Wall clock time and date at job start Thu Mar 4 2021 13:57:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37685 * 119.94980 * 2 1 4 4 C 1.39762 * 119.90618 * 180.02562 * 3 2 1 5 5 C 1.47607 * 120.08140 * 180.02562 * 4 3 2 6 6 O 1.21586 * 119.99727 * 137.72983 * 5 4 3 7 7 N 1.34769 * 120.00364 * 317.72620 * 5 4 3 8 8 C 1.46339 * 120.53221 * 354.44138 * 7 5 4 9 9 C 1.52502 * 111.69106 * 108.83383 * 8 7 5 10 10 C 1.53649 * 110.12415 * 71.26581 * 9 8 7 11 11 Si 1.87460 * 107.32400 * 299.66077 * 10 9 8 12 12 C 1.86301 * 110.01597 * 165.98338 * 11 10 9 13 13 C 1.86301 * 110.01381 * 287.41593 * 11 10 9 14 14 C 1.47796 * 120.53129 * 174.16334 * 7 5 4 15 15 C 1.39706 * 119.82672 * 0.27581 * 4 3 2 16 16 C 1.37728 * 119.90836 * 359.44202 * 15 4 3 17 17 C 1.50702 * 119.95449 * 180.25329 * 16 15 4 18 18 O 1.42897 * 109.46714 * 105.32794 * 17 16 15 19 19 Si 1.86297 * 109.47077 * 345.32787 * 17 16 15 20 20 H 1.48504 * 109.47383 * 59.99791 * 19 17 16 21 21 H 1.48499 * 109.47239 * 179.97438 * 19 17 16 22 22 H 1.48497 * 109.47379 * 299.99873 * 19 17 16 23 23 C 1.38972 * 120.08714 * 0.58357 * 16 15 4 24 24 O 1.35716 * 119.91104 * 179.69259 * 23 16 15 25 25 H 1.09004 * 109.46868 * 90.00616 * 1 2 3 26 26 H 1.09002 * 109.46626 * 209.99429 * 1 2 3 27 27 H 1.08996 * 109.47382 * 330.00438 * 1 2 3 28 28 H 1.07998 * 120.05036 * 359.97438 * 3 2 1 29 29 H 1.09000 * 109.03717 * 229.39724 * 8 7 5 30 30 H 1.08999 * 109.03758 * 348.26291 * 8 7 5 31 31 H 1.09003 * 109.36258 * 191.46488 * 9 8 7 32 32 H 1.08998 * 109.36436 * 311.06311 * 9 8 7 33 33 H 1.08998 * 109.88527 * 59.11603 * 10 9 8 34 34 H 1.09004 * 109.88247 * 180.20527 * 10 9 8 35 35 H 1.09007 * 109.46944 * 59.99800 * 12 11 10 36 36 H 1.08994 * 109.46961 * 180.02562 * 12 11 10 37 37 H 1.09003 * 109.47025 * 300.00280 * 12 11 10 38 38 H 1.08999 * 109.47004 * 60.00369 * 13 11 10 39 39 H 1.09004 * 109.46827 * 179.97438 * 13 11 10 40 40 H 1.09003 * 109.47131 * 299.99711 * 13 11 10 41 41 H 1.08995 * 110.08289 * 354.20671 * 14 7 5 42 42 H 1.09000 * 110.07759 * 115.81991 * 14 7 5 43 43 H 1.07996 * 120.04312 * 179.70891 * 15 4 3 44 44 H 1.09000 * 109.47350 * 225.32804 * 17 16 15 45 45 H 0.96706 * 113.99994 * 180.02562 * 18 17 16 46 46 H 0.96701 * 114.00106 * 269.97960 * 24 23 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1944 1.1930 0.0000 4 6 3.5920 1.1919 -0.0005 5 6 4.3329 2.4686 0.0000 6 8 5.3122 2.6029 0.7080 7 7 3.9238 3.4855 -0.7842 8 6 2.8223 3.2988 -1.7293 9 6 1.5656 4.0389 -1.2835 10 6 1.7595 5.5545 -1.4447 11 14 3.2100 6.0497 -0.3654 12 6 3.7825 7.7648 -0.8141 13 6 2.7183 5.9890 1.4306 14 6 4.5766 4.8087 -0.6992 15 6 4.2860 -0.0206 -0.0069 16 6 3.5910 -1.2096 -0.0010 17 6 4.3385 -2.5182 -0.0021 18 8 4.2720 -3.1057 1.2988 19 14 6.1197 -2.2154 -0.4566 20 1 6.7338 -1.2953 0.5341 21 1 6.8565 -3.5047 -0.4570 22 1 6.1888 -1.6048 -1.8084 23 6 2.2013 -1.2043 -0.0010 24 8 1.5200 -2.3781 -0.0015 25 1 -0.3633 -0.0001 -1.0277 26 1 -0.3633 -0.8901 0.5138 27 1 -0.3634 0.8900 0.5137 28 1 1.6544 2.1283 -0.0004 29 1 3.1261 3.6715 -2.7075 30 1 2.5989 2.2349 -1.8093 31 1 0.7209 3.7159 -1.8921 32 1 1.3632 3.8097 -0.2373 33 1 1.9745 5.7921 -2.4866 34 1 0.8606 6.0797 -1.1217 35 1 2.9661 8.4713 -0.6637 36 1 4.6257 8.0433 -0.1820 37 1 4.0909 7.7830 -1.8594 38 1 2.4089 4.9762 1.6885 39 1 3.5677 6.2778 2.0497 40 1 1.8910 6.6771 1.6042 41 1 5.2983 4.8182 0.1176 42 1 5.0725 5.0426 -1.6412 43 1 5.3659 -0.0255 -0.0121 44 1 3.8878 -3.1936 -0.7293 45 1 4.7334 -3.9525 1.3720 46 1 1.3223 -2.7178 -0.8850 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_13287732.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 13:57:30 Heat of formation + Delta-G solvation = -116.034468 kcal Electronic energy + Delta-G solvation = -26525.630906 eV Core-core repulsion = 22925.055548 eV Total energy + Delta-G solvation = -3600.575358 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 323.151 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.89639 -40.49825 -37.82235 -37.68689 -37.43887 -34.13892 -33.37229 -32.13157 -29.40273 -28.43158 -28.08765 -27.99117 -26.79407 -26.76720 -23.90012 -22.70807 -21.97336 -20.19501 -19.53045 -18.58002 -18.32959 -17.87419 -17.25604 -16.53765 -16.32369 -16.10079 -15.79202 -15.20833 -14.97811 -14.85407 -14.59246 -14.36885 -14.30511 -14.13953 -13.99453 -13.89078 -13.65489 -13.51745 -13.38527 -13.23387 -13.11896 -13.05432 -12.92803 -12.83603 -12.66096 -12.24224 -12.10703 -12.04779 -11.94219 -11.58860 -11.40949 -11.06084 -10.82467 -10.35928 -10.34677 -9.93036 -9.72610 -9.33001 -0.32287 0.02316 1.04540 1.32092 1.34467 1.42163 1.63024 1.75189 1.82188 1.88583 2.11936 2.37790 2.55509 3.10227 3.30570 3.36800 3.63968 3.79683 3.89979 3.99408 4.11470 4.14177 4.31180 4.36269 4.49691 4.50406 4.60259 4.65451 4.69622 4.73146 4.75493 4.81762 4.83897 4.85317 4.89717 4.94721 5.03855 5.05842 5.09608 5.20993 5.28174 5.33681 5.39257 5.48012 5.58497 5.61664 5.62438 6.21231 6.76251 6.82026 6.97078 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.115 4.115 3 C -0.069 4.069 4 C -0.147 4.147 5 C 0.546 3.454 6 O -0.587 6.587 7 N -0.584 5.584 8 C 0.079 3.921 9 C -0.132 4.132 10 C -0.397 4.397 11 Si 1.062 2.938 12 C -0.454 4.454 13 C -0.466 4.466 14 C -0.209 4.209 15 C -0.084 4.084 16 C -0.119 4.119 17 C -0.062 4.062 18 O -0.559 6.559 19 Si 0.955 3.045 20 H -0.289 1.289 21 H -0.240 1.240 22 H -0.255 1.255 23 C 0.159 3.841 24 O -0.490 6.490 25 H 0.096 0.904 26 H 0.071 0.929 27 H 0.080 0.920 28 H 0.163 0.837 29 H 0.096 0.904 30 H 0.096 0.904 31 H 0.105 0.895 32 H 0.067 0.933 33 H 0.094 0.906 34 H 0.093 0.907 35 H 0.079 0.921 36 H 0.064 0.936 37 H 0.078 0.922 38 H 0.056 0.944 39 H 0.057 0.943 40 H 0.080 0.920 41 H 0.073 0.927 42 H 0.086 0.914 43 H 0.116 0.884 44 H 0.107 0.893 45 H 0.397 0.603 46 H 0.413 0.587 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.134 0.282 -7.432 10.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.115 4.115 3 C -0.088 4.088 4 C -0.150 4.150 5 C 0.336 3.664 6 O -0.469 6.469 7 N -0.314 5.314 8 C -0.043 4.043 9 C -0.170 4.170 10 C -0.485 4.485 11 Si 1.253 2.747 12 C -0.562 4.562 13 C -0.572 4.572 14 C -0.374 4.374 15 C -0.103 4.103 16 C -0.120 4.120 17 C -0.173 4.173 18 O -0.368 6.368 19 Si 0.781 3.219 20 H -0.216 1.216 21 H -0.163 1.163 22 H -0.179 1.179 23 C 0.113 3.887 24 O -0.303 6.303 25 H 0.114 0.886 26 H 0.090 0.910 27 H 0.099 0.901 28 H 0.181 0.819 29 H 0.114 0.886 30 H 0.114 0.886 31 H 0.123 0.877 32 H 0.085 0.915 33 H 0.113 0.887 34 H 0.111 0.889 35 H 0.098 0.902 36 H 0.083 0.917 37 H 0.097 0.903 38 H 0.075 0.925 39 H 0.076 0.924 40 H 0.099 0.901 41 H 0.091 0.909 42 H 0.105 0.895 43 H 0.134 0.866 44 H 0.124 0.876 45 H 0.248 0.752 46 H 0.274 0.726 Dipole moment (debyes) X Y Z Total from point charges -6.025 1.040 -6.596 8.993 hybrid contribution 0.860 -0.679 0.072 1.098 sum -5.165 0.360 -6.524 8.329 Atomic orbital electron populations 1.20783 0.87650 1.04022 1.04216 1.20485 0.98601 0.91338 1.01110 1.21632 0.91283 0.99702 0.96135 1.19759 0.94920 0.92359 1.07934 1.18672 0.83312 0.84292 0.80122 1.90763 1.28825 1.83054 1.44283 1.47921 1.34522 1.10303 1.38667 1.22080 0.86313 1.03228 0.92670 1.21709 0.97265 0.95462 1.02580 1.26118 1.13540 0.98696 1.10126 0.78872 0.65423 0.64329 0.66120 1.26124 1.06297 1.17833 1.05944 1.26359 1.05666 1.03898 1.21283 1.27431 1.11288 0.92980 1.05660 1.20975 0.99674 0.91580 0.98098 1.19713 0.94040 0.93924 1.04281 1.24428 1.08941 0.94188 0.89719 1.86516 1.79476 1.41748 1.29051 0.85660 0.76170 0.80631 0.79418 1.21588 1.16308 1.17860 1.18318 0.88258 0.86097 0.96042 1.84747 1.75207 1.35251 1.35132 0.88559 0.90980 0.90146 0.81942 0.88565 0.88572 0.87687 0.91453 0.88687 0.88864 0.90160 0.91696 0.90250 0.92520 0.92417 0.90050 0.90864 0.89540 0.86635 0.87561 0.75221 0.72631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.62 9.78 71.24 0.70 1.32 16 2 C -0.11 0.00 5.89 -19.81 -0.12 -0.11 16 3 C -0.07 -0.09 7.12 22.51 0.16 0.07 16 4 C -0.15 -1.17 5.00 -20.08 -0.10 -1.27 16 5 C 0.55 6.31 7.29 86.72 0.63 6.94 16 6 O -0.59 -12.41 16.41 -3.99 -0.07 -12.48 16 7 N -0.58 -2.06 2.63 -629.27 -1.65 -3.71 16 8 C 0.08 -0.35 4.94 86.24 0.43 0.07 16 9 C -0.13 1.10 4.90 30.65 0.15 1.25 16 10 C -0.40 3.56 5.03 72.20 0.36 3.92 16 11 Si 1.06 -5.76 11.99 68.60 0.82 -4.94 16 12 C -0.45 2.24 8.65 113.37 0.98 3.22 16 13 C -0.47 0.16 8.65 113.37 0.98 1.14 16 14 C -0.21 -0.39 5.42 127.52 0.69 0.30 16 15 C -0.08 -0.81 8.26 22.50 0.19 -0.62 16 16 C -0.12 -0.66 5.30 -19.81 -0.11 -0.77 16 17 C -0.06 -0.10 2.36 71.24 0.17 0.07 16 18 O -0.56 -2.22 12.86 -148.98 -1.92 -4.14 16 19 Si 0.96 3.18 25.48 68.60 1.75 4.93 16 20 H -0.29 -3.16 6.74 99.48 0.67 -2.49 16 21 H -0.24 -0.25 7.11 99.48 0.71 0.45 16 22 H -0.25 -1.03 7.11 99.48 0.71 -0.32 16 23 C 0.16 0.38 6.66 22.63 0.15 0.53 16 24 O -0.49 0.51 11.85 -90.37 -1.07 -0.56 16 25 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 26 H 0.07 -0.26 7.53 -2.39 -0.02 -0.28 16 27 H 0.08 -0.57 8.08 -2.39 -0.02 -0.59 16 28 H 0.16 -0.61 4.42 -2.91 -0.01 -0.62 16 29 H 0.10 -0.71 8.11 -2.39 -0.02 -0.73 16 30 H 0.10 -0.48 5.09 -2.39 -0.01 -0.49 16 31 H 0.10 -1.26 8.14 -2.39 -0.02 -1.28 16 32 H 0.07 -0.50 6.22 -2.39 -0.01 -0.52 16 33 H 0.09 -1.02 7.99 -2.39 -0.02 -1.04 16 34 H 0.09 -0.95 7.99 -2.38 -0.02 -0.97 16 35 H 0.08 -0.46 7.96 -2.38 -0.02 -0.48 16 36 H 0.06 -0.20 7.96 -2.39 -0.02 -0.22 16 37 H 0.08 -0.48 7.96 -2.39 -0.02 -0.50 16 38 H 0.06 0.11 7.96 -2.39 -0.02 0.09 16 39 H 0.06 0.13 7.96 -2.38 -0.02 0.11 16 40 H 0.08 -0.21 7.96 -2.39 -0.02 -0.23 16 41 H 0.07 0.57 6.94 -2.39 -0.02 0.55 16 42 H 0.09 -0.07 8.00 -2.39 -0.02 -0.09 16 43 H 0.12 1.41 4.87 -2.91 -0.01 1.40 16 44 H 0.11 -0.54 7.82 -2.39 -0.02 -0.56 16 45 H 0.40 -2.24 8.74 -74.05 -0.65 -2.89 16 46 H 0.41 -4.71 9.06 -74.06 -0.67 -5.38 16 Total: 0.00 -26.42 362.32 3.54 -22.88 By element: Atomic # 1 Polarization: -18.46 SS G_CDS: 0.41 Total: -18.05 kcal Atomic # 6 Polarization: 10.81 SS G_CDS: 5.26 Total: 16.07 kcal Atomic # 7 Polarization: -2.06 SS G_CDS: -1.65 Total: -3.71 kcal Atomic # 8 Polarization: -14.12 SS G_CDS: -3.05 Total: -17.17 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.57 Total: -0.01 kcal Total: -26.42 3.54 -22.88 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_13287732.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -93.157 kcal (2) G-P(sol) polarization free energy of solvation -26.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.540 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds