Wall clock time and date at job start Thu Mar 4 2021 14:13:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86293 * 1 3 3 C 1.86300 * 110.07414 * 2 1 4 4 C 1.87460 * 110.01570 * 238.60730 * 2 1 3 5 5 C 1.53642 * 107.32626 * 194.01390 * 4 2 1 6 6 C 1.52018 * 110.16415 * 60.24029 * 5 4 2 7 7 N 1.46344 * 111.97171 * 288.87210 * 6 5 4 8 8 C 1.34779 * 120.53577 * 250.94847 * 7 6 5 9 9 O 1.21281 * 120.00113 * 179.72009 * 8 7 6 10 10 C 1.50699 * 119.99660 * 359.71588 * 8 7 6 11 11 F 1.39902 * 109.47173 * 60.00311 * 10 8 7 12 12 F 1.39908 * 109.47143 * 300.00380 * 10 8 7 13 13 O 1.42899 * 109.47210 * 180.02562 * 10 8 7 14 14 C 1.35892 * 117.00396 * 179.97438 * 13 10 8 15 15 C 1.38736 * 120.05957 * 180.02562 * 14 13 10 16 16 C 1.38147 * 119.94540 * 180.26040 * 15 14 13 17 17 C 1.38270 * 120.05177 * 359.46077 * 16 15 14 18 18 C 1.50705 * 119.93813 * 180.24023 * 17 16 15 19 19 O 1.42900 * 109.46728 * 245.27253 * 18 17 16 20 20 Si 1.86289 * 109.47351 * 5.27700 * 18 17 16 21 21 H 1.48508 * 109.47248 * 300.00220 * 20 18 17 22 22 H 1.48503 * 109.47378 * 60.00150 * 20 18 17 23 23 H 1.48507 * 109.47320 * 180.02562 * 20 18 17 24 24 C 1.38259 * 120.11412 * 0.51388 * 17 16 15 25 25 C 1.38146 * 120.05869 * 359.76948 * 24 17 16 26 26 C 1.47799 * 118.93349 * 70.66499 * 7 6 5 27 27 H 1.09002 * 109.47245 * 298.59956 * 1 2 3 28 28 H 1.08997 * 109.47860 * 58.60725 * 1 2 3 29 29 H 1.09005 * 109.47051 * 178.60528 * 1 2 3 30 30 H 1.08999 * 109.47665 * 181.39895 * 3 2 1 31 31 H 1.09000 * 109.47334 * 301.39730 * 3 2 1 32 32 H 1.09002 * 109.47243 * 61.39386 * 3 2 1 33 33 H 1.09000 * 109.88279 * 313.47089 * 4 2 1 34 34 H 1.09004 * 109.88824 * 74.48375 * 4 2 1 35 35 H 1.08996 * 109.36626 * 180.53739 * 5 4 2 36 36 H 1.09003 * 109.36326 * 300.27073 * 5 4 2 37 37 H 1.08998 * 108.86927 * 168.23880 * 6 5 4 38 38 H 1.08992 * 108.91437 * 49.53624 * 6 5 4 39 39 H 1.08002 * 120.02291 * 359.97438 * 15 14 13 40 40 H 1.07995 * 119.96712 * 179.72331 * 16 15 14 41 41 H 1.08997 * 109.46900 * 125.28180 * 18 17 16 42 42 H 0.96700 * 113.99930 * 179.97438 * 19 18 17 43 43 H 1.08006 * 119.97187 * 179.74370 * 24 17 16 44 44 H 1.07993 * 120.03340 * 179.97438 * 25 24 17 45 45 H 1.08998 * 110.07154 * 64.71341 * 26 7 6 46 46 H 1.08995 * 110.08017 * 186.31524 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.5024 1.7498 0.0000 4 6 2.5046 -0.9175 -1.5035 5 6 3.9983 -1.1909 -1.2697 6 6 4.1867 -2.0398 -0.0228 7 7 3.9034 -1.2872 1.1999 8 6 4.9022 -0.9314 2.0319 9 8 4.6569 -0.3034 3.0401 10 6 6.3237 -1.3141 1.7096 11 9 6.6907 -0.7529 0.4817 12 9 6.4261 -2.7074 1.6348 13 8 7.1922 -0.8274 2.7347 14 6 8.5183 -1.0895 2.5958 15 6 9.4183 -0.6470 3.5544 16 6 10.7666 -0.9102 3.4081 17 6 11.2180 -1.6237 2.3131 18 6 12.6887 -1.9140 2.1588 19 8 13.1899 -1.2346 1.0059 20 14 13.6003 -1.3242 3.6726 21 1 13.3986 0.1384 3.8334 22 1 13.0794 -2.0303 4.8707 23 1 15.0497 -1.6097 3.5203 24 6 10.3230 -2.0663 1.3566 25 6 8.9745 -1.8007 1.4953 26 6 2.5050 -0.9181 1.5045 27 1 -0.3634 0.4919 0.9023 28 1 -0.3635 0.5353 -0.8772 29 1 -0.3633 -1.0274 -0.0250 30 1 3.5920 1.7386 -0.0251 31 1 2.1242 2.2749 -0.8772 32 1 2.1649 2.2600 0.9022 33 1 1.9688 -1.8597 -1.6194 34 1 2.3738 -0.3048 -2.3956 35 1 4.4087 -1.7169 -2.1317 36 1 4.5231 -0.2443 -1.1406 37 1 5.2166 -2.3954 0.0092 38 1 3.5170 -2.8981 -0.0752 39 1 9.0656 -0.0932 4.4119 40 1 11.4680 -0.5620 4.1518 41 1 12.8367 -2.9874 2.0408 42 1 14.1328 -1.3762 0.8449 43 1 10.6786 -2.6198 0.5001 44 1 8.2759 -2.1462 0.7478 45 1 1.9105 -1.8152 1.6774 46 1 2.4712 -0.2707 2.3806 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_15766672_4549640.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:13:09 Heat of formation + Delta-G solvation = -193.969921 kcal Electronic energy + Delta-G solvation = -31298.542342 eV Core-core repulsion = 26755.679499 eV Total energy + Delta-G solvation = -4542.862844 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 359.132 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -51.05358 -48.92539 -41.46596 -41.16379 -39.30216 -37.87921 -37.28924 -33.60927 -32.40265 -32.31587 -30.11208 -29.23957 -28.41549 -27.74055 -26.74846 -25.82380 -24.39497 -22.95738 -22.57706 -21.35605 -20.65613 -19.76727 -19.14626 -18.45208 -18.21673 -17.43986 -17.12803 -16.91489 -16.68799 -16.22949 -15.97594 -15.87921 -15.45861 -15.37724 -15.22870 -15.18520 -15.08192 -14.74060 -14.55241 -14.39685 -14.22753 -14.18597 -14.01678 -13.88099 -13.80079 -13.58097 -13.22359 -13.16570 -13.12080 -13.08079 -12.47299 -12.26553 -12.23321 -12.13032 -12.01684 -11.78529 -11.75428 -11.40716 -10.84885 -10.39684 -10.33207 -10.24076 -9.66104 -9.60691 -0.04672 0.12396 0.41990 0.59874 1.16065 1.45853 1.51641 1.56412 1.62818 1.79501 1.84348 1.91316 2.03496 2.39042 2.48170 2.50791 3.17453 3.40138 3.54744 3.61490 3.71322 3.83622 3.98424 4.05191 4.09650 4.30115 4.34845 4.37396 4.48646 4.52245 4.68229 4.70725 4.73670 4.79494 4.82093 4.87315 4.88249 4.89540 4.93647 5.03133 5.07767 5.24208 5.28316 5.30104 5.46663 5.56102 5.64865 5.67036 5.79511 6.31309 6.82783 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.449 4.449 2 Si 1.071 2.929 3 C -0.471 4.471 4 C -0.404 4.404 5 C -0.128 4.128 6 C 0.071 3.929 7 N -0.560 5.560 8 C 0.499 3.501 9 O -0.517 6.517 10 C 0.436 3.564 11 F -0.170 7.170 12 F -0.170 7.170 13 O -0.306 6.306 14 C 0.082 3.918 15 C -0.132 4.132 16 C -0.093 4.093 17 C -0.106 4.106 18 C -0.078 4.078 19 O -0.562 6.562 20 Si 0.972 3.028 21 H -0.269 1.269 22 H -0.257 1.257 23 H -0.252 1.252 24 C -0.054 4.054 25 C -0.196 4.196 26 C -0.209 4.209 27 H 0.069 0.931 28 H 0.078 0.922 29 H 0.082 0.918 30 H 0.052 0.948 31 H 0.079 0.921 32 H 0.062 0.938 33 H 0.099 0.901 34 H 0.090 0.910 35 H 0.098 0.902 36 H 0.060 0.940 37 H 0.082 0.918 38 H 0.117 0.883 39 H 0.149 0.851 40 H 0.146 0.854 41 H 0.101 0.899 42 H 0.400 0.600 43 H 0.153 0.847 44 H 0.140 0.860 45 H 0.107 0.893 46 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.957 -3.878 -5.042 6.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.260 2.740 3 C -0.576 4.576 4 C -0.491 4.491 5 C -0.166 4.166 6 C -0.050 4.050 7 N -0.292 5.292 8 C 0.279 3.721 9 O -0.393 6.393 10 C 0.358 3.642 11 F -0.151 7.151 12 F -0.152 7.152 13 O -0.223 6.223 14 C 0.039 3.961 15 C -0.150 4.150 16 C -0.110 4.110 17 C -0.106 4.106 18 C -0.188 4.188 19 O -0.372 6.372 20 Si 0.797 3.203 21 H -0.194 1.194 22 H -0.181 1.181 23 H -0.176 1.176 24 C -0.071 4.071 25 C -0.215 4.215 26 C -0.371 4.371 27 H 0.088 0.912 28 H 0.097 0.903 29 H 0.101 0.899 30 H 0.071 0.929 31 H 0.098 0.902 32 H 0.081 0.919 33 H 0.118 0.882 34 H 0.109 0.891 35 H 0.116 0.884 36 H 0.079 0.921 37 H 0.101 0.899 38 H 0.135 0.865 39 H 0.167 0.833 40 H 0.163 0.837 41 H 0.119 0.881 42 H 0.250 0.750 43 H 0.171 0.829 44 H 0.157 0.843 45 H 0.126 0.874 46 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.320 -3.005 -3.645 4.905 hybrid contribution 0.624 -0.243 -0.204 0.700 sum -0.696 -3.247 -3.849 5.084 Atomic orbital electron populations 1.26067 1.19184 1.05570 1.05031 0.78780 0.66543 0.64621 0.64007 1.26411 1.05597 1.20990 1.04610 1.26240 0.99089 1.09528 1.14263 1.21486 0.97981 1.00422 0.96759 1.22135 1.04240 0.95902 0.82755 1.48006 1.06403 1.53277 1.21538 1.19617 0.84556 0.82732 0.85148 1.90803 1.82132 1.39735 1.26616 1.21777 0.91335 0.75052 0.76047 1.93180 1.92639 1.84797 1.44523 1.93149 1.96557 1.29921 1.95549 1.86640 1.16760 1.73981 1.44932 1.19251 0.81024 0.98701 0.97109 1.20574 0.91677 1.03226 0.99564 1.21080 0.94773 0.96961 0.98232 1.19641 0.95448 0.99894 0.95598 1.24711 0.93756 1.01138 0.99167 1.86463 1.31285 1.73532 1.45882 0.85373 0.79034 0.79807 0.76120 1.19431 1.18094 1.17564 1.21038 0.90808 0.96968 0.98335 1.21699 0.98678 1.02953 0.98148 1.27657 0.81912 1.09494 1.18083 0.91205 0.90269 0.89867 0.92882 0.90220 0.91874 0.88232 0.89079 0.88352 0.92149 0.89936 0.86469 0.83317 0.83690 0.88088 0.74983 0.82942 0.84270 0.87446 0.89235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 3.27 8.65 113.37 0.98 4.25 16 2 Si 1.07 -7.56 11.99 68.60 0.82 -6.74 16 3 C -0.47 0.54 8.65 113.37 0.98 1.52 16 4 C -0.40 3.45 5.02 72.20 0.36 3.82 16 5 C -0.13 0.74 5.67 30.49 0.17 0.91 16 6 C 0.07 -0.27 5.12 86.09 0.44 0.17 16 7 N -0.56 -1.02 2.64 -626.71 -1.65 -2.68 16 8 C 0.50 4.66 7.26 87.66 0.64 5.30 16 9 O -0.52 -8.46 15.93 16.00 0.25 -8.20 16 10 C 0.44 3.67 1.41 71.24 0.10 3.77 16 11 F -0.17 -1.05 14.02 44.97 0.63 -0.42 16 12 F -0.17 -1.01 13.55 44.97 0.61 -0.40 16 13 O -0.31 -3.84 9.60 -73.30 -0.70 -4.55 16 14 C 0.08 0.81 6.48 22.51 0.15 0.95 16 15 C -0.13 -0.96 9.99 22.37 0.22 -0.74 16 16 C -0.09 -0.43 8.66 22.26 0.19 -0.24 16 17 C -0.11 -0.41 5.38 -19.85 -0.11 -0.51 16 18 C -0.08 0.11 2.79 71.24 0.20 0.31 16 19 O -0.56 0.34 12.81 -148.98 -1.91 -1.57 16 20 Si 0.97 -1.54 25.14 68.60 1.72 0.19 16 21 H -0.27 -0.57 7.03 99.48 0.70 0.13 16 22 H -0.26 0.05 7.11 99.48 0.71 0.76 16 23 H -0.25 0.55 7.11 99.48 0.71 1.25 16 24 C -0.05 -0.22 9.68 22.25 0.22 -0.01 16 25 C -0.20 -1.34 8.26 22.37 0.18 -1.15 16 26 C -0.21 0.38 5.44 127.52 0.69 1.08 16 27 H 0.07 -0.42 7.96 -2.39 -0.02 -0.44 16 28 H 0.08 -0.58 7.96 -2.39 -0.02 -0.60 16 29 H 0.08 -0.72 7.96 -2.38 -0.02 -0.74 16 30 H 0.05 0.11 7.96 -2.39 -0.02 0.09 16 31 H 0.08 -0.22 7.96 -2.39 -0.02 -0.24 16 32 H 0.06 0.03 7.96 -2.39 -0.02 0.01 16 33 H 0.10 -1.12 7.99 -2.39 -0.02 -1.14 16 34 H 0.09 -0.82 7.99 -2.38 -0.02 -0.84 16 35 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 36 H 0.06 -0.18 7.89 -2.39 -0.02 -0.20 16 37 H 0.08 -0.22 4.64 -2.39 -0.01 -0.23 16 38 H 0.12 -1.01 8.10 -2.39 -0.02 -1.03 16 39 H 0.15 0.70 8.06 -2.91 -0.02 0.67 16 40 H 0.15 0.15 4.86 -2.91 -0.01 0.14 16 41 H 0.10 -0.62 7.96 -2.39 -0.02 -0.64 16 42 H 0.40 -3.92 8.74 -74.06 -0.65 -4.57 16 43 H 0.15 -0.01 8.06 -2.91 -0.02 -0.03 16 44 H 0.14 0.67 5.10 -2.91 -0.01 0.65 16 45 H 0.11 -0.64 8.00 -2.39 -0.02 -0.66 16 46 H 0.09 0.21 6.90 -2.39 -0.02 0.19 16 Total: 0.00 -19.50 375.61 6.32 -13.19 By element: Atomic # 1 Polarization: -9.37 SS G_CDS: 1.11 Total: -8.25 kcal Atomic # 6 Polarization: 14.01 SS G_CDS: 5.42 Total: 19.43 kcal Atomic # 7 Polarization: -1.02 SS G_CDS: -1.65 Total: -2.68 kcal Atomic # 8 Polarization: -11.96 SS G_CDS: -2.36 Total: -14.32 kcal Atomic # 9 Polarization: -2.06 SS G_CDS: 1.24 Total: -0.82 kcal Atomic # 14 Polarization: -9.09 SS G_CDS: 2.55 Total: -6.55 kcal Total: -19.50 6.32 -13.19 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_15766672_4549640.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -180.781 kcal (2) G-P(sol) polarization free energy of solvation -19.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -200.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -193.970 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds