Wall clock time and date at job start Thu Mar 4 2021 17:12:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.42898 * 114.00200 * 2 1 4 4 H 1.09003 * 112.85050 * 341.20542 * 3 2 1 5 5 C 1.53779 * 113.61353 * 112.50418 * 3 2 1 6 6 C 1.53777 * 87.08350 * 139.98263 * 5 3 2 7 7 H 1.09001 * 113.69152 * 89.12439 * 6 5 3 8 8 C 1.52995 * 113.61911 * 220.01930 * 6 5 3 9 9 C 1.52998 * 109.47533 * 272.49669 * 8 6 5 10 10 N 1.46493 * 109.47616 * 179.97438 * 9 8 6 11 11 C 1.34771 * 120.00418 * 179.97438 * 10 9 8 12 12 O 1.21597 * 119.99888 * 0.02562 * 11 10 9 13 13 C 1.47572 * 120.00453 * 180.02562 * 11 10 9 14 14 C 1.36500 * 120.01349 * 180.02562 * 13 11 10 15 15 N 1.35942 * 120.50680 * 180.27996 * 14 13 11 16 16 C 1.36997 * 132.41608 * 179.70141 * 15 14 13 17 17 C 1.50705 * 126.42579 * 0.02562 * 16 15 14 18 18 O 1.42893 * 109.47194 * 329.99964 * 17 16 15 19 19 Si 1.86305 * 109.46978 * 209.99956 * 17 16 15 20 20 C 1.35008 * 107.14788 * 180.02562 * 16 15 14 21 21 N 1.33594 * 108.64804 * 359.46875 * 20 16 15 22 22 C 1.32410 * 109.22110 * 0.63838 * 21 20 16 23 23 C 1.41260 * 132.11296 * 179.28467 * 22 21 20 24 24 Br 1.89098 * 120.25585 * 359.97438 * 23 22 21 25 25 C 1.35697 * 119.48776 * 179.97438 * 23 22 21 26 26 C 1.53778 * 113.61651 * 210.00150 * 3 2 1 27 27 H 1.09000 * 109.47316 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.46627 * 299.99416 * 1 2 3 29 29 H 1.08994 * 109.47332 * 59.99238 * 1 2 3 30 30 H 1.08999 * 113.61873 * 25.43586 * 5 3 2 31 31 H 1.09001 * 113.62021 * 254.53352 * 5 3 2 32 32 H 1.08998 * 109.47570 * 152.49330 * 8 6 5 33 33 H 1.09000 * 109.46993 * 32.49582 * 8 6 5 34 34 H 1.09006 * 109.46821 * 59.99577 * 9 8 6 35 35 H 1.09000 * 109.46910 * 299.99964 * 9 8 6 36 36 H 0.97006 * 119.99608 * 0.02562 * 10 9 8 37 37 H 1.08002 * 119.74245 * 359.97438 * 14 13 11 38 38 H 1.09001 * 109.46708 * 90.00281 * 17 16 15 39 39 H 0.96703 * 114.00145 * 180.02562 * 18 17 16 40 40 H 1.48504 * 109.99661 * 298.68248 * 19 17 16 41 41 H 1.48498 * 109.99929 * 60.00224 * 19 17 16 42 42 H 1.07991 * 125.67808 * 180.02562 * 20 16 15 43 43 H 1.08000 * 120.23762 * 179.97438 * 25 23 22 44 44 H 1.09003 * 113.61240 * 105.47086 * 26 3 2 45 45 H 1.08997 * 113.61492 * 334.56915 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3137 2.0789 -0.3236 5 6 2.7535 1.6488 1.3017 6 6 3.8228 2.3180 0.4223 7 1 3.6236 3.3693 0.2144 8 6 5.2543 2.0679 0.9006 9 6 5.6427 3.1337 1.9272 10 7 7.0132 2.8939 2.3857 11 6 7.5720 3.7138 3.2977 12 8 6.9384 4.6525 3.7404 13 6 8.9528 3.4725 3.7591 14 6 9.5188 4.3026 4.6833 15 7 10.7919 4.0930 5.1111 16 6 11.5878 4.7593 6.0053 17 6 11.2127 5.9863 6.7958 18 8 10.2688 6.7610 6.0536 19 14 12.7374 7.0073 7.1182 20 6 12.7711 4.1105 6.0454 21 7 12.7143 3.0665 5.2138 22 6 11.5260 3.0382 4.6302 23 6 10.9612 2.1660 3.6733 24 35 11.9659 0.7136 2.9975 25 6 9.6920 2.3785 3.2428 26 6 3.3755 1.3719 -0.7045 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 3.1168 0.7739 1.8410 31 1 2.2142 2.3475 1.9413 32 1 5.9352 2.1168 0.0508 33 1 5.3168 1.0813 1.3598 34 1 4.9618 3.0848 2.7771 35 1 5.5803 4.1203 1.4680 36 1 7.5188 2.1452 2.0322 37 1 8.9524 5.1351 5.0738 38 1 10.7695 5.6854 7.7451 39 1 9.9824 7.5680 6.5029 40 1 13.7139 6.2236 7.9167 41 1 13.3511 7.4238 5.8317 42 1 13.6191 4.3842 6.6555 43 1 9.2483 1.7195 2.5112 44 1 3.3383 1.8471 -1.6848 45 1 3.9088 0.4213 -0.7138 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16488024_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:12:26 Heat of formation + Delta-G solvation = 12.467808 kcal Electronic energy + Delta-G solvation = -29531.646638 eV Core-core repulsion = 25178.652935 eV Total energy + Delta-G solvation = -4352.993703 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.067 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.37297 -41.24208 -40.47070 -38.57474 -37.92847 -37.55023 -36.17611 -35.37489 -33.01275 -32.09450 -31.38104 -30.32531 -27.77205 -26.94522 -26.72257 -26.28690 -24.63455 -24.19839 -22.59623 -22.56931 -21.86463 -20.48205 -19.25824 -18.84134 -18.62035 -17.98951 -17.63401 -17.50876 -17.05636 -16.75113 -16.53279 -16.17556 -16.10029 -15.96946 -15.66062 -15.56675 -15.41508 -15.09850 -14.82719 -14.65895 -14.21849 -13.64796 -13.51418 -13.40587 -13.36132 -13.32919 -13.12765 -12.97762 -12.82779 -12.39285 -12.26218 -12.10380 -11.73947 -11.70542 -11.65571 -11.47391 -11.42501 -11.27726 -11.16339 -10.77621 -10.39502 -10.31721 -10.07696 -9.15750 -5.00935 -0.97356 -0.46182 0.11348 0.88819 1.07390 1.38725 1.63070 1.67393 1.93951 2.01308 2.16872 2.67269 2.89669 2.97036 3.13528 3.30434 3.36319 3.48324 3.51051 3.65251 3.81521 3.84078 3.91555 3.96572 4.10659 4.23337 4.27932 4.28460 4.31567 4.38174 4.44124 4.47872 4.53251 4.63896 4.68943 4.83334 4.86173 4.87512 4.89078 4.99709 5.03276 5.08611 5.13737 5.26905 5.30520 5.46873 5.48449 6.28130 6.31067 6.32046 6.73648 6.94122 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.404 6.404 3 C 0.047 3.953 4 H 0.095 0.905 5 C -0.153 4.153 6 C -0.098 4.098 7 H 0.104 0.896 8 C -0.112 4.112 9 C 0.121 3.879 10 N -0.707 5.707 11 C 0.578 3.422 12 O -0.564 6.564 13 C -0.173 4.173 14 C 0.169 3.831 15 N -0.358 5.358 16 C -0.045 4.045 17 C -0.052 4.052 18 O -0.570 6.570 19 Si 0.822 3.178 20 C 0.016 3.984 21 N -0.494 5.494 22 C 0.224 3.776 23 C -0.085 4.085 24 Br 0.008 6.992 25 C -0.019 4.019 26 C -0.130 4.130 27 H 0.090 0.910 28 H 0.046 0.954 29 H 0.049 0.951 30 H 0.084 0.916 31 H 0.071 0.929 32 H 0.087 0.913 33 H 0.079 0.921 34 H 0.064 0.936 35 H 0.068 0.932 36 H 0.415 0.585 37 H 0.196 0.804 38 H 0.110 0.890 39 H 0.415 0.585 40 H -0.271 1.271 41 H -0.309 1.309 42 H 0.201 0.799 43 H 0.189 0.811 44 H 0.079 0.921 45 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.563 3.117 0.637 5.563 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 O -0.323 6.323 3 C -0.010 4.010 4 H 0.113 0.887 5 C -0.191 4.191 6 C -0.116 4.116 7 H 0.122 0.878 8 C -0.149 4.149 9 C -0.002 4.002 10 N -0.359 5.359 11 C 0.364 3.636 12 O -0.444 6.444 13 C -0.181 4.181 14 C 0.043 3.957 15 N -0.030 5.030 16 C -0.156 4.156 17 C -0.160 4.160 18 O -0.382 6.382 19 Si 0.725 3.275 20 C -0.133 4.133 21 N -0.213 5.213 22 C -0.022 4.022 23 C -0.167 4.167 24 Br 0.093 6.907 25 C -0.045 4.045 26 C -0.168 4.168 27 H 0.108 0.892 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.102 0.898 31 H 0.090 0.910 32 H 0.106 0.894 33 H 0.098 0.902 34 H 0.083 0.917 35 H 0.086 0.914 36 H 0.254 0.746 37 H 0.213 0.787 38 H 0.128 0.872 39 H 0.269 0.731 40 H -0.198 1.198 41 H -0.237 1.237 42 H 0.218 0.782 43 H 0.207 0.793 44 H 0.098 0.902 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -2.957 2.136 0.092 3.649 hybrid contribution -0.899 0.089 0.003 0.904 sum -3.856 2.225 0.095 4.453 Atomic orbital electron populations 1.22916 0.80176 1.03487 1.00602 1.87908 1.20934 1.28691 1.94782 1.23949 0.94512 0.84916 0.97650 0.88674 1.23601 0.97775 1.00770 0.96928 1.22185 0.93559 0.99760 0.96145 0.87775 1.21697 0.96294 0.98484 0.98448 1.21478 0.80926 0.99840 0.97921 1.45757 1.16585 1.31265 1.42269 1.17472 0.84499 0.82193 0.79398 1.90837 1.63863 1.31539 1.58210 1.19332 0.96715 0.99233 1.02814 1.22298 0.82268 0.98646 0.92498 1.42726 1.10889 1.20609 1.28819 1.21692 0.92502 1.00361 1.01027 1.24728 1.05782 0.90730 0.94781 1.86326 1.62452 1.41162 1.48242 0.94110 0.72370 0.82079 0.78976 1.22676 0.97159 0.93169 1.00260 1.70782 1.16533 1.21927 1.12086 1.20772 0.89515 0.91496 1.00367 1.20572 0.96637 0.98221 1.01296 1.96827 1.72803 1.37210 1.83845 1.21413 0.90463 0.95337 0.97248 1.23271 0.94794 1.00272 0.98460 0.89176 0.93483 0.93198 0.89784 0.91010 0.89399 0.90214 0.91737 0.91354 0.74647 0.78721 0.87241 0.73117 1.19754 1.23723 0.78189 0.79344 0.90196 0.89464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 10.85 113.37 1.23 1.20 16 2 O -0.40 -1.47 10.71 -148.98 -1.60 -3.06 16 3 C 0.05 -0.05 4.31 31.12 0.13 0.08 16 4 H 0.10 -0.32 7.87 -2.39 -0.02 -0.33 16 5 C -0.15 0.44 7.46 31.12 0.23 0.67 16 6 C -0.10 0.57 3.65 -10.27 -0.04 0.53 16 7 H 0.10 -0.72 8.13 -2.39 -0.02 -0.74 16 8 C -0.11 0.86 5.16 30.59 0.16 1.02 16 9 C 0.12 -0.50 5.66 86.38 0.49 -0.01 16 10 N -0.71 2.75 5.51 -466.24 -2.57 0.19 16 11 C 0.58 1.53 7.76 86.71 0.67 2.20 16 12 O -0.56 -5.58 16.27 -4.02 -0.07 -5.65 16 13 C -0.17 -0.38 5.84 -20.35 -0.12 -0.50 16 14 C 0.17 0.87 9.91 83.65 0.83 1.70 16 15 N -0.36 -2.82 2.93 -337.70 -0.99 -3.81 16 16 C -0.04 -0.27 6.28 41.01 0.26 -0.01 16 17 C -0.05 0.14 3.05 71.24 0.22 0.36 16 18 O -0.57 1.80 10.88 -148.98 -1.62 0.18 16 19 Si 0.82 -4.07 31.28 68.60 2.15 -1.93 16 20 C 0.02 0.13 10.44 83.68 0.87 1.01 16 21 N -0.49 -6.33 11.30 -194.10 -2.19 -8.52 16 22 C 0.22 2.29 7.59 134.19 1.02 3.31 16 23 C -0.08 -0.46 6.24 22.42 0.14 -0.32 16 24 Br 0.01 0.04 33.72 -20.37 -0.69 -0.65 16 25 C -0.02 0.01 9.26 22.55 0.21 0.22 16 26 C -0.13 0.47 7.47 31.12 0.23 0.70 16 27 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 28 H 0.05 -0.12 8.14 -2.38 -0.02 -0.13 16 29 H 0.05 -0.15 8.14 -2.39 -0.02 -0.17 16 30 H 0.08 -0.10 7.90 -2.39 -0.02 -0.12 16 31 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 32 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 33 H 0.08 -0.64 7.84 -2.39 -0.02 -0.66 16 34 H 0.06 -0.11 8.14 -2.38 -0.02 -0.12 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 36 H 0.42 -4.04 6.51 -92.70 -0.60 -4.64 16 37 H 0.20 0.88 6.19 -2.91 -0.02 0.86 16 38 H 0.11 -0.82 7.96 -2.39 -0.02 -0.83 16 39 H 0.42 -5.81 8.74 -74.06 -0.65 -6.46 16 40 H -0.27 0.38 6.91 99.48 0.69 1.07 16 41 H -0.31 -1.53 7.11 99.48 0.71 -0.83 16 42 H 0.20 0.67 6.77 -2.92 -0.02 0.65 16 43 H 0.19 -1.61 6.44 -2.91 -0.02 -1.63 16 44 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 45 H 0.09 -0.20 8.10 -2.39 -0.02 -0.22 16 Total: 0.00 -26.12 395.14 -1.22 -27.34 By element: Atomic # 1 Polarization: -16.07 SS G_CDS: -0.18 Total: -16.25 kcal Atomic # 6 Polarization: 5.63 SS G_CDS: 6.54 Total: 12.17 kcal Atomic # 7 Polarization: -6.39 SS G_CDS: -5.75 Total: -12.14 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -3.28 Total: -8.53 kcal Atomic # 14 Polarization: -4.07 SS G_CDS: 2.15 Total: -1.93 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -26.12 -1.22 -27.34 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16488024_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.805 kcal (2) G-P(sol) polarization free energy of solvation -26.117 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.220 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.337 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds