Wall clock time and date at job start Thu Mar 4 2021 15:23:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53005 * 109.46663 * 2 1 4 4 C 1.53004 * 109.47086 * 240.00623 * 2 1 3 5 5 O 1.45195 * 109.47562 * 120.00162 * 2 1 3 6 6 C 1.34635 * 116.99764 * 60.00103 * 5 2 1 7 7 O 1.21513 * 120.00121 * 0.02562 * 6 5 2 8 8 N 1.34786 * 119.99951 * 180.02562 * 6 5 2 9 9 C 1.46491 * 119.99973 * 180.02562 * 8 6 5 10 10 C 1.52999 * 109.47279 * 180.02562 * 9 8 6 11 11 H 1.09008 * 112.84456 * 316.19470 * 10 9 8 12 12 C 1.53777 * 113.61774 * 87.50098 * 10 9 8 13 13 C 1.53781 * 87.08249 * 139.98418 * 12 10 9 14 14 F 1.39897 * 113.68816 * 220.00857 * 13 12 10 15 15 C 1.52998 * 113.61341 * 89.11964 * 13 12 10 16 16 N 1.46491 * 109.47335 * 87.50320 * 15 13 12 17 17 C 1.34777 * 120.00255 * 179.97438 * 16 15 13 18 18 O 1.21547 * 119.99973 * 0.02562 * 17 16 15 19 19 C 1.47839 * 120.00178 * 179.97438 * 17 16 15 20 20 C 1.39516 * 120.55946 * 359.97438 * 19 17 16 21 21 N 1.31694 * 120.57040 * 179.97438 * 20 19 17 22 22 C 1.31936 * 121.87632 * 359.75240 * 21 20 19 23 23 C 1.38352 * 121.07663 * 0.53981 * 22 21 20 24 24 C 1.50693 * 120.34558 * 179.72665 * 23 22 21 25 25 O 1.42907 * 109.47661 * 119.72474 * 24 23 22 26 26 Si 1.86298 * 109.47618 * 359.72164 * 24 23 22 27 27 C 1.38360 * 119.30460 * 359.44817 * 23 22 21 28 28 C 1.53780 * 113.61889 * 185.00401 * 10 9 8 29 29 H 1.09000 * 109.47071 * 299.99384 * 1 2 3 30 30 H 1.08995 * 109.47516 * 59.99549 * 1 2 3 31 31 H 1.09000 * 109.46747 * 179.97438 * 1 2 3 32 32 H 1.09004 * 109.46695 * 180.02562 * 3 2 1 33 33 H 1.08995 * 109.47522 * 300.00446 * 3 2 1 34 34 H 1.09000 * 109.46874 * 60.00495 * 3 2 1 35 35 H 1.09000 * 109.47020 * 299.99457 * 4 2 1 36 36 H 1.08995 * 109.47084 * 59.99563 * 4 2 1 37 37 H 1.09000 * 109.46946 * 179.97438 * 4 2 1 38 38 H 0.96998 * 119.99725 * 359.97438 * 8 6 5 39 39 H 1.09001 * 109.47160 * 60.00141 * 9 8 6 40 40 H 1.08998 * 109.47608 * 299.99954 * 9 8 6 41 41 H 1.09001 * 113.61122 * 25.43658 * 12 10 9 42 42 H 1.09005 * 113.61606 * 254.53594 * 12 10 9 43 43 H 1.09001 * 109.47274 * 327.50018 * 15 13 12 44 44 H 1.08997 * 109.46906 * 207.50248 * 15 13 12 45 45 H 0.97008 * 120.00350 * 359.97438 * 16 15 13 46 46 H 1.08000 * 119.72188 * 0.02562 * 20 19 17 47 47 H 1.07994 * 119.46087 * 180.26528 * 22 21 20 48 48 H 1.09000 * 109.46936 * 239.72097 * 24 23 22 49 49 H 0.96697 * 114.00527 * 179.97438 * 25 24 23 50 50 H 1.48506 * 109.99834 * 298.68714 * 26 24 23 51 51 H 1.48502 * 110.00011 * 59.99978 * 26 24 23 52 52 H 1.07995 * 120.85604 * 180.30178 * 27 23 22 53 53 H 1.08996 * 113.62208 * 105.46310 * 28 10 9 54 54 H 1.09004 * 113.60963 * 334.56628 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0401 -0.7211 -1.2494 5 8 2.0141 -0.6845 1.1855 6 6 1.6524 -1.9723 1.3382 7 8 0.9518 -2.5097 0.5034 8 7 2.0675 -2.6655 2.4170 9 6 1.6744 -4.0669 2.5829 10 6 2.2734 -4.6146 3.8798 11 1 3.3140 -4.3226 4.0217 12 6 1.3904 -4.3747 5.1157 13 6 1.7807 -5.7905 5.5720 14 9 0.7235 -6.5094 6.1399 15 6 3.0518 -5.8316 6.4226 16 7 2.7039 -5.6263 7.8307 17 6 3.6703 -5.6235 8.7701 18 8 4.8306 -5.7908 8.4490 19 6 3.3193 -5.4158 10.1912 20 6 1.9916 -5.2210 10.5727 21 7 1.6786 -5.0364 11.8385 22 6 2.5936 -5.0324 12.7890 23 6 3.9328 -5.2126 12.4920 24 6 4.9647 -5.1990 13.5900 25 8 5.6464 -6.4547 13.6188 26 14 4.1252 -4.9106 15.2279 27 6 4.3139 -5.4112 11.1768 28 6 2.0213 -6.1171 4.0887 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 3.1300 1.4426 -0.0005 33 1 1.6766 1.9565 -0.8899 34 1 1.6766 1.9563 0.8900 35 1 1.6768 -1.7488 -1.2494 36 1 1.6767 -0.2073 -2.1392 37 1 3.1300 -0.7207 -1.2496 38 1 2.6271 -2.2366 3.0832 39 1 2.0417 -4.6497 1.7381 40 1 0.5876 -4.1367 2.6273 41 1 0.3312 -4.2680 4.8815 42 1 1.7614 -3.5868 5.7713 43 1 3.7320 -5.0442 6.0978 44 1 3.5360 -6.8011 6.3056 45 1 1.7780 -5.4924 8.0871 46 1 1.2135 -5.2224 9.8237 47 1 2.2928 -4.8817 13.8152 48 1 5.6826 -4.4001 13.4040 49 1 6.3270 -6.5172 14.3029 50 1 3.4391 -3.5935 15.2220 51 1 3.1438 -5.9932 15.4932 52 1 5.3517 -5.5593 10.9172 53 1 2.9015 -6.7360 3.9150 54 1 1.1346 -6.4867 3.5735 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16498492_13287814.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:23:37 Heat of formation + Delta-G solvation = -132.530546 kcal Electronic energy + Delta-G solvation = -36606.230386 eV Core-core repulsion = 31460.244201 eV Total energy + Delta-G solvation = -5145.986184 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.194 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -48.76322 -42.04361 -41.83981 -40.64016 -39.96072 -38.30580 -37.87075 -36.19910 -35.57475 -34.75374 -33.98719 -33.41201 -30.12701 -28.39124 -28.32491 -27.81461 -27.34317 -27.04004 -25.39546 -23.86310 -23.63669 -22.74493 -21.72777 -21.21750 -20.31952 -19.30615 -19.03311 -18.61342 -18.27486 -18.20175 -17.76233 -17.38068 -17.24877 -16.96578 -16.71000 -16.43317 -16.27112 -16.14563 -15.80350 -15.60923 -15.45228 -15.42385 -15.10932 -15.02441 -14.77676 -14.47169 -14.43552 -14.30594 -14.26534 -13.99956 -13.82841 -13.42413 -13.38312 -13.21444 -13.15326 -12.93278 -12.88951 -12.67053 -12.56108 -12.42350 -12.24172 -12.18672 -12.08743 -11.74558 -11.50958 -11.41691 -11.32583 -11.21914 -11.14289 -10.87321 -10.67878 -10.36891 -10.24260 -10.19366 -4.97862 -0.76446 -0.16462 1.14360 1.21870 1.48803 1.63379 1.73200 1.73410 1.91809 2.45160 2.88517 2.98886 3.08641 3.14571 3.19010 3.21400 3.37770 3.41164 3.53020 3.55288 3.63038 3.69273 3.72165 3.77307 3.92235 3.98408 4.03152 4.12653 4.23227 4.33232 4.43521 4.48601 4.53345 4.55388 4.58941 4.65673 4.66930 4.68783 4.73336 4.74245 4.76724 4.77557 4.82647 4.85459 4.89976 4.94936 5.03970 5.10521 5.16309 5.20686 5.24697 5.29782 5.35936 5.57150 6.14609 6.36300 6.44686 6.84534 6.84850 7.31407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.698 5.698 9 C 0.151 3.849 10 C -0.109 4.109 11 H 0.126 0.874 12 C -0.145 4.145 13 C 0.078 3.922 14 F -0.208 7.208 15 C 0.118 3.882 16 N -0.711 5.711 17 C 0.572 3.428 18 O -0.562 6.562 19 C -0.193 4.193 20 C 0.142 3.858 21 N -0.497 5.497 22 C 0.109 3.891 23 C -0.140 4.140 24 C -0.079 4.079 25 O -0.565 6.565 26 Si 0.779 3.221 27 C 0.005 3.995 28 C -0.135 4.135 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.069 0.931 35 H 0.063 0.937 36 H 0.086 0.914 37 H 0.062 0.938 38 H 0.418 0.582 39 H 0.071 0.929 40 H 0.068 0.932 41 H 0.100 0.900 42 H 0.096 0.904 43 H 0.106 0.894 44 H 0.081 0.919 45 H 0.414 0.586 46 H 0.191 0.809 47 H 0.158 0.842 48 H 0.104 0.896 49 H 0.408 0.592 50 H -0.279 1.279 51 H -0.292 1.292 52 H 0.151 0.849 53 H 0.101 0.899 54 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.233 3.757 2.795 5.690 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.029 3.971 10 C -0.128 4.128 11 H 0.143 0.857 12 C -0.183 4.183 13 C 0.059 3.941 14 F -0.188 7.188 15 C -0.005 4.005 16 N -0.363 5.363 17 C 0.358 3.642 18 O -0.442 6.442 19 C -0.198 4.198 20 C -0.017 4.017 21 N -0.205 5.205 22 C -0.047 4.047 23 C -0.142 4.142 24 C -0.189 4.189 25 O -0.375 6.375 26 Si 0.683 3.317 27 C -0.021 4.021 28 C -0.173 4.173 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.116 0.884 34 H 0.088 0.912 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.254 0.746 39 H 0.089 0.911 40 H 0.086 0.914 41 H 0.118 0.882 42 H 0.114 0.886 43 H 0.124 0.876 44 H 0.099 0.901 45 H 0.252 0.748 46 H 0.208 0.792 47 H 0.174 0.826 48 H 0.122 0.878 49 H 0.260 0.740 50 H -0.205 1.205 51 H -0.219 1.219 52 H 0.169 0.831 53 H 0.119 0.881 54 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 1.642 3.564 2.242 4.520 hybrid contribution 0.292 -0.198 -0.450 0.572 sum 1.934 3.366 1.792 4.276 Atomic orbital electron populations 1.22473 0.94070 1.03676 1.03502 1.22342 0.94429 0.92575 0.81543 1.21893 1.02468 0.90908 1.04230 1.22475 1.01654 1.02249 0.97357 1.86307 1.71538 1.23357 1.47230 1.18385 0.78810 0.80798 0.82571 1.90915 1.42334 1.71027 1.44399 1.44698 1.55326 1.12808 1.23067 1.21335 0.99816 0.78283 0.97715 1.22619 1.01406 0.95996 0.92774 0.85656 1.23802 1.02039 0.95069 0.97363 1.22646 0.84356 0.93847 0.93253 1.92853 1.58803 1.80139 1.87009 1.21782 0.95363 1.04435 0.78954 1.45629 1.10873 1.72868 1.06943 1.17958 0.84978 0.76198 0.85038 1.90805 1.20237 1.50604 1.82530 1.21043 0.96008 1.08307 0.94417 1.23433 0.94247 0.90663 0.93323 1.67729 1.37459 1.13675 1.01592 1.22898 0.88940 0.93824 0.99003 1.20724 0.95306 1.02572 0.95630 1.24814 0.98215 0.90432 1.05407 1.86436 1.56456 1.32940 1.61702 0.93898 0.81751 0.76642 0.79392 1.21709 1.00806 0.88767 0.90833 1.23596 1.05203 0.96531 0.91985 0.91934 0.89524 0.91790 0.91166 0.88368 0.91182 0.91773 0.89525 0.91910 0.74550 0.91055 0.91388 0.88164 0.88583 0.87631 0.90096 0.74825 0.79229 0.82551 0.87843 0.74016 1.20549 1.21936 0.83089 0.88055 0.87575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 2 C 0.13 0.32 1.13 -10.79 -0.01 0.31 16 3 C -0.14 0.33 8.85 71.98 0.64 0.97 16 4 C -0.18 -0.52 8.37 71.98 0.60 0.08 16 5 O -0.37 -1.73 9.94 -55.44 -0.55 -2.28 16 6 C 0.64 3.52 8.06 129.79 1.05 4.56 16 7 O -0.60 -6.67 11.88 19.80 0.24 -6.44 16 8 N -0.70 1.39 5.56 -590.86 -3.29 -1.90 16 9 C 0.15 -0.67 5.51 86.38 0.48 -0.19 16 10 C -0.11 1.03 3.40 -10.27 -0.03 0.99 16 11 H 0.13 -1.52 7.72 -2.38 -0.02 -1.54 16 12 C -0.15 1.23 7.06 31.12 0.22 1.45 16 13 C 0.08 -0.47 1.91 -10.27 -0.02 -0.48 16 14 F -0.21 0.12 16.61 44.97 0.75 0.87 16 15 C 0.12 -0.50 5.26 86.38 0.45 -0.05 16 16 N -0.71 1.46 5.40 -466.01 -2.52 -1.05 16 17 C 0.57 2.40 7.78 86.78 0.68 3.08 16 18 O -0.56 -6.23 16.42 -3.86 -0.06 -6.30 16 19 C -0.19 -0.73 5.89 -19.99 -0.12 -0.85 16 20 C 0.14 0.27 10.71 85.02 0.91 1.18 16 21 N -0.50 -3.05 10.35 -194.76 -2.02 -5.07 16 22 C 0.11 0.58 9.84 84.70 0.83 1.41 16 23 C -0.14 -0.52 5.42 -19.81 -0.11 -0.63 16 24 C -0.08 0.19 2.82 71.23 0.20 0.39 16 25 O -0.56 0.92 12.75 -148.98 -1.90 -0.98 16 26 Si 0.78 -3.50 29.82 68.60 2.05 -1.46 16 27 C 0.01 0.03 9.31 22.73 0.21 0.24 16 28 C -0.13 1.09 7.13 31.12 0.22 1.31 16 29 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 30 H 0.09 -0.04 8.14 -2.39 -0.02 -0.05 16 31 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 32 H 0.07 -0.18 8.14 -2.38 -0.02 -0.20 16 33 H 0.10 -0.54 8.14 -2.39 -0.02 -0.56 16 34 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 35 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 36 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 38 H 0.42 -2.78 8.58 -92.71 -0.80 -3.57 16 39 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.07 -0.16 7.84 -2.39 -0.02 -0.18 16 41 H 0.10 -0.72 7.89 -2.39 -0.02 -0.73 16 42 H 0.10 -0.96 8.10 -2.38 -0.02 -0.98 16 43 H 0.11 -0.66 7.39 -2.39 -0.02 -0.67 16 44 H 0.08 -0.19 8.14 -2.39 -0.02 -0.20 16 45 H 0.41 -2.34 6.10 -92.70 -0.57 -2.90 16 46 H 0.19 -1.00 6.42 -2.91 -0.02 -1.02 16 47 H 0.16 0.53 4.88 -2.91 -0.01 0.52 16 48 H 0.10 -0.71 7.96 -2.39 -0.02 -0.73 16 49 H 0.41 -5.03 8.74 -74.06 -0.65 -5.68 16 50 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 51 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 52 H 0.15 0.80 7.74 -2.91 -0.02 0.77 16 53 H 0.10 -0.97 8.10 -2.39 -0.02 -0.99 16 54 H 0.11 -0.78 8.10 -2.38 -0.02 -0.80 16 Total: 0.00 -27.51 440.39 -1.51 -29.02 By element: Atomic # 1 Polarization: -17.26 SS G_CDS: -1.00 Total: -18.27 kcal Atomic # 6 Polarization: 7.06 SS G_CDS: 6.80 Total: 13.86 kcal Atomic # 7 Polarization: -0.20 SS G_CDS: -7.82 Total: -8.02 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: -2.28 Total: -16.00 kcal Atomic # 9 Polarization: 0.12 SS G_CDS: 0.75 Total: 0.87 kcal Atomic # 14 Polarization: -3.50 SS G_CDS: 2.05 Total: -1.46 kcal Total: -27.51 -1.51 -29.02 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16498492_13287814.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.515 kcal (2) G-P(sol) polarization free energy of solvation -27.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.507 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.531 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds