Wall clock time and date at job start Thu Mar 4 2021 14:07:28
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 Si 1.86291 * 1
3 3 C 1.86303 * 110.07422 * 2 1
4 4 C 1.87457 * 110.01642 * 238.60715 * 2 1 3
5 5 C 1.53645 * 107.32557 * 194.01543 * 4 2 1
6 6 C 1.52009 * 110.16585 * 60.23980 * 5 4 2
7 7 N 1.46343 * 111.96998 * 288.87466 * 6 5 4
8 8 C 1.34773 * 120.52996 * 250.93737 * 7 6 5
9 9 O 1.21284 * 120.00280 * 179.72030 * 8 7 6
10 10 C 1.50706 * 120.00048 * 359.72891 * 8 7 6
11 11 C 1.53005 * 109.47031 * 179.97438 * 10 8 7
12 12 O 1.42900 * 109.46780 * 179.97438 * 11 10 8
13 13 C 1.35901 * 116.99708 * 180.02562 * 12 11 10
14 14 C 1.38711 * 120.05828 * 359.95913 * 13 12 11
15 15 C 1.38158 * 119.94786 * 180.02562 * 14 13 12
16 16 C 1.38250 * 120.05410 * 0.03976 * 15 14 13
17 17 C 1.38281 * 120.11168 * 359.97438 * 16 15 14
18 18 C 1.50699 * 119.97423 * 179.97438 * 17 16 15
19 19 O 1.42894 * 109.47272 * 245.02164 * 18 17 16
20 20 Si 1.86304 * 109.46976 * 5.02121 * 18 17 16
21 21 H 1.48500 * 109.47086 * 59.99999 * 20 18 17
22 22 H 1.48502 * 109.47126 * 179.97438 * 20 18 17
23 23 H 1.48500 * 109.46866 * 300.00159 * 20 18 17
24 24 C 1.38125 * 120.05855 * 359.97438 * 17 16 15
25 25 C 1.47786 * 118.93556 * 70.67089 * 7 6 5
26 26 H 1.09002 * 109.47614 * 298.60007 * 1 2 3
27 27 H 1.09003 * 109.47744 * 58.60084 * 1 2 3
28 28 H 1.09003 * 109.47254 * 178.60308 * 1 2 3
29 29 H 1.08998 * 109.47116 * 181.39625 * 3 2 1
30 30 H 1.08994 * 109.47328 * 301.39541 * 3 2 1
31 31 H 1.08997 * 109.47046 * 61.39750 * 3 2 1
32 32 H 1.09002 * 109.88929 * 313.47384 * 4 2 1
33 33 H 1.09005 * 109.89095 * 74.48354 * 4 2 1
34 34 H 1.09006 * 109.36056 * 180.53959 * 5 4 2
35 35 H 1.08998 * 109.35796 * 300.26815 * 5 4 2
36 36 H 1.09003 * 108.87210 * 168.23400 * 6 5 4
37 37 H 1.09001 * 108.91033 * 49.54036 * 6 5 4
38 38 H 1.08997 * 109.47618 * 59.99453 * 10 8 7
39 39 H 1.08998 * 109.46769 * 299.99595 * 10 8 7
40 40 H 1.09005 * 109.46790 * 59.99840 * 11 10 8
41 41 H 1.08996 * 109.46932 * 299.99772 * 11 10 8
42 42 H 1.08005 * 120.02810 * 0.04287 * 14 13 12
43 43 H 1.08004 * 119.97750 * 180.02562 * 15 14 13
44 44 H 1.07999 * 119.94133 * 179.97438 * 16 15 14
45 45 H 1.09006 * 109.47259 * 125.01509 * 18 17 16
46 46 H 0.96699 * 114.00548 * 60.00333 * 19 18 17
47 47 H 1.07994 * 120.03307 * 179.73079 * 24 17 16
48 48 H 1.09000 * 110.08199 * 64.70811 * 25 7 6
49 49 H 1.08998 * 110.07799 * 186.31644 * 25 7 6
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 14 1.8629 0.0000 0.0000
3 6 2.5024 1.7499 0.0000
4 6 2.5046 -0.9175 -1.5035
5 6 3.9983 -1.1909 -1.2697
6 6 4.1867 -2.0398 -0.0228
7 7 3.9033 -1.2872 1.1999
8 6 4.9021 -0.9316 2.0319
9 8 4.6569 -0.3035 3.0401
10 6 6.3237 -1.3142 1.7096
11 6 7.2536 -0.7921 2.8067
12 8 8.6015 -1.1554 2.5013
13 6 9.5602 -0.7657 3.3822
14 6 9.2110 -0.0478 4.5165
15 6 10.1875 0.3477 5.4102
16 6 11.5120 0.0292 5.1743
17 6 11.8628 -0.6861 4.0441
18 6 13.3075 -1.0312 3.7897
19 8 13.7569 -0.3606 2.6106
20 14 14.3402 -0.4909 5.2432
21 1 13.8732 -1.1878 6.4685
22 1 15.7638 -0.8314 4.9928
23 1 14.2066 0.9766 5.4270
24 6 10.8901 -1.0848 3.1481
25 6 2.5050 -0.9182 1.5045
26 1 -0.3634 0.4919 0.9023
27 1 -0.3635 0.5354 -0.8772
28 1 -0.3634 -1.0274 -0.0251
29 1 3.5920 1.7385 -0.0250
30 1 2.1243 2.2749 -0.8771
31 1 2.1650 2.2599 0.9022
32 1 1.9689 -1.8597 -1.6195
33 1 2.3739 -0.3048 -2.3956
34 1 4.4087 -1.7169 -2.1317
35 1 4.5230 -0.2443 -1.1406
36 1 5.2166 -2.3954 0.0092
37 1 3.5170 -2.8981 -0.0753
38 1 6.6097 -0.8770 0.7530
39 1 6.4034 -2.3997 1.6513
40 1 6.9678 -1.2291 3.7636
41 1 7.1737 0.2934 2.8646
42 1 8.1765 0.2016 4.7011
43 1 9.9161 0.9064 6.2938
44 1 12.2739 0.3396 5.8739
45 1 13.4056 -2.1084 3.6548
46 1 13.6982 0.6034 2.6597
47 1 11.1651 -1.6397 2.2633
48 1 1.9104 -1.8153 1.6774
49 1 2.4713 -0.2708 2.3806
RHF calculation, no. of doubly occupied orbitals= 61
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
m_22_15766672_4549614.mol2 49
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Thu Mar 4 2021 14:07:28
Heat of formation + Delta-G solvation = -121.727467 kcal
Electronic energy + Delta-G solvation = -26735.544489 eV
Core-core repulsion = 22979.184646 eV
Total energy + Delta-G solvation = -3756.359844 eV
No. of doubly occupied orbitals = 61
Molecular weight
(most abundant/longest-lived isotopes) = 337.167 amu
Computer time = 0.82 seconds
Orbital eigenvalues (eV)
-41.38181 -40.84954 -39.09056 -37.56227 -37.21572 -33.49997 -33.39486 -32.41426
-30.89206 -29.54568 -28.56236 -28.19292 -27.08443 -26.64822 -24.61783 -23.63711
-22.82672 -21.91823 -20.02947 -19.21908 -18.23221 -17.84879 -17.52034 -17.14044
-17.05406 -16.72989 -16.40666 -16.12223 -15.58621 -15.37523 -15.13264 -14.93763
-14.68162 -14.46409 -14.30012 -14.27780 -14.18617 -14.00091 -13.79155 -13.61001
-13.38377 -13.29330 -13.24611 -13.05958 -12.94075 -12.82025 -12.44535 -12.28013
-12.19523 -12.14099 -11.86591 -11.77167 -11.58248 -11.48309 -11.02501 -10.82553
-10.57011 -10.44530 -9.86826 -9.37677 -9.18557 0.27061 0.46212 1.15258
1.34065 1.45369 1.54044 1.56100 1.63098 1.70662 1.86483 1.93737
2.35132 2.40626 2.73314 3.45741 3.48602 3.65091 3.70077 3.78937
3.83022 3.91151 3.92183 4.08398 4.23166 4.25263 4.29012 4.36391
4.43645 4.48602 4.57493 4.58383 4.61412 4.62629 4.63135 4.64056
4.66071 4.67746 4.75758 4.79483 4.93050 5.02919 5.03500 5.20242
5.32108 5.33666 5.42183 5.43204 5.46835 5.49250 5.73915 6.25996
6.42629 6.55796 7.10057
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.446 4.446
2 Si 0.999 3.001
3 C -0.445 4.445
4 C -0.405 4.405
5 C -0.128 4.128
6 C 0.094 3.906
7 N -0.595 5.595
8 C 0.517 3.483
9 O -0.539 6.539
10 C -0.142 4.142
11 C 0.074 3.926
12 O -0.316 6.316
13 C 0.133 3.867
14 C -0.202 4.202
15 C -0.073 4.073
16 C -0.164 4.164
17 C -0.083 4.083
18 C -0.081 4.081
19 O -0.537 6.537
20 Si 0.954 3.046
21 H -0.250 1.250
22 H -0.255 1.255
23 H -0.252 1.252
24 C -0.123 4.123
25 C -0.182 4.182
26 H 0.071 0.929
27 H 0.072 0.928
28 H 0.071 0.929
29 H 0.067 0.933
30 H 0.070 0.930
31 H 0.070 0.930
32 H 0.079 0.921
33 H 0.079 0.921
34 H 0.080 0.920
35 H 0.068 0.932
36 H 0.088 0.912
37 H 0.079 0.921
38 H 0.107 0.893
39 H 0.107 0.893
40 H 0.072 0.928
41 H 0.073 0.927
42 H 0.132 0.868
43 H 0.129 0.871
44 H 0.122 0.878
45 H 0.119 0.881
46 H 0.377 0.623
47 H 0.136 0.864
48 H 0.075 0.925
49 H 0.101 0.899
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges -2.134 -0.812 -2.822 3.629
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.555 4.555
2 Si 1.194 2.806
3 C -0.553 4.553
4 C -0.491 4.491
5 C -0.166 4.166
6 C -0.029 4.029
7 N -0.328 5.328
8 C 0.305 3.695
9 O -0.417 6.417
10 C -0.181 4.181
11 C -0.001 4.001
12 O -0.230 6.230
13 C 0.088 3.912
14 C -0.221 4.221
15 C -0.091 4.091
16 C -0.182 4.182
17 C -0.083 4.083
18 C -0.192 4.192
19 O -0.342 6.342
20 Si 0.777 3.223
21 H -0.174 1.174
22 H -0.179 1.179
23 H -0.175 1.175
24 C -0.141 4.141
25 C -0.350 4.350
26 H 0.090 0.910
27 H 0.092 0.908
28 H 0.090 0.910
29 H 0.086 0.914
30 H 0.090 0.910
31 H 0.089 0.911
32 H 0.098 0.902
33 H 0.098 0.902
34 H 0.098 0.902
35 H 0.087 0.913
36 H 0.107 0.893
37 H 0.097 0.903
38 H 0.125 0.875
39 H 0.125 0.875
40 H 0.090 0.910
41 H 0.091 0.909
42 H 0.150 0.850
43 H 0.147 0.853
44 H 0.140 0.860
45 H 0.137 0.863
46 H 0.224 0.776
47 H 0.154 0.846
48 H 0.094 0.906
49 H 0.120 0.880
Dipole moment (debyes) X Y Z Total
from point charges -1.636 -0.961 -1.928 2.705
hybrid contribution -0.659 0.402 -0.036 0.773
sum -2.295 -0.559 -1.964 3.072
Atomic orbital electron populations
1.26050 1.19869 1.04748 1.04828 0.79772 0.67025 0.67530 0.66294
1.26059 1.06328 1.18278 1.04591 1.26223 1.00173 1.08428 1.14292
1.21466 0.96915 1.00853 0.97408 1.21517 1.03020 0.94698 0.83672
1.47818 1.06572 1.56088 1.22358 1.20297 0.86712 0.79455 0.83000
1.90722 1.84371 1.40214 1.26354 1.21523 0.91249 1.04312 1.01048
1.22436 0.78671 1.00742 0.98284 1.85974 1.15861 1.74437 1.46705
1.18970 0.88785 0.94418 0.89076 1.21393 1.00941 1.03723 0.96045
1.20906 0.92125 0.97573 0.98455 1.20971 0.96955 1.02075 0.98215
1.20086 0.95869 0.97791 0.94584 1.25026 0.93898 1.02002 0.98260
1.86522 1.86573 1.23686 1.37425 0.85615 0.79263 0.80955 0.76446
1.17368 1.17860 1.17548 1.20241 0.88918 1.03713 1.01257 1.26839
0.84808 1.07485 1.15903 0.90951 0.90844 0.90978 0.91380 0.91047
0.91064 0.90233 0.90194 0.90164 0.91349 0.89350 0.90292 0.87507
0.87520 0.90951 0.90921 0.84977 0.85273 0.86041 0.86275 0.77599
0.84650 0.90618 0.88015
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 12.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.45 1.08 8.65 101.05 0.87 1.96 16
2 Si 1.00 -3.08 11.99 -169.99 -2.04 -5.12 16
3 C -0.44 0.51 8.65 101.05 0.87 1.38 16
4 C -0.40 1.31 5.02 37.49 0.19 1.50 16
5 C -0.13 0.41 5.67 -26.90 -0.15 0.26 16
6 C 0.09 -0.28 5.65 -4.63 -0.03 -0.31 16
7 N -0.59 0.32 2.63 -112.02 -0.30 0.02 16
8 C 0.52 0.76 7.70 -10.98 -0.08 0.68 16
9 O -0.54 -2.79 15.41 5.55 0.09 -2.71 16
10 C -0.14 0.11 4.42 -27.88 -0.12 -0.01 16
11 C 0.07 0.07 4.03 37.16 0.15 0.22 16
12 O -0.32 -0.72 10.14 -19.43 -0.20 -0.92 16
13 C 0.13 0.35 6.69 -39.21 -0.26 0.08 16
14 C -0.20 -0.38 9.04 -39.44 -0.36 -0.74 16
15 C -0.07 -0.08 10.04 -39.61 -0.40 -0.48 16
16 C -0.16 -0.18 8.67 -39.56 -0.34 -0.53 16
17 C -0.08 -0.11 5.35 -104.65 -0.56 -0.67 16
18 C -0.08 -0.01 2.80 36.01 0.10 0.10 16
19 O -0.54 -0.40 12.83 -35.23 -0.45 -0.85 16
20 Si 0.95 -0.27 25.14 -169.99 -4.27 -4.54 16
21 H -0.25 -0.09 7.11 56.52 0.40 0.31 16
22 H -0.25 -0.27 7.11 56.52 0.40 0.13 16
23 H -0.25 0.04 7.04 56.52 0.40 0.44 16
24 C -0.12 -0.27 9.62 -39.43 -0.38 -0.65 16
25 C -0.18 0.16 5.44 60.55 0.33 0.49 16
26 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16
27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16
28 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16
29 H 0.07 -0.02 7.96 -51.93 -0.41 -0.44 16
30 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16
31 H 0.07 -0.04 7.96 -51.93 -0.41 -0.45 16
32 H 0.08 -0.28 7.99 -51.93 -0.41 -0.70 16
33 H 0.08 -0.25 7.99 -51.93 -0.41 -0.67 16
34 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16
35 H 0.07 -0.19 7.89 -51.93 -0.41 -0.60 16
36 H 0.09 -0.38 5.93 -51.93 -0.31 -0.69 16
37 H 0.08 -0.30 8.10 -51.93 -0.42 -0.72 16
38 H 0.11 -0.25 8.01 -51.93 -0.42 -0.66 16
39 H 0.11 -0.24 7.60 -51.93 -0.39 -0.63 16
40 H 0.07 0.10 7.62 -51.93 -0.40 -0.29 16
41 H 0.07 0.10 7.62 -51.93 -0.40 -0.30 16
42 H 0.13 0.13 6.30 -52.48 -0.33 -0.20 16
43 H 0.13 -0.11 8.06 -52.48 -0.42 -0.53 16
44 H 0.12 -0.03 4.86 -52.49 -0.26 -0.29 16
45 H 0.12 -0.09 7.96 -51.93 -0.41 -0.51 16
46 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16
47 H 0.14 0.24 8.06 -52.49 -0.42 -0.18 16
48 H 0.08 -0.13 8.00 -51.93 -0.42 -0.55 16
49 H 0.10 0.10 6.90 -51.93 -0.36 -0.26 16
LS Contribution 390.34 15.07 5.88 5.88
Total: 0.00 -7.30 390.34 -8.95 -16.25
By element:
Atomic # 1 Polarization: -3.82 SS G_CDS: -7.50 Total: -11.31 kcal
Atomic # 6 Polarization: 3.46 SS G_CDS: -0.17 Total: 3.29 kcal
Atomic # 7 Polarization: 0.32 SS G_CDS: -0.30 Total: 0.02 kcal
Atomic # 8 Polarization: -3.91 SS G_CDS: -0.56 Total: -4.47 kcal
Atomic # 14 Polarization: -3.35 SS G_CDS: -6.31 Total: -9.66 kcal
Total LS contribution 5.88 Total: 5.88 kcal
Total: -7.30 -8.95 -16.25 kcal
The number of atoms in the molecule is 49
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
m_22_15766672_4549614.mol2 49
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -105.479 kcal
(2) G-P(sol) polarization free energy of solvation -7.298 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.777 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.950 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.249 kcal
(6) G-S(sol) free energy of system = (1) + (5) -121.727 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.82 seconds