Wall clock time and date at job start Thu Mar 4 2021 15:23:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52996 * 109.46998 * 2 1 4 4 C 1.52999 * 109.47193 * 239.99553 * 2 1 3 5 5 O 1.45203 * 109.47194 * 119.99844 * 2 1 3 6 6 C 1.34641 * 116.99779 * 59.99873 * 5 2 1 7 7 O 1.21508 * 120.00198 * 0.02562 * 6 5 2 8 8 N 1.34781 * 119.99778 * 179.97438 * 6 5 2 9 9 C 1.46502 * 119.99747 * 180.02562 * 8 6 5 10 10 C 1.53000 * 109.46853 * 179.97438 * 9 8 6 11 11 H 1.09011 * 112.84841 * 43.80697 * 10 9 8 12 12 C 1.53779 * 113.61445 * 174.99763 * 10 9 8 13 13 C 1.53781 * 87.07781 * 89.11940 * 12 10 9 14 14 F 1.39891 * 113.61705 * 270.80042 * 13 12 10 15 15 C 1.53000 * 113.61448 * 139.98172 * 13 12 10 16 16 N 1.46499 * 109.47645 * 180.02562 * 15 13 12 17 17 C 1.34769 * 120.00587 * 179.97438 * 16 15 13 18 18 O 1.21517 * 119.99909 * 0.02562 * 17 16 15 19 19 C 1.48173 * 120.00220 * 179.97438 * 17 16 15 20 20 N 1.32711 * 119.72077 * 359.97438 * 19 17 16 21 21 C 1.31529 * 121.64262 * 179.72630 * 20 19 17 22 22 C 1.38560 * 120.89586 * 0.58034 * 21 20 19 23 23 C 1.50707 * 120.31845 * 179.70642 * 22 21 20 24 24 O 1.42903 * 109.46442 * 244.72281 * 23 22 21 25 25 Si 1.86293 * 109.47256 * 4.71847 * 23 22 21 26 26 C 1.38628 * 119.35735 * 359.42780 * 22 21 20 27 27 C 1.38584 * 118.48592 * 0.27743 * 26 22 21 28 28 C 1.53778 * 113.62008 * 272.50160 * 10 9 8 29 29 H 1.09000 * 109.46998 * 299.99382 * 1 2 3 30 30 H 1.08995 * 109.47452 * 60.00323 * 1 2 3 31 31 H 1.09001 * 109.47034 * 180.02562 * 1 2 3 32 32 H 1.09008 * 109.46898 * 180.02562 * 3 2 1 33 33 H 1.09001 * 109.46872 * 299.99687 * 3 2 1 34 34 H 1.08999 * 109.47449 * 60.00220 * 3 2 1 35 35 H 1.09000 * 109.47753 * 300.00563 * 4 2 1 36 36 H 1.09005 * 109.46658 * 60.00267 * 4 2 1 37 37 H 1.08998 * 109.47394 * 179.97438 * 4 2 1 38 38 H 0.96999 * 120.00173 * 0.02562 * 8 6 5 39 39 H 1.09002 * 109.46977 * 60.00644 * 9 8 6 40 40 H 1.08996 * 109.47116 * 299.99884 * 9 8 6 41 41 H 1.09000 * 113.61301 * 334.57574 * 12 10 9 42 42 H 1.09000 * 113.69124 * 203.67833 * 12 10 9 43 43 H 1.09004 * 109.47065 * 59.99730 * 15 13 12 44 44 H 1.09009 * 109.47081 * 300.00045 * 15 13 12 45 45 H 0.97009 * 119.99288 * 359.97438 * 16 15 13 46 46 H 1.07993 * 119.55247 * 180.30865 * 21 20 19 47 47 H 1.08999 * 109.47345 * 124.72351 * 23 22 21 48 48 H 0.96700 * 114.00311 * 60.00230 * 24 23 22 49 49 H 1.48501 * 109.99918 * 58.68485 * 25 23 22 50 50 H 1.48506 * 109.99973 * 180.02562 * 25 23 22 51 51 H 1.07994 * 120.75485 * 180.25276 * 26 22 21 52 52 H 1.08001 * 120.47190 * 179.97438 * 27 26 22 53 53 H 1.08997 * 113.61881 * 156.33455 * 28 10 9 54 54 H 1.09003 * 113.61127 * 25.42883 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1856 6 6 1.6522 -1.9723 1.3384 7 8 0.9516 -2.5097 0.5037 8 7 2.0681 -2.6657 2.4167 9 6 1.6748 -4.0672 2.5827 10 6 2.2759 -4.6154 3.8785 11 1 2.1817 -3.9229 4.7150 12 6 1.8231 -6.0471 4.2101 13 6 3.0250 -6.5345 3.3837 14 9 2.7379 -6.7083 2.0257 15 6 3.7435 -7.7376 3.9978 16 7 4.8678 -8.1242 3.1418 17 6 5.6500 -9.1662 3.4862 18 8 5.4224 -9.7855 4.5067 19 6 6.7868 -9.5575 2.6201 20 7 7.0294 -8.8783 1.5061 21 6 8.0311 -9.1895 0.7125 22 6 8.8684 -10.2534 1.0073 23 6 10.0083 -10.6025 0.0854 24 8 9.7842 -11.8955 -0.4803 25 14 10.1137 -9.3378 -1.2784 26 6 8.6509 -10.9898 2.1615 27 6 7.5917 -10.6355 2.9819 28 6 3.6930 -5.1874 3.7066 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5137 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.1300 1.4425 -0.0005 33 1 1.6766 1.9562 -0.8900 34 1 1.6767 1.9563 0.8900 35 1 1.6767 -1.7490 -1.2493 36 1 1.6767 -0.2075 -2.1392 37 1 3.1300 -0.7210 -1.2494 38 1 2.6277 -2.2368 3.0829 39 1 2.0414 -4.6499 1.7376 40 1 0.5880 -4.1367 2.6280 41 1 0.8589 -6.3117 3.7761 42 1 1.8926 -6.2942 5.2694 43 1 3.0474 -8.5721 4.0828 44 1 4.1154 -7.4724 4.9876 45 1 5.0493 -7.6300 2.3270 46 1 8.2006 -8.6106 -0.1833 47 1 10.9418 -10.6089 0.6481 48 1 8.9690 -11.9633 -0.9961 49 1 10.3148 -7.9843 -0.7014 50 1 11.2337 -9.6713 -2.1948 51 1 9.2921 -11.8209 2.4153 52 1 7.3927 -11.1875 3.8886 53 1 4.2743 -5.1982 4.6285 54 1 4.2382 -4.7579 2.8661 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16498492_13287726.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:23:16 Heat of formation + Delta-G solvation = -131.757274 kcal Electronic energy + Delta-G solvation = -37027.876932 eV Core-core repulsion = 31881.924280 eV Total energy + Delta-G solvation = -5145.952653 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.194 amu Computer time = 1.98 seconds Orbital eigenvalues (eV) -48.88987 -41.90628 -41.82653 -40.43702 -39.80741 -38.25065 -37.88051 -36.19236 -35.52668 -34.70621 -33.82273 -33.01651 -30.39015 -28.38057 -28.31540 -28.16848 -27.07832 -26.80295 -25.05425 -23.98760 -23.29470 -22.81943 -21.89644 -21.25678 -20.25590 -19.52316 -19.03433 -18.61460 -17.98247 -17.73937 -17.40960 -17.15612 -17.07340 -16.91053 -16.56456 -16.49159 -16.20583 -16.04036 -15.95971 -15.74196 -15.55025 -15.46341 -15.03737 -14.81301 -14.64990 -14.50840 -14.37116 -14.25951 -14.15343 -13.98081 -13.63947 -13.58124 -13.35986 -13.22891 -13.03356 -12.92734 -12.87736 -12.56100 -12.54435 -12.41466 -12.28285 -12.20434 -12.05756 -11.66928 -11.41030 -11.31873 -11.28101 -11.10276 -11.08532 -10.70059 -10.59198 -10.42629 -10.23345 -10.16528 -5.01805 -0.63226 0.05389 1.13722 1.23231 1.48445 1.62187 1.73795 1.84540 1.95632 2.63188 2.88045 3.03828 3.14391 3.22310 3.27376 3.41360 3.42799 3.50313 3.58867 3.66118 3.73448 3.77153 3.78436 3.92363 3.93337 3.95935 4.10533 4.32041 4.39412 4.42949 4.50521 4.54065 4.55826 4.59239 4.60122 4.68590 4.70487 4.75298 4.77156 4.83617 4.85091 4.86680 4.89253 4.95501 4.96629 5.01114 5.09204 5.16898 5.24913 5.26020 5.30878 5.35043 5.35971 5.57520 6.16933 6.37467 6.55001 6.69531 6.94098 7.32332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.137 4.137 4 C -0.180 4.180 5 O -0.369 6.369 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.697 5.697 9 C 0.148 3.852 10 C -0.115 4.115 11 H 0.122 0.878 12 C -0.130 4.130 13 C 0.071 3.929 14 F -0.198 7.198 15 C 0.109 3.891 16 N -0.701 5.701 17 C 0.571 3.429 18 O -0.562 6.562 19 C 0.062 3.938 20 N -0.462 5.462 21 C 0.101 3.899 22 C -0.142 4.142 23 C -0.067 4.067 24 O -0.550 6.550 25 Si 0.768 3.232 26 C -0.053 4.053 27 C -0.113 4.113 28 C -0.143 4.143 29 H 0.062 0.938 30 H 0.087 0.913 31 H 0.062 0.938 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.070 0.930 35 H 0.062 0.938 36 H 0.087 0.913 37 H 0.062 0.938 38 H 0.418 0.582 39 H 0.064 0.936 40 H 0.067 0.933 41 H 0.086 0.914 42 H 0.135 0.865 43 H 0.076 0.924 44 H 0.105 0.895 45 H 0.418 0.582 46 H 0.186 0.814 47 H 0.121 0.879 48 H 0.397 0.603 49 H -0.279 1.279 50 H -0.295 1.295 51 H 0.162 0.838 52 H 0.151 0.849 53 H 0.126 0.874 54 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.236 3.348 0.732 3.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.194 4.194 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.357 5.357 9 C 0.026 3.974 10 C -0.134 4.134 11 H 0.140 0.860 12 C -0.169 4.169 13 C 0.052 3.948 14 F -0.179 7.179 15 C -0.015 4.015 16 N -0.352 5.352 17 C 0.356 3.644 18 O -0.441 6.441 19 C -0.075 4.075 20 N -0.173 5.173 21 C -0.058 4.058 22 C -0.144 4.144 23 C -0.178 4.178 24 O -0.358 6.358 25 Si 0.673 3.327 26 C -0.079 4.079 27 C -0.134 4.134 28 C -0.180 4.180 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.081 0.919 32 H 0.088 0.912 33 H 0.117 0.883 34 H 0.089 0.911 35 H 0.081 0.919 36 H 0.106 0.894 37 H 0.081 0.919 38 H 0.255 0.745 39 H 0.083 0.917 40 H 0.086 0.914 41 H 0.105 0.895 42 H 0.153 0.847 43 H 0.094 0.906 44 H 0.123 0.877 45 H 0.255 0.745 46 H 0.202 0.798 47 H 0.138 0.862 48 H 0.248 0.752 49 H -0.206 1.206 50 H -0.222 1.222 51 H 0.180 0.820 52 H 0.169 0.831 53 H 0.144 0.856 54 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 1.136 3.913 0.697 4.133 hybrid contribution 0.910 -0.777 0.337 1.243 sum 2.046 3.136 1.034 3.885 Atomic orbital electron populations 1.22474 0.94068 1.03644 1.03552 1.22355 0.94461 0.92607 0.81501 1.21890 1.02463 0.90798 1.04276 1.22475 1.01651 1.02206 0.97418 1.86307 1.71541 1.23215 1.47267 1.18360 0.78834 0.80829 0.82523 1.90916 1.42346 1.71040 1.44345 1.44639 1.55302 1.12551 1.23239 1.21270 0.99792 0.78440 0.97943 1.22462 0.95807 0.97835 0.97268 0.86025 1.23596 0.97193 0.93435 1.02639 1.22388 0.99323 0.95632 0.77467 1.92848 1.94471 1.96369 1.34173 1.22010 0.87742 0.96688 0.95025 1.45682 1.29782 1.32063 1.27697 1.18033 0.81799 0.80234 0.84301 1.90795 1.72205 1.54513 1.26560 1.21080 0.96970 0.95649 0.93848 1.67505 1.18517 1.28145 1.03167 1.22991 0.89633 0.94739 0.98449 1.21772 0.98697 0.96618 0.97361 1.25132 0.97020 0.94261 1.01366 1.86511 1.48281 1.29655 1.71369 0.93795 0.86783 0.74043 0.78049 1.21751 0.95623 0.98579 0.91902 1.22288 0.94125 0.95925 1.01084 1.23756 0.96957 0.92645 1.04690 0.91860 0.89454 0.91899 0.91158 0.88323 0.91111 0.91917 0.89445 0.91907 0.74488 0.91747 0.91422 0.89500 0.84689 0.90570 0.87707 0.74484 0.79751 0.86191 0.75242 1.20602 1.22224 0.82039 0.83088 0.85567 0.90284 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.64 8.37 71.98 0.60 -0.03 16 2 C 0.13 0.40 1.13 -10.79 -0.01 0.39 16 3 C -0.14 0.29 8.85 71.98 0.64 0.93 16 4 C -0.18 -0.67 8.37 71.98 0.60 -0.06 16 5 O -0.37 -2.06 9.94 -55.50 -0.55 -2.61 16 6 C 0.64 4.58 8.06 129.79 1.05 5.63 16 7 O -0.60 -7.84 11.88 19.82 0.24 -7.60 16 8 N -0.70 -0.06 5.56 -590.84 -3.29 -3.35 16 9 C 0.15 -0.15 5.28 86.38 0.46 0.31 16 10 C -0.12 0.90 3.94 -10.27 -0.04 0.86 16 11 H 0.12 -1.42 8.14 -2.38 -0.02 -1.44 16 12 C -0.13 1.03 7.13 31.12 0.22 1.25 16 13 C 0.07 -0.28 1.66 -10.27 -0.02 -0.30 16 14 F -0.20 -0.50 15.01 44.97 0.68 0.18 16 15 C 0.11 -0.21 5.36 86.38 0.46 0.26 16 16 N -0.70 -1.28 5.46 -465.65 -2.54 -3.82 16 17 C 0.57 3.68 7.81 86.88 0.68 4.35 16 18 O -0.56 -6.70 16.32 -3.77 -0.06 -6.76 16 19 C 0.06 0.27 6.75 41.91 0.28 0.55 16 20 N -0.46 -1.05 9.54 -184.91 -1.76 -2.81 16 21 C 0.10 -0.21 9.84 84.81 0.83 0.63 16 22 C -0.14 0.41 5.37 -19.69 -0.11 0.30 16 23 C -0.07 0.31 2.82 71.24 0.20 0.51 16 24 O -0.55 1.96 12.84 -148.98 -1.91 0.05 16 25 Si 0.77 -4.21 29.83 68.60 2.05 -2.16 16 26 C -0.05 0.08 9.83 22.45 0.22 0.30 16 27 C -0.11 -0.23 9.63 22.61 0.22 -0.02 16 28 C -0.14 1.07 7.07 31.12 0.22 1.29 16 29 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 30 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 31 H 0.06 0.57 5.88 -2.39 -0.01 0.56 16 32 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 33 H 0.10 -0.53 8.14 -2.39 -0.02 -0.55 16 34 H 0.07 -0.18 8.14 -2.39 -0.02 -0.19 16 35 H 0.06 0.59 5.88 -2.39 -0.01 0.57 16 36 H 0.09 0.01 8.14 -2.38 -0.02 -0.01 16 37 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 38 H 0.42 -2.17 8.58 -92.71 -0.80 -2.97 16 39 H 0.06 0.23 6.31 -2.39 -0.02 0.21 16 40 H 0.07 0.07 8.14 -2.39 -0.02 0.05 16 41 H 0.09 -0.54 8.10 -2.39 -0.02 -0.56 16 42 H 0.13 -1.65 8.10 -2.39 -0.02 -1.67 16 43 H 0.08 0.00 8.14 -2.38 -0.02 -0.02 16 44 H 0.10 -0.45 7.94 -2.38 -0.02 -0.47 16 45 H 0.42 0.37 7.51 -92.70 -0.70 -0.33 16 46 H 0.19 -1.37 4.92 -2.91 -0.01 -1.38 16 47 H 0.12 -0.53 7.96 -2.39 -0.02 -0.55 16 48 H 0.40 -4.45 8.70 -74.06 -0.64 -5.09 16 49 H -0.28 0.23 7.11 99.48 0.71 0.94 16 50 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 51 H 0.16 -0.76 8.06 -2.91 -0.02 -0.78 16 52 H 0.15 0.27 7.64 -2.91 -0.02 0.25 16 53 H 0.13 -1.38 7.96 -2.39 -0.02 -1.40 16 54 H 0.08 -0.41 8.10 -2.39 -0.02 -0.42 16 Total: 0.00 -25.10 440.95 -1.78 -26.89 By element: Atomic # 1 Polarization: -14.01 SS G_CDS: -1.14 Total: -15.15 kcal Atomic # 6 Polarization: 10.64 SS G_CDS: 6.51 Total: 17.15 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -7.59 Total: -9.98 kcal Atomic # 8 Polarization: -14.63 SS G_CDS: -2.29 Total: -16.92 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.68 Total: 0.18 kcal Atomic # 14 Polarization: -4.21 SS G_CDS: 2.05 Total: -2.16 kcal Total: -25.10 -1.78 -26.89 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16498492_13287726.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.872 kcal (2) G-P(sol) polarization free energy of solvation -25.101 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.972 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.785 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.98 seconds