Wall clock time and date at job start Thu Mar 4 2021 15:27:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47103 * 2 1 4 4 C 1.53002 * 109.47497 * 240.00350 * 2 1 3 5 5 O 1.45195 * 109.47224 * 120.00099 * 2 1 3 6 6 C 1.34638 * 117.00135 * 60.00489 * 5 2 1 7 7 O 1.21513 * 119.99867 * 359.97438 * 6 5 2 8 8 N 1.34777 * 120.00235 * 180.02562 * 6 5 2 9 9 C 1.46498 * 119.99828 * 180.27525 * 8 6 5 10 10 C 1.52996 * 109.47059 * 179.72339 * 9 8 6 11 11 H 1.08997 * 112.85267 * 45.32803 * 10 9 8 12 12 C 1.53781 * 113.61494 * 176.52844 * 10 9 8 13 13 C 1.53781 * 87.08219 * 139.98040 * 12 10 9 14 14 F 1.39900 * 113.61694 * 219.93506 * 13 12 10 15 15 C 1.52998 * 113.61775 * 89.11283 * 13 12 10 16 16 N 1.46495 * 109.47410 * 179.97438 * 15 13 12 17 17 C 1.34776 * 120.00289 * 180.02562 * 16 15 13 18 18 O 1.21641 * 119.99772 * 0.02562 * 17 16 15 19 19 C 1.47187 * 120.00112 * 180.02562 * 17 16 15 20 20 C 1.36004 * 123.46425 * 0.02562 * 19 17 16 21 21 S 1.70445 * 110.82044 * 179.97438 * 20 19 17 22 22 C 1.75507 * 92.44420 * 359.97438 * 21 20 19 23 23 C 1.50704 * 124.71021 * 180.02562 * 22 21 20 24 24 O 1.42892 * 109.47090 * 244.97603 * 23 22 21 25 25 Si 1.86301 * 109.47238 * 4.98106 * 23 22 21 26 26 C 1.32770 * 110.57301 * 359.73889 * 22 21 20 27 27 C 1.53784 * 113.61355 * 274.13660 * 10 9 8 28 28 H 1.08996 * 109.47509 * 299.99293 * 1 2 3 29 29 H 1.09006 * 109.47298 * 59.99979 * 1 2 3 30 30 H 1.09003 * 109.46856 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47042 * 179.97438 * 3 2 1 32 32 H 1.08992 * 109.47205 * 300.00164 * 3 2 1 33 33 H 1.09001 * 109.46587 * 60.00389 * 3 2 1 34 34 H 1.09003 * 109.46840 * 300.00288 * 4 2 1 35 35 H 1.09006 * 109.47115 * 59.99560 * 4 2 1 36 36 H 1.08995 * 109.47291 * 179.97438 * 4 2 1 37 37 H 0.97001 * 119.99727 * 359.97438 * 8 6 5 38 38 H 1.09004 * 109.46963 * 299.72135 * 9 8 6 39 39 H 1.08994 * 109.47567 * 59.72287 * 9 8 6 40 40 H 1.09001 * 113.60987 * 254.52402 * 12 10 9 41 41 H 1.08999 * 113.61627 * 25.42900 * 12 10 9 42 42 H 1.09003 * 109.47541 * 300.00386 * 15 13 12 43 43 H 1.08998 * 109.47004 * 60.00226 * 15 13 12 44 44 H 0.97004 * 120.00593 * 0.02562 * 16 15 13 45 45 H 1.08005 * 124.58990 * 359.97438 * 20 19 17 46 46 H 1.09002 * 109.46545 * 124.97659 * 23 22 21 47 47 H 0.96701 * 113.99967 * 60.00415 * 24 23 22 48 48 H 1.48495 * 110.00187 * 58.67603 * 25 23 22 49 49 H 1.48499 * 110.00015 * 179.97438 * 25 23 22 50 50 H 1.08005 * 123.45748 * 180.22626 * 26 22 21 51 51 H 1.09004 * 113.61160 * 334.56145 * 27 10 9 52 52 H 1.08999 * 113.62074 * 105.47017 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0401 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6523 -1.9723 1.3382 7 8 0.9510 -2.5095 0.5039 8 7 2.0673 -2.6655 2.4170 9 6 1.6788 -4.0686 2.5801 10 6 2.2829 -4.6180 3.8739 11 1 2.1640 -3.9391 4.7183 12 6 1.8645 -6.0651 4.1832 13 6 3.3124 -6.3022 4.6437 14 9 3.8261 -7.5456 4.2600 15 6 3.5425 -5.9959 6.1250 16 7 4.9443 -6.2520 6.4646 17 6 5.3803 -6.0503 7.7239 18 8 4.6097 -5.6560 8.5785 19 6 6.7889 -6.3071 8.0650 20 6 7.7098 -6.7477 7.1664 21 16 9.2348 -6.9353 7.9043 22 6 8.6282 -6.4083 9.4646 23 6 9.4595 -6.3025 10.7172 24 8 8.9870 -7.2434 11.6833 25 14 11.2409 -6.6686 10.3132 26 6 7.3368 -6.1100 9.3867 27 6 3.7166 -5.1487 3.7075 28 1 -0.3634 0.5137 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9564 -0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6767 -1.7488 -1.2493 35 1 1.6767 -0.2073 -2.1393 36 1 3.1300 -0.7207 -1.2495 37 1 2.6269 -2.2366 3.0832 38 1 0.5922 -4.1415 2.6268 39 1 2.0457 -4.6481 1.7330 40 1 1.1322 -6.1455 4.9866 41 1 1.5883 -6.6384 3.2983 42 1 3.3060 -4.9500 6.3208 43 1 2.8997 -6.6334 6.7319 44 1 5.5589 -6.5667 5.7833 45 1 7.5029 -6.9513 6.1261 46 1 9.3787 -5.2939 11.1226 47 1 9.0296 -8.1637 11.3896 48 1 11.7347 -5.7168 9.2859 49 1 12.0712 -6.5669 11.5402 50 1 6.7548 -5.7599 10.2264 51 1 3.9477 -5.4711 2.6922 52 1 4.4774 -4.4906 4.1272 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16498492_6894386.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:27:02 Heat of formation + Delta-G solvation = -142.177814 kcal Electronic energy + Delta-G solvation = -34875.336295 eV Core-core repulsion = 29883.509931 eV Total energy + Delta-G solvation = -4991.826364 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.155 amu Computer time = 1.52 seconds Orbital eigenvalues (eV) -48.73429 -41.84228 -41.13556 -40.11530 -38.82106 -38.29240 -37.13183 -36.11608 -35.48983 -34.72051 -32.02458 -30.00601 -28.38712 -28.32277 -27.73518 -27.03628 -26.95282 -25.16331 -23.65612 -22.73584 -22.07881 -21.25129 -20.73851 -20.06826 -19.24549 -18.94180 -18.17163 -17.97781 -17.69348 -17.37446 -17.26829 -16.91618 -16.64053 -16.38912 -16.22311 -16.16400 -15.90873 -15.61310 -15.49485 -15.38063 -15.11839 -14.88721 -14.46883 -14.46450 -14.35325 -14.12243 -14.00009 -13.70567 -13.58316 -13.40678 -13.34784 -13.19599 -13.14821 -12.92880 -12.88629 -12.65921 -12.55602 -12.41860 -12.31013 -12.23624 -12.08343 -11.95680 -11.60613 -11.41349 -11.35151 -11.14485 -11.10153 -10.58988 -10.37106 -10.24088 -10.01825 -9.45704 -5.13873 -0.36248 0.37821 0.68675 0.79798 1.14538 1.22018 1.60205 1.73529 1.89223 1.93816 2.21069 2.99427 3.10268 3.19981 3.22448 3.38824 3.42108 3.58255 3.65455 3.72453 3.77632 3.87458 3.92540 3.95410 4.03111 4.22760 4.25961 4.33848 4.40462 4.50278 4.54891 4.57145 4.59271 4.66086 4.67622 4.69209 4.74559 4.74948 4.77427 4.83049 4.85677 4.91036 4.96322 4.98716 5.06523 5.14004 5.18796 5.22696 5.25062 5.30262 5.36079 5.57249 6.31785 6.36327 6.68410 7.03197 7.31519 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.699 5.699 9 C 0.151 3.849 10 C -0.110 4.110 11 H 0.122 0.878 12 C -0.135 4.135 13 C 0.080 3.920 14 F -0.207 7.207 15 C 0.119 3.881 16 N -0.712 5.712 17 C 0.579 3.421 18 O -0.579 6.579 19 C -0.184 4.184 20 C -0.191 4.191 21 S 0.254 5.746 22 C -0.249 4.249 23 C -0.037 4.037 24 O -0.552 6.552 25 Si 0.740 3.260 26 C -0.075 4.075 27 C -0.143 4.143 28 H 0.061 0.939 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.417 0.583 38 H 0.071 0.929 39 H 0.069 0.931 40 H 0.099 0.901 41 H 0.108 0.892 42 H 0.100 0.900 43 H 0.075 0.925 44 H 0.414 0.586 45 H 0.201 0.799 46 H 0.115 0.885 47 H 0.397 0.603 48 H -0.256 1.256 49 H -0.273 1.273 50 H 0.133 0.867 51 H 0.102 0.898 52 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.553 -0.946 -3.850 6.037 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.359 5.359 9 C 0.029 3.971 10 C -0.129 4.129 11 H 0.140 0.860 12 C -0.173 4.173 13 C 0.061 3.939 14 F -0.187 7.187 15 C -0.005 4.005 16 N -0.364 5.364 17 C 0.366 3.634 18 O -0.460 6.460 19 C -0.202 4.202 20 C -0.329 4.329 21 S 0.521 5.479 22 C -0.366 4.366 23 C -0.149 4.149 24 O -0.361 6.361 25 Si 0.642 3.358 26 C -0.104 4.104 27 C -0.181 4.181 28 H 0.080 0.920 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.254 0.746 38 H 0.089 0.911 39 H 0.088 0.912 40 H 0.117 0.883 41 H 0.126 0.874 42 H 0.118 0.882 43 H 0.093 0.907 44 H 0.251 0.749 45 H 0.218 0.782 46 H 0.132 0.868 47 H 0.247 0.753 48 H -0.181 1.181 49 H -0.199 1.199 50 H 0.151 0.849 51 H 0.120 0.880 52 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 5.797 -0.534 -3.922 7.019 hybrid contribution -1.779 0.736 0.620 2.022 sum 4.018 0.201 -3.303 5.205 Atomic orbital electron populations 1.22476 0.94081 1.03696 1.03493 1.22343 0.94431 0.92571 0.81556 1.21892 1.02462 0.90930 1.04218 1.22471 1.01649 1.02245 0.97322 1.86308 1.71541 1.23367 1.47244 1.18375 0.78813 0.80789 0.82559 1.90914 1.42265 1.71042 1.44417 1.44698 1.55399 1.12695 1.23125 1.21330 1.00177 0.78193 0.97390 1.22608 0.95699 0.96757 0.97830 0.86003 1.23582 0.94590 0.95458 1.03702 1.22633 0.97318 0.80292 0.93645 1.92854 1.88546 1.45224 1.92100 1.21684 0.82631 1.03552 0.92614 1.45548 1.11845 1.68346 1.10685 1.17836 0.87055 0.76498 0.82008 1.90805 1.57792 1.48109 1.49301 1.20066 0.94001 1.11465 0.94676 1.26168 0.98702 1.02649 1.05412 1.82882 1.07006 1.60354 0.97662 1.24913 0.98744 1.11639 1.01322 1.24689 1.07586 0.96254 0.86370 1.86505 1.87972 1.20689 1.40896 0.94192 0.72108 0.88600 0.80930 1.20979 0.94153 0.99141 0.96117 1.23807 0.97873 0.95816 1.00590 0.91972 0.89510 0.91760 0.91159 0.88351 0.91235 0.91758 0.89524 0.91892 0.74600 0.91100 0.91231 0.88251 0.87403 0.88240 0.90696 0.74905 0.78249 0.86789 0.75299 1.18131 1.19857 0.84888 0.87962 0.88681 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.53 8.37 71.98 0.60 0.08 16 2 C 0.13 0.31 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.33 8.85 71.98 0.64 0.97 16 4 C -0.18 -0.48 8.37 71.98 0.60 0.13 16 5 O -0.37 -1.73 9.94 -55.48 -0.55 -2.28 16 6 C 0.64 3.50 8.06 129.79 1.05 4.54 16 7 O -0.60 -6.59 11.88 19.80 0.24 -6.35 16 8 N -0.70 1.32 5.56 -590.86 -3.29 -1.97 16 9 C 0.15 -0.66 5.50 86.38 0.47 -0.18 16 10 C -0.11 0.99 3.40 -10.27 -0.03 0.96 16 11 H 0.12 -1.35 7.66 -2.39 -0.02 -1.37 16 12 C -0.13 1.05 7.13 31.12 0.22 1.27 16 13 C 0.08 -0.46 1.84 -10.21 -0.02 -0.48 16 14 F -0.21 0.17 16.82 44.97 0.76 0.93 16 15 C 0.12 -0.36 5.24 86.38 0.45 0.09 16 16 N -0.71 1.12 5.44 -466.60 -2.54 -1.41 16 17 C 0.58 3.13 7.79 86.59 0.67 3.80 16 18 O -0.58 -8.17 16.80 -4.16 -0.07 -8.24 16 19 C -0.18 -0.41 5.98 -19.87 -0.12 -0.53 16 20 C -0.19 0.90 10.38 67.30 0.70 1.59 16 21 S 0.25 -1.47 20.20 -56.49 -1.14 -2.62 16 22 C -0.25 0.12 5.65 24.51 0.14 0.26 16 23 C -0.04 0.04 2.94 71.24 0.21 0.25 16 24 O -0.55 -0.31 12.88 -148.98 -1.92 -2.23 16 25 Si 0.74 -2.93 30.92 68.60 2.12 -0.81 16 26 C -0.07 -0.32 9.95 22.67 0.23 -0.09 16 27 C -0.14 1.23 7.10 31.18 0.22 1.45 16 28 H 0.06 0.14 8.14 -2.39 -0.02 0.12 16 29 H 0.09 -0.04 8.14 -2.38 -0.02 -0.06 16 30 H 0.06 0.52 5.88 -2.39 -0.01 0.51 16 31 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 33 H 0.07 -0.17 8.14 -2.39 -0.02 -0.19 16 34 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 35 H 0.09 -0.06 8.14 -2.38 -0.02 -0.08 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.42 -2.65 8.58 -92.71 -0.80 -3.44 16 38 H 0.07 -0.17 8.14 -2.38 -0.02 -0.19 16 39 H 0.07 -0.18 7.87 -2.39 -0.02 -0.20 16 40 H 0.10 -0.88 8.10 -2.39 -0.02 -0.90 16 41 H 0.11 -0.80 8.10 -2.39 -0.02 -0.82 16 42 H 0.10 -0.42 7.34 -2.39 -0.02 -0.44 16 43 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 44 H 0.41 -2.60 6.68 -92.71 -0.62 -3.22 16 45 H 0.20 -2.25 7.01 -2.91 -0.02 -2.27 16 46 H 0.11 0.04 7.96 -2.39 -0.02 0.02 16 47 H 0.40 -3.12 8.70 -74.06 -0.64 -3.76 16 48 H -0.26 0.21 7.11 99.48 0.71 0.92 16 49 H -0.27 -0.77 7.11 99.48 0.71 -0.06 16 50 H 0.13 1.07 8.06 -2.91 -0.02 1.05 16 51 H 0.10 -0.79 7.92 -2.38 -0.02 -0.81 16 52 H 0.09 -0.94 8.10 -2.39 -0.02 -0.96 16 Total: 0.00 -25.54 439.46 -1.41 -26.95 By element: Atomic # 1 Polarization: -15.35 SS G_CDS: -1.04 Total: -16.39 kcal Atomic # 6 Polarization: 8.39 SS G_CDS: 6.02 Total: 14.41 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -5.82 Total: -3.38 kcal Atomic # 8 Polarization: -16.79 SS G_CDS: -2.30 Total: -19.10 kcal Atomic # 9 Polarization: 0.17 SS G_CDS: 0.76 Total: 0.93 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.12 Total: -0.81 kcal Atomic # 16 Polarization: -1.47 SS G_CDS: -1.14 Total: -2.62 kcal Total: -25.54 -1.41 -26.95 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16498492_6894386.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.223 kcal (2) G-P(sol) polarization free energy of solvation -25.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.954 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds