Wall clock time and date at job start Thu Mar 4 2021 15:38:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.45201 * 109.46957 * 2 1 4 4 C 1.34230 * 117.00219 * 179.97438 * 3 2 1 5 5 O 1.20829 * 119.99692 * 0.02562 * 4 3 2 6 6 C 1.50691 * 120.00286 * 179.97438 * 4 3 2 7 7 H 1.09000 * 112.85191 * 48.80656 * 6 4 3 8 8 C 1.53782 * 113.61668 * 179.97438 * 6 4 3 9 9 C 1.53785 * 87.07904 * 140.06819 * 8 6 4 10 10 O 1.42897 * 113.61673 * 89.20505 * 9 8 6 11 11 C 1.53009 * 113.61219 * 220.02250 * 9 8 6 12 12 N 1.46497 * 109.46769 * 180.02562 * 11 9 8 13 13 C 1.34780 * 119.99813 * 179.97438 * 12 11 9 14 14 O 1.21576 * 119.99777 * 0.02562 * 13 12 11 15 15 C 1.47708 * 119.99887 * 179.97438 * 13 12 11 16 16 N 1.31806 * 126.52170 * 359.97438 * 15 13 12 17 17 N 1.28472 * 110.07496 * 179.74048 * 16 15 13 18 18 C 1.46493 * 124.88699 * 180.29475 * 17 16 15 19 19 C 1.35033 * 110.22734 * 0.45691 * 17 16 15 20 20 C 1.50699 * 126.38537 * 179.81299 * 19 17 16 21 21 O 1.42903 * 109.47152 * 29.71671 * 20 19 17 22 22 Si 1.86305 * 109.47184 * 149.71142 * 20 19 17 23 23 C 1.35371 * 107.23106 * 359.55001 * 19 17 16 24 24 C 1.53778 * 87.08457 * 334.56886 * 9 8 6 25 25 H 1.09005 * 109.47060 * 299.99567 * 1 2 3 26 26 H 1.09001 * 109.47500 * 59.99690 * 1 2 3 27 27 H 1.09004 * 109.47081 * 180.02562 * 1 2 3 28 28 H 1.08992 * 109.46977 * 240.00196 * 2 1 3 29 29 H 1.09000 * 109.47339 * 119.99781 * 2 1 3 30 30 H 1.09003 * 113.61145 * 25.51995 * 8 6 4 31 31 H 1.08997 * 113.69612 * 254.62781 * 8 6 4 32 32 H 0.96696 * 114.00597 * 181.52610 * 10 9 8 33 33 H 1.08998 * 109.47185 * 60.00247 * 11 9 8 34 34 H 1.08999 * 109.46925 * 300.00095 * 11 9 8 35 35 H 0.96997 * 120.00656 * 359.97438 * 12 11 9 36 36 H 1.08998 * 109.47153 * 270.18413 * 18 17 16 37 37 H 1.09004 * 109.47085 * 30.18554 * 18 17 16 38 38 H 1.08998 * 109.47512 * 150.18368 * 18 17 16 39 39 H 1.08997 * 109.47198 * 269.71348 * 20 19 17 40 40 H 0.96700 * 114.00311 * 180.02562 * 21 20 19 41 41 H 1.48499 * 109.99670 * 178.68093 * 22 20 19 42 42 H 1.48497 * 110.00233 * 300.00062 * 22 20 19 43 43 H 1.07997 * 127.24866 * 180.24347 * 23 19 17 44 44 H 1.09001 * 113.61525 * 139.97775 * 24 9 8 45 45 H 1.08997 * 113.61520 * 270.88783 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0140 1.3690 0.0000 4 6 3.3447 1.5449 0.0005 5 8 4.0807 0.5867 0.0005 6 6 3.9206 2.9374 0.0000 7 1 3.4708 3.5819 0.7552 8 6 5.4582 2.9682 0.0013 9 6 5.3571 4.1434 -0.9855 10 8 5.2837 5.4207 -0.3490 11 6 6.4003 4.0959 -2.1039 12 7 6.2228 5.2517 -2.9863 13 6 7.0356 5.4198 -4.0483 14 8 7.9156 4.6119 -4.2741 15 6 6.8563 6.5848 -4.9384 16 7 5.9491 7.5331 -4.8162 17 7 6.0819 8.3947 -5.7599 18 6 5.2464 9.5859 -5.9306 19 6 7.1001 8.0424 -6.5738 20 6 7.5682 8.7908 -7.7952 21 8 7.3118 10.1864 -7.6261 22 14 9.3967 8.5192 -8.0271 23 6 7.6258 6.8948 -6.0848 24 6 3.9873 3.5781 -1.3965 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0277 0.0005 28 1 1.8933 -0.5138 -0.8899 29 1 1.8934 -0.5138 0.8900 30 1 5.9131 2.0755 -0.4279 31 1 5.8900 3.2422 0.9639 32 1 5.1965 6.1620 -0.9637 33 1 6.2761 3.1777 -2.6778 34 1 7.3997 4.1207 -1.6697 35 1 5.5205 5.8961 -2.8064 36 1 4.3871 9.3405 -6.5547 37 1 4.9010 9.9302 -4.9558 38 1 5.8294 10.3732 -6.4083 39 1 7.0327 8.4266 -8.6719 40 1 7.5880 10.7308 -8.3761 41 1 9.8646 9.2261 -9.2464 42 1 10.1382 9.0116 -6.8385 43 1 8.4571 6.3338 -6.4855 44 1 3.2303 4.3448 -1.5617 45 1 4.0402 2.8521 -2.2078 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16466198_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:38:15 Heat of formation + Delta-G solvation = -88.524442 kcal Electronic energy + Delta-G solvation = -29388.640158 eV Core-core repulsion = 24990.173002 eV Total energy + Delta-G solvation = -4398.467156 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.156 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.81946 -42.13463 -40.91362 -39.95297 -38.09304 -37.76792 -36.02835 -35.38691 -34.39266 -32.80054 -32.66866 -30.06341 -28.36583 -27.04568 -26.82296 -26.14294 -24.19870 -23.55151 -22.19296 -21.92322 -21.03586 -20.76580 -19.14563 -18.71475 -18.57571 -17.82583 -17.77696 -17.44594 -17.40842 -17.36735 -16.74918 -16.39609 -16.17088 -15.95962 -15.45649 -15.16591 -14.94858 -14.80284 -14.75106 -14.44454 -14.19893 -14.04716 -13.80802 -13.57857 -13.52489 -13.36825 -13.26004 -12.97963 -12.86263 -12.76231 -12.57347 -12.42118 -12.29625 -11.86010 -11.77934 -11.58225 -11.53371 -11.31732 -11.00075 -10.92962 -10.39239 -10.06369 -9.86793 -4.88290 0.42185 0.80099 1.03975 1.26848 1.53042 1.60216 1.65746 1.96697 2.00539 2.27267 2.83240 2.93914 3.10844 3.22987 3.38373 3.44543 3.48617 3.52453 3.89526 3.95541 4.02865 4.04585 4.20075 4.30469 4.31194 4.33580 4.38064 4.38309 4.49634 4.58078 4.63592 4.67097 4.69062 4.79632 4.85422 4.86349 4.87752 4.90340 5.09678 5.12376 5.17025 5.27838 5.41003 5.67923 6.24739 6.49745 6.56092 6.63277 6.80608 7.04706 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.052 3.948 3 O -0.360 6.360 4 C 0.471 3.529 5 O -0.537 6.537 6 C -0.101 4.101 7 H 0.144 0.856 8 C -0.104 4.104 9 C 0.112 3.888 10 O -0.539 6.539 11 C 0.106 3.894 12 N -0.706 5.706 13 C 0.608 3.392 14 O -0.561 6.561 15 C -0.040 4.040 16 N -0.264 5.264 17 N -0.263 5.263 18 C 0.070 3.930 19 C 0.024 3.976 20 C -0.045 4.045 21 O -0.553 6.553 22 Si 0.773 3.227 23 C -0.191 4.191 24 C -0.137 4.137 25 H 0.068 0.932 26 H 0.069 0.931 27 H 0.096 0.904 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.108 0.892 31 H 0.094 0.906 32 H 0.391 0.609 33 H 0.083 0.917 34 H 0.075 0.925 35 H 0.413 0.587 36 H 0.097 0.903 37 H 0.100 0.900 38 H 0.127 0.873 39 H 0.117 0.883 40 H 0.406 0.594 41 H -0.266 1.266 42 H -0.311 1.311 43 H 0.183 0.817 44 H 0.107 0.893 45 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.105 4.873 -5.061 8.684 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.021 4.021 3 O -0.277 6.277 4 C 0.315 3.685 5 O -0.427 6.427 6 C -0.119 4.119 7 H 0.161 0.839 8 C -0.142 4.142 9 C 0.070 3.930 10 O -0.347 6.347 11 C -0.017 4.017 12 N -0.360 5.360 13 C 0.393 3.607 14 O -0.438 6.438 15 C -0.198 4.198 16 N -0.102 5.102 17 N -0.052 5.052 18 C -0.068 4.068 19 C -0.101 4.101 20 C -0.155 4.155 21 O -0.365 6.365 22 Si 0.677 3.323 23 C -0.219 4.219 24 C -0.174 4.174 25 H 0.087 0.913 26 H 0.088 0.912 27 H 0.115 0.885 28 H 0.087 0.913 29 H 0.086 0.914 30 H 0.126 0.874 31 H 0.113 0.887 32 H 0.242 0.758 33 H 0.102 0.898 34 H 0.093 0.907 35 H 0.251 0.749 36 H 0.116 0.884 37 H 0.119 0.881 38 H 0.145 0.855 39 H 0.135 0.865 40 H 0.259 0.741 41 H -0.192 1.192 42 H -0.239 1.239 43 H 0.200 0.800 44 H 0.126 0.874 45 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -4.689 4.244 -3.524 7.240 hybrid contribution -0.035 1.107 -0.937 1.450 sum -4.723 5.351 -4.460 8.416 Atomic orbital electron populations 1.21828 0.90665 1.04283 1.03738 1.23267 0.96967 0.79363 1.02505 1.86529 1.24278 1.33500 1.83394 1.24023 0.80545 0.92895 0.71009 1.90669 1.61126 1.44142 1.46753 1.22514 0.97046 0.89743 1.02640 0.83879 1.23065 0.93265 0.96798 1.01090 1.22142 0.93498 0.85364 0.91991 1.86559 1.96022 1.14924 1.37221 1.21968 0.99998 0.89280 0.90495 1.45573 1.35389 1.27880 1.27122 1.16953 0.80871 0.82967 0.79869 1.90809 1.34628 1.45001 1.73355 1.21712 0.99546 0.98025 1.00482 1.73409 1.22829 1.01036 1.12933 1.45672 1.23649 1.18901 1.16972 1.22800 0.95395 0.83103 1.05516 1.21159 0.93618 0.97839 0.97464 1.24418 1.13348 0.82693 0.95061 1.86337 1.84737 1.16640 1.48783 0.93378 0.70910 0.91037 0.76993 1.21648 1.04568 0.98503 0.97196 1.23664 0.98344 1.01063 0.94378 0.91281 0.91206 0.88521 0.91340 0.91438 0.87415 0.88742 0.75807 0.89832 0.90695 0.74926 0.88445 0.88139 0.85547 0.86518 0.74057 1.19158 1.23900 0.79988 0.87436 0.88450 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.43 10.29 71.98 0.74 1.17 16 2 C 0.05 0.10 6.19 71.98 0.45 0.55 16 3 O -0.36 -1.66 10.22 -51.41 -0.53 -2.19 16 4 C 0.47 2.58 7.49 71.23 0.53 3.12 16 5 O -0.54 -6.17 15.65 21.95 0.34 -5.83 16 6 C -0.10 0.03 4.19 -11.01 -0.05 -0.02 16 7 H 0.14 -0.36 8.14 -2.39 -0.02 -0.38 16 8 C -0.10 -0.02 6.80 31.12 0.21 0.19 16 9 C 0.11 -0.24 1.48 -10.26 -0.02 -0.25 16 10 O -0.54 1.09 13.40 -148.98 -2.00 -0.90 16 11 C 0.11 0.07 5.32 86.38 0.46 0.53 16 12 N -0.71 -0.74 5.35 -466.09 -2.49 -3.23 16 13 C 0.61 4.75 7.83 86.75 0.68 5.43 16 14 O -0.56 -8.08 16.93 -3.95 -0.07 -8.15 16 15 C -0.04 -0.26 7.13 42.46 0.30 0.04 16 16 N -0.26 -1.13 11.67 -48.18 -0.56 -1.70 16 17 N -0.26 -0.46 3.70 -355.94 -1.32 -1.78 16 18 C 0.07 -0.36 11.00 127.77 1.41 1.05 16 19 C 0.02 0.03 6.21 41.40 0.26 0.29 16 20 C -0.05 0.25 2.98 71.24 0.21 0.46 16 21 O -0.55 3.56 9.75 -148.98 -1.45 2.11 16 22 Si 0.77 -3.18 31.23 68.60 2.14 -1.04 16 23 C -0.19 -0.77 9.35 22.41 0.21 -0.56 16 24 C -0.14 0.45 7.02 31.12 0.22 0.67 16 25 H 0.07 -0.20 8.14 -2.38 -0.02 -0.21 16 26 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 27 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 28 H 0.07 0.15 8.13 -2.39 -0.02 0.13 16 29 H 0.07 0.16 8.13 -2.39 -0.02 0.15 16 30 H 0.11 0.20 7.39 -2.39 -0.02 0.18 16 31 H 0.09 0.02 8.14 -2.39 -0.02 0.00 16 32 H 0.39 -2.98 7.33 -74.06 -0.54 -3.52 16 33 H 0.08 0.14 7.94 -2.39 -0.02 0.12 16 34 H 0.07 0.23 8.14 -2.39 -0.02 0.22 16 35 H 0.41 -1.44 6.76 -92.71 -0.63 -2.07 16 36 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 37 H 0.10 -0.67 8.14 -2.38 -0.02 -0.69 16 38 H 0.13 -0.76 5.19 -2.39 -0.01 -0.77 16 39 H 0.12 -1.23 7.96 -2.39 -0.02 -1.25 16 40 H 0.41 -5.88 8.74 -74.06 -0.65 -6.52 16 41 H -0.27 0.54 7.11 99.48 0.71 1.24 16 42 H -0.31 -1.91 7.11 99.48 0.71 -1.20 16 43 H 0.18 0.08 7.02 -2.91 -0.02 0.06 16 44 H 0.11 -0.67 8.14 -2.39 -0.02 -0.69 16 45 H 0.10 -0.24 7.92 -2.39 -0.02 -0.26 16 Total: 0.00 -26.10 381.19 -1.04 -27.14 By element: Atomic # 1 Polarization: -16.38 SS G_CDS: -0.72 Total: -17.10 kcal Atomic # 6 Polarization: 7.05 SS G_CDS: 5.61 Total: 12.66 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -4.37 Total: -6.71 kcal Atomic # 8 Polarization: -11.26 SS G_CDS: -3.70 Total: -14.95 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: 2.14 Total: -1.04 kcal Total: -26.10 -1.04 -27.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16466198_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.387 kcal (2) G-P(sol) polarization free energy of solvation -26.102 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.036 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds