0899 -3.5119 -1.1033 20 1 13.4680 -1.9949 0.6831 21 1 12.8545 -4.3373 0.8136 22 6 9.1071 -2.1668 -0.3775 23 6 8.1255 -1.8573 0.5595 24 7 6.7967 -1.5208 0.4541 25 6 2.5052 -0.9183 1.5045 26 1 -0.3633 0.4920 0.9022 27 1 -0.3633 0.5353 -0.8771 28 1 -0.3632 -1.0274 -0.0251 29 1 3.5922 1.7384 -0.0250 30 1 2.1244 2.2748 -0.8771 31 1 2.1652 2.2599 0.9023 32 1 2.3751 -0.3043 -2.3953 33 1 1.9690 -1.8598 -1.6194 34 1 4.5236 -0.2443 -1.1429 35 1 4.4087 -1.7171 -2.1316 36 1 3.5141 -2.9014 -0.0703 37 1 5.2153 -2.4020 0.0152 38 1 7.1738 -1.4324 3.7077 39 1 10.0092 -2.1942 3.3817 40 1 11.7024 -2.7315 1.7075 41 1 11.5814 -1.9643 -1.6455 42 1 11.6707 -4.2279 -2.4037 43 1 8.8701 -2.1634 -1.4312 44 1 6.2982 -1.4413 -0.3743 45 1 1.9105 -1.8153 1.6774 46 1 2.4713 -0.2708 2.3807 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_13158378.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:56:03 Heat of formation + Delta-G solvation = -27.138156 kcal Electronic energy + Delta-G solvation = -26523.181749 eV Core-core repulsion = 22923.265225 eV Total energy + Delta-G solvation = -3599.916524 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 332.147 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.80676 -40.62932 -38.81703 -37.71651 -36.97283 -33.60446 -33.29220 -31.37638 -30.45496 -29.57925 -28.58647 -28.40058 -27.31630 -25.94337 -24.10467 -23.04781 -22.35141 -21.86110 -20.61203 -18.82567 -18.51485 -18.19768 -17.33621 -17.07503 -16.68914 -16.23561 -15.83710 -15.62700 -15.35825 -15.13213 -14.91542 -14.70185 -14.59669 -14.35905 -14.30171 -14.11749 -14.03921 -13.92420 -13.68218 -13.45278 -13.40020 -13.28361 -13.16124 -12.75276 -12.51539 -12.40458 -12.15841 -12.12448 -11.91425 -11.66783 -11.64096 -11.11962 -10.98082 -10.85288 -10.65373 -10.35601 -9.49086 -9.21156 -8.72990 -0.22906 0.57944 1.03545 1.16434 1.40928 1.45080 1.52528 1.54874 1.65581 1.82647 1.90151 1.93240 2.29188 2.39221 2.80472 3.33810 3.39143 3.52970 3.65674 3.72609 3.89025 4.03458 4.07572 4.23579 4.27871 4.34277 4.41314 4.42517 4.50648 4.52336 4.59215 4.60449 4.60829 4.64844 4.65724 4.66973 4.86136 4.91131 4.96411 5.02301 5.11701 5.23745 5.37084 5.42640 5.44797 5.46756 5.60813 5.67772 6.03116 6.18579 6.32112 6.54747 7.03906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 1.000 3.000 3 C -0.445 4.445 4 C -0.402 4.402 5 C -0.136 4.136 6 C 0.071 3.929 7 N -0.592 5.592 8 C 0.580 3.420 9 O -0.517 6.517 10 C 0.019 3.981 11 C -0.106 4.106 12 C -0.113 4.113 13 C -0.051 4.051 14 C -0.151 4.151 15 C -0.046 4.046 16 C -0.082 4.082 17 O -0.545 6.545 18 Si 0.950 3.050 19 H -0.259 1.259 20 H -0.249 1.249 21 H -0.246 1.246 22 C -0.099 4.099 23 C 0.108 3.892 24 N -0.582 5.582 25 C -0.182 4.182 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.066 0.934 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.082 0.918 33 H 0.081 0.919 34 H 0.068 0.932 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.094 0.906 38 H 0.157 0.843 39 H 0.132 0.868 40 H 0.122 0.878 41 H 0.077 0.923 42 H 0.380 0.620 43 H 0.127 0.873 44 H 0.422 0.578 45 H 0.078 0.922 46 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.223 -0.964 -5.161 5.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.554 4.554 2 Si 1.195 2.805 3 C -0.553 4.553 4 C -0.489 4.489 5 C -0.175 4.175 6 C -0.052 4.052 7 N -0.325 5.325 8 C 0.367 3.633 9 O -0.392 6.392 10 C -0.090 4.090 11 C -0.133 4.133 12 C -0.118 4.118 13 C -0.069 4.069 14 C -0.170 4.170 15 C -0.047 4.047 16 C -0.192 4.192 17 O -0.351 6.351 18 Si 0.773 3.227 19 H -0.183 1.183 20 H -0.173 1.173 21 H -0.170 1.170 22 C -0.119 4.119 23 C -0.001 4.001 24 N -0.192 5.192 25 C -0.350 4.350 26 H 0.092 0.908 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.086 0.914 30 H 0.090 0.910 31 H 0.091 0.909 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.086 0.914 35 H 0.101 0.899 36 H 0.105 0.895 37 H 0.112 0.888 38 H 0.174 0.826 39 H 0.150 0.850 40 H 0.140 0.860 41 H 0.095 0.905 42 H 0.228 0.772 43 H 0.145 0.855 44 H 0.266 0.734 45 H 0.097 0.903 46 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -0.247 -0.733 -3.865 3.941 hybrid contribution -0.154 -0.015 -1.067 1.078 sum -0.401 -0.748 -4.931 5.004 Atomic orbital electron populations 1.26031 1.19619 1.04826 1.04934 0.79773 0.67222 0.67505 0.66029 1.26065 1.06299 1.18230 1.04740 1.26191 0.99451 1.08659 1.14558 1.21662 0.97980 1.00558 0.97271 1.22074 1.03877 0.95265 0.84021 1.47760 1.06843 1.55687 1.22204 1.17332 0.82956 0.79726 0.83256 1.90858 1.83088 1.39189 1.26067 1.20054 0.94365 1.10032 0.84509 1.20915 0.90005 1.02998 0.99391 1.18201 0.94669 1.06827 0.92098 1.20317 0.90466 0.96416 0.99747 1.20447 0.99776 1.04584 0.92180 1.18918 0.93575 0.99327 0.92907 1.24746 1.05689 0.91230 0.97514 1.86509 1.49201 1.46340 1.53021 0.85683 0.74857 0.81910 0.80269 1.18348 1.17267 1.16969 1.19804 0.90849 1.03157 0.98125 1.18368 0.84513 1.01831 0.95426 1.42759 1.08578 1.60266 1.07635 1.26917 0.84183 1.07687 1.16200 0.90822 0.90786 0.90918 0.91441 0.90982 0.90875 0.89940 0.89972 0.91365 0.89934 0.89528 0.88827 0.82567 0.85048 0.85995 0.90488 0.77243 0.85488 0.73420 0.90309 0.87674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.13 8.65 101.05 0.87 2.00 16 2 Si 1.00 -3.06 11.99 -169.99 -2.04 -5.09 16 3 C -0.45 0.46 8.65 101.05 0.87 1.34 16 4 C -0.40 1.37 5.03 37.49 0.19 1.56 16 5 C -0.14 0.44 4.85 -26.65 -0.13 0.31 16 6 C 0.07 -0.14 5.16 -4.38 -0.02 -0.17 16 7 N -0.59 -0.30 2.63 -113.05 -0.30 -0.60 16 8 C 0.58 2.03 7.63 -12.68 -0.10 1.94 16 9 O -0.52 -3.55 16.40 5.23 0.09 -3.46 16 10 C 0.02 0.05 6.29 -82.29 -0.52 -0.47 16 11 C -0.11 -0.33 10.64 -39.16 -0.42 -0.74 16 12 C -0.11 -0.32 6.16 -106.93 -0.66 -0.98 16 13 C -0.05 -0.09 10.06 -39.53 -0.40 -0.49 16 14 C -0.15 -0.23 8.59 -39.98 -0.34 -0.57 16 15 C -0.05 -0.07 5.43 -104.57 -0.57 -0.64 16 16 C -0.08 0.05 2.80 36.01 0.10 0.15 16 17 O -0.54 0.16 12.73 -35.23 -0.45 -0.29 16 18 Si 0.95 -0.69 25.03 -169.99 -4.26 -4.95 16 19 H -0.26 0.16 7.11 56.52 0.40 0.56 16 20 H -0.25 0.03 7.11 56.52 0.40 0.43 16 21 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 22 C -0.10 -0.15 9.61 -39.42 -0.38 -0.52 16 23 C 0.11 0.23 7.25 -83.98 -0.61 -0.38 16 24 N -0.58 -0.47 4.79 -7.36 -0.04 -0.51 16 25 C -0.18 0.10 5.44 60.55 0.33 0.43 16 26 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 28 H 0.07 -0.20 7.96 -51.93 -0.41 -0.61 16 29 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 31 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 32 H 0.08 -0.29 7.99 -51.93 -0.41 -0.71 16 33 H 0.08 -0.31 7.99 -51.93 -0.41 -0.73 16 34 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 35 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.09 -0.25 8.11 -51.92 -0.42 -0.67 16 37 H 0.09 -0.18 4.04 -51.93 -0.21 -0.39 16 38 H 0.16 0.34 8.06 -52.49 -0.42 -0.08 16 39 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 40 H 0.12 0.01 4.82 -52.48 -0.25 -0.24 16 41 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 42 H 0.38 -1.77 8.74 45.56 0.40 -1.37 16 43 H 0.13 -0.01 8.06 -52.48 -0.42 -0.44 16 44 H 0.42 -0.69 5.56 -40.82 -0.23 -0.91 16 45 H 0.08 -0.13 8.00 -51.93 -0.42 -0.54 16 46 H 0.10 0.11 6.90 -51.93 -0.36 -0.24 16 LS Contribution 365.12 15.07 5.50 5.50 Total: 0.00 -8.01 365.12 -9.36 -17.37 By element: Atomic # 1 Polarization: -4.65 SS G_CDS: -6.10 Total: -10.75 kcal Atomic # 6 Polarization: 4.55 SS G_CDS: -1.77 Total: 2.78 kcal Atomic # 7 Polarization: -0.78 SS G_CDS: -0.33 Total: -1.11 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.36 Total: -3.75 kcal Atomic # 14 Polarization: -3.75 SS G_CDS: -6.29 Total: -10.04 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.01 -9.36 -17.37 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_13158378.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.764 kcal (2) G-P(sol) polarization free energy of solvation -8.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.779 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.359 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.374 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.138 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds