Wall clock time and date at job start Thu Mar 4 2021 14:07:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28469 * 124.88929 * 2 1 4 4 C 1.31808 * 110.07386 * 180.02562 * 3 2 1 5 5 C 1.47707 * 126.51535 * 180.02562 * 4 3 2 6 6 O 1.21569 * 120.00373 * 180.02562 * 5 4 3 7 7 N 1.34782 * 120.00420 * 0.02562 * 5 4 3 8 8 C 1.46493 * 120.00325 * 180.02562 * 7 5 4 9 9 C 1.52997 * 109.47228 * 180.02562 * 8 7 5 10 10 H 1.09002 * 109.47497 * 54.99778 * 9 8 7 11 11 C 1.53002 * 109.47415 * 175.00130 * 9 8 7 12 12 C 1.53000 * 109.47233 * 180.02562 * 11 9 8 13 13 C 1.52997 * 109.47060 * 299.99657 * 12 11 9 14 14 H 1.09002 * 109.47153 * 300.00319 * 13 12 11 15 15 C 1.47202 * 109.47534 * 180.02562 * 13 12 11 16 16 N 9.69378 * 126.96623 * 171.25251 * 3 1 2 17 17 C 1.52999 * 109.47317 * 59.99960 * 13 12 11 18 18 C 1.52997 * 109.47232 * 295.00003 * 9 8 7 19 19 C 1.41494 * 106.96595 * 0.26254 * 4 3 2 20 20 C 1.35034 * 124.88078 * 180.02562 * 2 1 3 21 21 C 1.50698 * 126.38953 * 359.97438 * 20 2 1 22 22 O 1.42898 * 109.46960 * 29.99918 * 21 20 2 23 23 Si 1.86295 * 109.47465 * 150.00135 * 21 20 2 24 24 H 1.09003 * 109.47209 * 89.96803 * 1 2 3 25 25 H 1.08998 * 109.47023 * 209.97256 * 1 2 3 26 26 H 1.09004 * 109.46476 * 329.97004 * 1 2 3 27 27 H 0.97003 * 119.99405 * 0.02562 * 7 5 4 28 28 H 1.09000 * 109.47277 * 60.00341 * 8 7 5 29 29 H 1.09001 * 109.47111 * 300.00156 * 8 7 5 30 30 H 1.08992 * 109.47063 * 59.99950 * 11 9 8 31 31 H 1.09004 * 109.46733 * 299.99664 * 11 9 8 32 32 H 1.09002 * 109.47398 * 59.99826 * 12 11 9 33 33 H 1.09001 * 109.47194 * 180.02562 * 12 11 9 34 34 H 1.09000 * 109.47486 * 180.02562 * 17 13 12 35 35 H 1.09002 * 109.46716 * 60.00091 * 17 13 12 36 36 H 1.09002 * 109.47153 * 299.99992 * 18 9 8 37 37 H 1.09001 * 109.47289 * 60.00075 * 18 9 8 38 38 H 1.08003 * 127.24876 * 179.74369 * 19 4 3 39 39 H 1.09001 * 109.46864 * 270.00049 * 21 20 2 40 40 H 0.96698 * 114.00225 * 60.00216 * 22 21 20 41 41 H 1.48501 * 110.00123 * 179.97438 * 23 21 20 42 42 H 1.48496 * 109.99981 * 301.31980 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7167 -0.0006 5 6 4.6273 1.6396 -0.0002 6 8 5.7598 1.1975 -0.0013 7 7 4.4243 2.9721 0.0013 8 6 5.5681 3.8874 0.0011 9 6 5.0650 5.3323 0.0036 10 1 4.3899 5.4806 0.8464 11 6 6.2546 6.2863 0.1290 12 6 5.7514 7.7312 0.1322 13 6 5.0060 8.0145 -1.1735 14 1 5.6809 7.8666 -2.0166 15 6 4.5224 9.4048 -1.1708 16 7 4.1499 10.4760 -1.1779 17 6 3.8165 7.0606 -1.2991 18 6 4.3200 5.6152 -1.3024 19 6 3.5272 -0.6972 -0.0071 20 6 2.2372 -1.1077 -0.0005 21 6 1.7533 -2.5349 -0.0006 22 8 0.4951 -2.6112 -0.6738 23 14 2.9941 -3.6114 -0.8794 24 1 -0.3634 0.0006 -1.0277 25 1 -0.3633 -0.8902 0.5134 26 1 -0.3632 0.8898 0.5143 27 1 3.5207 3.3249 0.0025 28 1 6.1719 3.7141 -0.8897 29 1 6.1737 3.7123 0.8903 30 1 6.9296 6.1381 -0.7138 31 1 6.7853 6.0848 1.0596 32 1 5.0765 7.8791 0.9753 33 1 6.5989 8.4109 0.2211 34 1 3.2857 7.2621 -2.2296 35 1 3.1416 7.2085 -0.4560 36 1 4.9950 5.4670 -2.1453 37 1 3.4724 4.9356 -1.3918 38 1 4.4108 -1.3182 -0.0132 39 1 1.6370 -2.8792 1.0271 40 1 0.5238 -2.3196 -1.5953 41 1 2.5288 -5.0216 -0.8858 42 1 3.1854 -3.1328 -2.2721 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16496578_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 14:07:55 Heat of formation + Delta-G solvation = 24.623778 kcal Electronic energy + Delta-G solvation = -24426.820357 eV Core-core repulsion = 20795.654201 eV Total energy + Delta-G solvation = -3631.166156 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.153 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -43.80608 -40.75335 -39.80049 -38.14976 -37.52783 -35.74439 -34.40018 -32.87972 -32.26387 -31.67961 -28.80898 -27.35590 -26.51439 -24.26050 -23.63888 -22.68952 -22.12530 -21.11834 -20.56680 -19.18536 -18.66958 -17.62510 -17.50246 -17.19212 -16.83451 -16.48419 -15.99122 -15.78376 -15.63950 -15.27678 -15.11846 -14.89713 -14.81771 -14.65797 -14.27198 -14.10345 -14.05994 -13.66780 -13.38322 -13.36410 -13.11790 -13.04712 -12.68671 -12.65449 -12.25221 -12.00017 -11.97713 -11.94961 -11.54809 -11.35452 -11.14319 -11.05245 -10.97011 -10.26889 -9.94577 -9.94114 -4.87053 0.48582 0.85455 1.25152 1.57236 1.69555 1.76267 1.79288 1.96673 2.21109 2.36568 2.93617 3.11718 3.36001 3.38433 3.75740 3.79496 3.81317 4.03991 4.14078 4.28935 4.31440 4.38348 4.39898 4.47370 4.48731 4.52784 4.55974 4.61298 4.67456 4.72478 4.79140 4.85501 4.96893 5.04191 5.19006 5.21195 5.28720 5.29901 5.31267 5.42157 5.47134 5.61699 5.70012 6.29557 6.44458 6.57948 6.85558 7.18321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.266 5.266 3 N -0.265 5.265 4 C -0.039 4.039 5 C 0.601 3.399 6 O -0.567 6.567 7 N -0.706 5.706 8 C 0.122 3.878 9 C -0.093 4.093 10 H 0.085 0.915 11 C -0.105 4.105 12 C -0.107 4.107 13 C 0.010 3.990 14 H 0.138 0.862 15 C 0.237 3.763 16 N -0.505 5.505 17 C -0.107 4.107 18 C -0.110 4.110 19 C -0.188 4.188 20 C -0.014 4.014 21 C -0.045 4.045 22 O -0.538 6.538 23 Si 0.783 3.217 24 H 0.100 0.900 25 H 0.115 0.885 26 H 0.101 0.899 27 H 0.414 0.586 28 H 0.069 0.931 29 H 0.065 0.935 30 H 0.083 0.917 31 H 0.078 0.922 32 H 0.070 0.930 33 H 0.078 0.922 34 H 0.074 0.926 35 H 0.071 0.929 36 H 0.079 0.921 37 H 0.070 0.930 38 H 0.181 0.819 39 H 0.145 0.855 40 H 0.388 0.612 41 H -0.285 1.285 42 H -0.294 1.294 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.688 -4.395 0.617 4.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.055 5.055 3 N -0.103 5.103 4 C -0.197 4.197 5 C 0.386 3.614 6 O -0.444 6.444 7 N -0.358 5.358 8 C -0.001 4.001 9 C -0.112 4.112 10 H 0.103 0.897 11 C -0.143 4.143 12 C -0.146 4.146 13 C -0.012 4.012 14 H 0.156 0.844 15 C -0.080 4.080 16 N -0.182 5.182 17 C -0.146 4.146 18 C -0.148 4.148 19 C -0.216 4.216 20 C -0.139 4.139 21 C -0.155 4.155 22 O -0.345 6.345 23 Si 0.686 3.314 24 H 0.118 0.882 25 H 0.133 0.867 26 H 0.120 0.880 27 H 0.250 0.750 28 H 0.088 0.912 29 H 0.084 0.916 30 H 0.102 0.898 31 H 0.097 0.903 32 H 0.089 0.911 33 H 0.096 0.904 34 H 0.093 0.907 35 H 0.089 0.911 36 H 0.097 0.903 37 H 0.089 0.911 38 H 0.198 0.802 39 H 0.162 0.838 40 H 0.238 0.762 41 H -0.212 1.212 42 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -2.344 -2.872 0.514 3.742 hybrid contribution -0.762 -0.156 -0.701 1.047 sum -3.106 -3.028 -0.187 4.342 Atomic orbital electron populations 1.22595 0.70839 1.06667 1.05980 1.45680 1.08946 1.01946 1.48924 1.73455 1.02733 1.14679 1.19414 1.21874 0.90954 0.94536 1.12377 1.17015 0.86234 0.82259 0.75866 1.90792 1.23791 1.77846 1.52000 1.45828 1.11574 1.04703 1.73673 1.21550 0.87791 0.88231 1.02493 1.21410 0.98435 0.92003 0.99370 0.89661 1.21464 0.96771 0.92038 1.04066 1.21533 1.00250 0.97795 0.95012 1.19270 0.98928 0.80136 1.02832 0.84409 1.29888 0.91759 0.95201 0.91178 1.81221 1.11168 1.14958 1.10847 1.21540 0.95818 0.93812 1.03436 1.21594 1.00597 0.94992 0.97600 1.21729 0.97383 0.93642 1.08834 1.22164 0.91040 0.92046 1.08651 1.24841 0.93385 0.92161 1.05090 1.86580 1.29332 1.88577 1.30054 0.93220 0.83957 0.74708 0.79533 0.88194 0.86655 0.88012 0.74955 0.91242 0.91617 0.89832 0.90324 0.91134 0.90356 0.90707 0.91051 0.90255 0.91128 0.80159 0.83763 0.76207 1.21218 1.22023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.59 10.12 127.77 1.29 0.70 16 2 N -0.27 0.19 3.70 -355.92 -1.32 -1.12 16 3 N -0.26 -0.74 11.67 -48.18 -0.56 -1.31 16 4 C -0.04 -0.20 7.13 42.45 0.30 0.11 16 5 C 0.60 3.82 7.83 86.74 0.68 4.49 16 6 O -0.57 -7.24 16.93 -3.93 -0.07 -7.31 16 7 N -0.71 0.34 5.28 -466.12 -2.46 -2.12 16 8 C 0.12 -0.45 5.06 86.38 0.44 -0.01 16 9 C -0.09 0.83 2.22 -10.79 -0.02 0.81 16 10 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 11 C -0.11 1.07 5.20 30.60 0.16 1.22 16 12 C -0.11 0.94 5.16 30.59 0.16 1.10 16 13 C 0.01 -0.07 2.56 -12.60 -0.03 -0.11 16 14 H 0.14 -1.60 8.14 -2.39 -0.02 -1.62 16 15 C 0.24 0.38 14.64 89.46 1.31 1.69 16 16 N -0.51 -5.13 18.52 19.98 0.37 -4.76 16 17 C -0.11 0.92 5.16 30.61 0.16 1.08 16 18 C -0.11 1.05 5.08 30.61 0.16 1.20 16 19 C -0.19 -0.41 9.35 22.41 0.21 -0.20 16 20 C -0.01 0.02 6.18 41.40 0.26 0.27 16 21 C -0.04 0.24 2.87 71.24 0.20 0.44 16 22 O -0.54 2.85 10.40 -148.98 -1.55 1.30 16 23 Si 0.78 -3.36 31.22 68.60 2.14 -1.21 16 24 H 0.10 -1.04 8.14 -2.39 -0.02 -1.06 16 25 H 0.12 -1.01 6.77 -2.39 -0.02 -1.02 16 26 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 27 H 0.41 -1.45 7.38 -92.71 -0.68 -2.14 16 28 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 30 H 0.08 -0.94 8.14 -2.39 -0.02 -0.96 16 31 H 0.08 -0.77 8.14 -2.39 -0.02 -0.79 16 32 H 0.07 -0.54 8.14 -2.39 -0.02 -0.56 16 33 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 34 H 0.07 -0.60 8.14 -2.39 -0.02 -0.62 16 35 H 0.07 -0.55 8.14 -2.39 -0.02 -0.56 16 36 H 0.08 -0.79 8.14 -2.39 -0.02 -0.81 16 37 H 0.07 -0.62 7.18 -2.39 -0.02 -0.63 16 38 H 0.18 -0.18 7.01 -2.91 -0.02 -0.20 16 39 H 0.14 -1.16 7.96 -2.39 -0.02 -1.18 16 40 H 0.39 -3.77 8.70 -74.06 -0.64 -4.41 16 41 H -0.29 -0.49 7.11 99.48 0.71 0.21 16 42 H -0.29 -0.62 7.11 99.48 0.71 0.09 16 Total: 0.00 -24.28 351.36 1.58 -22.70 By element: Atomic # 1 Polarization: -18.73 SS G_CDS: -0.24 Total: -18.97 kcal Atomic # 6 Polarization: 7.53 SS G_CDS: 5.27 Total: 12.80 kcal Atomic # 7 Polarization: -5.34 SS G_CDS: -3.97 Total: -9.31 kcal Atomic # 8 Polarization: -4.39 SS G_CDS: -1.62 Total: -6.00 kcal Atomic # 14 Polarization: -3.36 SS G_CDS: 2.14 Total: -1.21 kcal Total: -24.28 1.58 -22.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16496578_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.323 kcal (2) G-P(sol) polarization free energy of solvation -24.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.699 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.624 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds