Wall clock time and date at job start Thu Mar 4 2021 14:06:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86291 * 109.99793 * 2 1 4 4 C 1.87459 * 110.01603 * 121.34548 * 2 1 3 5 5 C 1.53650 * 107.32576 * 165.98016 * 4 2 1 6 6 C 1.52504 * 110.12164 * 299.66368 * 5 4 2 7 7 N 1.46336 * 111.69181 * 71.26760 * 6 5 4 8 8 C 1.34771 * 120.53625 * 109.10432 * 7 6 5 9 9 O 1.21278 * 120.00567 * 179.97438 * 8 7 6 10 10 C 1.50707 * 120.00124 * 0.02562 * 8 7 6 11 11 C 1.50691 * 109.47462 * 179.97438 * 10 8 7 12 12 C 1.34852 * 125.89438 * 275.04103 * 11 10 8 13 13 C 1.40885 * 107.41794 * 179.73227 * 12 11 10 14 14 C 1.34847 * 107.42142 * 0.38433 * 13 12 11 15 15 C 1.50701 * 125.89483 * 179.88661 * 14 13 12 16 16 O 1.42900 * 109.46882 * 119.68707 * 15 14 13 17 17 Si 1.86300 * 109.46948 * 359.68693 * 15 14 13 18 18 H 1.48500 * 109.46912 * 180.02562 * 17 15 14 19 19 H 1.48503 * 109.46942 * 299.99736 * 17 15 14 20 20 H 1.48503 * 109.47262 * 60.00072 * 17 15 14 21 21 N 1.36343 * 125.88992 * 94.99673 * 11 10 8 22 22 C 1.47792 * 118.93289 * 289.37571 * 7 6 5 23 23 H 1.09000 * 109.46893 * 298.65344 * 1 2 3 24 24 H 1.09001 * 109.47357 * 58.65438 * 1 2 3 25 25 H 1.09005 * 109.47327 * 178.65506 * 1 2 3 26 26 H 1.08999 * 109.47565 * 181.34499 * 3 2 1 27 27 H 1.08996 * 109.47580 * 301.34629 * 3 2 1 28 28 H 1.09001 * 109.47294 * 61.34205 * 3 2 1 29 29 H 1.09006 * 109.88378 * 46.52608 * 4 2 1 30 30 H 1.08998 * 109.94856 * 285.47368 * 4 2 1 31 31 H 1.09000 * 109.35993 * 179.46344 * 5 4 2 32 32 H 1.08997 * 109.35869 * 59.86303 * 5 4 2 33 33 H 1.08996 * 109.03819 * 310.69383 * 6 5 4 34 34 H 1.09006 * 108.97251 * 191.79290 * 6 5 4 35 35 H 1.09008 * 109.46676 * 59.99246 * 10 8 7 36 36 H 1.09001 * 109.46747 * 300.00280 * 10 8 7 37 37 H 1.08005 * 126.28775 * 359.97438 * 12 11 10 38 38 H 1.08008 * 126.28867 * 180.23592 * 13 12 11 39 39 H 1.09004 * 109.46875 * 239.68241 * 15 14 13 40 40 H 0.96706 * 114.00057 * 299.99456 * 16 15 14 41 41 H 0.96995 * 125.63645 * 0.02562 * 21 11 10 42 42 H 1.09004 * 110.08217 * 173.66525 * 22 7 6 43 43 H 1.09002 * 110.07853 * 295.26946 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5001 1.7506 0.0000 4 6 2.5046 -0.9163 1.5043 5 6 3.9984 -1.1900 1.2706 6 6 4.1860 -2.0447 0.0216 7 7 3.9033 -1.2884 -1.1988 8 6 4.9020 -0.9338 -2.0315 9 8 4.6568 -0.3074 -3.0406 10 6 6.3236 -1.3167 -1.7092 11 6 7.2393 -0.8050 -2.7910 12 6 7.5176 -1.4306 -3.9528 13 6 8.4073 -0.6085 -4.6720 14 6 8.6456 0.4844 -3.9187 15 6 9.5440 1.6355 -4.2913 16 8 8.7796 2.8422 -4.3326 17 14 10.2962 1.3193 -5.9661 18 1 11.1820 2.4534 -6.3330 19 1 11.0906 0.0653 -5.9231 20 1 9.2163 1.1869 -6.9768 21 7 7.9287 0.3710 -2.7645 22 6 2.5058 -0.9143 -1.5006 23 1 -0.3633 0.4928 0.9018 24 1 -0.3634 0.5346 -0.8777 25 1 -0.3634 -1.0274 -0.0241 26 1 3.5897 1.7407 -0.0241 27 1 2.1220 2.2749 -0.8776 28 1 2.1612 2.2606 0.9018 29 1 1.9688 -1.8584 1.6210 30 1 2.3751 -0.3034 2.3963 31 1 4.4087 -1.7153 2.1330 32 1 4.5235 -0.2434 1.1430 33 1 3.5140 -2.9013 0.0727 34 1 5.2153 -2.4020 -0.0120 35 1 6.4028 -2.4023 -1.6499 36 1 6.6099 -0.8788 -0.7530 37 1 7.1268 -2.3847 -4.2745 38 1 8.8241 -0.8165 -5.6464 39 1 10.3366 1.7327 -3.5494 40 1 8.0549 2.8271 -4.9728 41 1 7.9119 1.0198 -2.0437 42 1 2.4728 -0.2643 -2.3750 43 1 1.9082 -1.8090 -1.6752 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_15766672_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:06:08 Heat of formation + Delta-G solvation = -65.757682 kcal Electronic energy + Delta-G solvation = -22341.670872 eV Core-core repulsion = 19124.758101 eV Total energy + Delta-G solvation = -3216.912771 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 296.147 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.25632 -40.64865 -37.68068 -37.36798 -33.43334 -33.17865 -31.81838 -29.92243 -29.36475 -28.54938 -27.73478 -26.50574 -24.76132 -22.84258 -21.32514 -21.22572 -20.02112 -18.82392 -18.17819 -17.36494 -16.66485 -16.59305 -16.23402 -15.65540 -15.35677 -15.09628 -14.75307 -14.63797 -14.34907 -14.22599 -14.13484 -14.04139 -13.95361 -13.82768 -13.60489 -13.44534 -13.34750 -13.25150 -13.10059 -12.72660 -12.32335 -12.24016 -12.17522 -11.95914 -11.70564 -11.52942 -10.99660 -10.71362 -10.56913 -10.55286 -9.66875 -9.30098 -8.84185 1.11060 1.25518 1.43169 1.57190 1.61099 1.66029 1.68885 1.79530 1.96838 1.99919 2.25366 2.43104 2.52035 3.50656 3.60370 3.68347 3.83510 3.89012 3.89368 4.05204 4.24184 4.35470 4.45231 4.50976 4.52473 4.61067 4.62217 4.63059 4.64512 4.66646 4.68111 4.78791 4.86534 4.97443 5.03288 5.21024 5.35377 5.37520 5.39099 5.47018 5.47465 6.09554 6.23970 6.36929 6.55559 6.71836 7.26351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.447 4.447 2 Si 1.000 3.000 3 C -0.444 4.444 4 C -0.404 4.404 5 C -0.128 4.128 6 C 0.095 3.905 7 N -0.599 5.599 8 C 0.509 3.491 9 O -0.523 6.523 10 C -0.072 4.072 11 C 0.037 3.963 12 C -0.173 4.173 13 C -0.194 4.194 14 C -0.011 4.011 15 C -0.062 4.062 16 O -0.545 6.545 17 Si 0.978 3.022 18 H -0.256 1.256 19 H -0.249 1.249 20 H -0.250 1.250 21 N -0.533 5.533 22 C -0.182 4.182 23 H 0.072 0.928 24 H 0.071 0.929 25 H 0.071 0.929 26 H 0.066 0.934 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.079 0.921 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.066 0.934 33 H 0.078 0.922 34 H 0.086 0.914 35 H 0.116 0.884 36 H 0.099 0.901 37 H 0.135 0.865 38 H 0.136 0.864 39 H 0.114 0.886 40 H 0.380 0.620 41 H 0.413 0.587 42 H 0.100 0.900 43 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.725 -2.339 4.723 5.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.555 4.555 2 Si 1.194 2.806 3 C -0.552 4.552 4 C -0.491 4.491 5 C -0.166 4.166 6 C -0.028 4.028 7 N -0.334 5.334 8 C 0.296 3.704 9 O -0.398 6.398 10 C -0.113 4.113 11 C -0.077 4.077 12 C -0.197 4.197 13 C -0.219 4.219 14 C -0.124 4.124 15 C -0.172 4.172 16 O -0.351 6.351 17 Si 0.799 3.201 18 H -0.180 1.180 19 H -0.172 1.172 20 H -0.173 1.173 21 N -0.128 5.128 22 C -0.351 4.351 23 H 0.091 0.909 24 H 0.090 0.910 25 H 0.090 0.910 26 H 0.085 0.915 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.098 0.902 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.085 0.915 33 H 0.097 0.903 34 H 0.104 0.896 35 H 0.134 0.866 36 H 0.117 0.883 37 H 0.153 0.847 38 H 0.154 0.846 39 H 0.132 0.868 40 H 0.228 0.772 41 H 0.250 0.750 42 H 0.119 0.881 43 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.050 -1.883 3.906 4.336 hybrid contribution -0.680 0.008 0.518 0.855 sum -0.730 -1.875 4.424 4.860 Atomic orbital electron populations 1.26056 1.19935 1.04737 1.04800 0.79718 0.66995 0.67468 0.66374 1.26063 1.06219 1.18410 1.04533 1.26218 1.00186 1.08428 1.14248 1.21553 0.96903 1.00696 0.97463 1.21582 1.02781 0.94623 0.83785 1.47862 1.06561 1.56378 1.22578 1.20595 0.86809 0.79788 0.83177 1.90737 1.83966 1.39321 1.25799 1.20191 0.90247 1.03425 0.97392 1.19503 1.00655 0.88825 0.98696 1.20558 1.03227 1.01578 0.94371 1.20650 1.04652 0.95857 1.00761 1.20785 1.02747 0.99719 0.89168 1.24759 0.95950 0.83192 1.13274 1.86472 1.48532 1.34838 1.65233 0.85273 0.80140 0.80565 0.74154 1.17967 1.17242 1.17279 1.41756 1.36508 1.17457 1.17080 1.26744 0.85146 1.07359 1.15822 0.90879 0.90958 0.90980 0.91509 0.91085 0.91109 0.90222 0.90275 0.90341 0.91508 0.90344 0.89552 0.86608 0.88297 0.84683 0.84629 0.86799 0.77210 0.75032 0.88118 0.90771 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.96 8.65 101.05 0.87 1.83 16 2 Si 1.00 -2.81 11.97 -169.99 -2.03 -4.84 16 3 C -0.44 0.37 8.65 101.05 0.87 1.25 16 4 C -0.40 1.29 5.02 37.50 0.19 1.48 16 5 C -0.13 0.43 5.68 -26.65 -0.15 0.28 16 6 C 0.10 -0.30 5.68 -4.38 -0.02 -0.33 16 7 N -0.60 0.21 2.64 -111.75 -0.29 -0.09 16 8 C 0.51 1.03 7.69 -10.98 -0.08 0.94 16 9 O -0.52 -3.39 15.47 5.56 0.09 -3.31 16 10 C -0.07 0.05 4.59 -29.04 -0.13 -0.08 16 11 C 0.04 0.08 5.66 -81.79 -0.46 -0.39 16 12 C -0.17 -0.56 10.76 -39.78 -0.43 -0.98 16 13 C -0.19 -0.59 9.37 -39.78 -0.37 -0.96 16 14 C -0.01 -0.02 6.50 -81.79 -0.53 -0.56 16 15 C -0.06 -0.03 3.08 36.01 0.11 0.08 16 16 O -0.55 -0.77 12.88 -35.23 -0.45 -1.22 16 17 Si 0.98 0.19 25.87 -169.99 -4.40 -4.20 16 18 H -0.26 -0.32 7.11 56.52 0.40 0.09 16 19 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 20 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 21 N -0.53 -0.91 6.07 -5.44 -0.03 -0.94 16 22 C -0.18 0.08 5.41 60.56 0.33 0.41 16 23 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 24 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 25 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 26 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 27 H 0.07 -0.01 7.96 -51.93 -0.41 -0.42 16 28 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H 0.08 -0.28 7.99 -51.93 -0.41 -0.70 16 30 H 0.08 -0.25 7.99 -51.93 -0.41 -0.66 16 31 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.07 -0.20 7.90 -51.93 -0.41 -0.61 16 33 H 0.08 -0.30 8.11 -51.93 -0.42 -0.72 16 34 H 0.09 -0.41 5.93 -51.93 -0.31 -0.72 16 35 H 0.12 -0.32 7.59 -51.92 -0.39 -0.72 16 36 H 0.10 -0.31 8.01 -51.93 -0.42 -0.72 16 37 H 0.14 0.29 8.06 -52.48 -0.42 -0.13 16 38 H 0.14 0.24 6.22 -52.48 -0.33 -0.09 16 39 H 0.11 -0.07 7.96 -51.93 -0.41 -0.49 16 40 H 0.38 -0.35 8.70 45.56 0.40 0.04 16 41 H 0.41 -0.05 8.96 -40.82 -0.37 -0.42 16 42 H 0.10 0.17 6.90 -51.93 -0.36 -0.19 16 43 H 0.07 -0.10 7.99 -51.93 -0.41 -0.51 16 LS Contribution 347.21 15.07 5.23 5.23 Total: 0.00 -8.25 347.21 -8.09 -16.34 By element: Atomic # 1 Polarization: -3.55 SS G_CDS: -6.38 Total: -9.93 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: 0.19 Total: 2.97 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.33 Total: -1.03 kcal Atomic # 8 Polarization: -4.16 SS G_CDS: -0.37 Total: -4.53 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: -6.43 Total: -9.05 kcal Total LS contribution 5.23 Total: 5.23 kcal Total: -8.25 -8.09 -16.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.418 kcal (2) G-P(sol) polarization free energy of solvation -8.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.665 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.093 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.339 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds