Wall clock time and date at job start Thu Mar 4 2021 15:31:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52999 * 109.47209 * 2 1 4 4 C 1.52998 * 109.47250 * 239.99688 * 2 1 3 5 5 O 1.45206 * 109.46730 * 119.99661 * 2 1 3 6 6 C 1.34642 * 116.99881 * 60.00129 * 5 2 1 7 7 O 1.21508 * 120.00065 * 359.97438 * 6 5 2 8 8 N 1.34774 * 120.00108 * 180.02562 * 6 5 2 9 9 C 1.46499 * 120.00234 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.47084 * 179.97438 * 9 8 6 11 11 H 1.09000 * 112.90903 * 43.74420 * 10 9 8 12 12 C 1.53784 * 113.61330 * 174.99792 * 10 9 8 13 13 C 1.53787 * 87.07923 * 139.97966 * 12 10 9 14 14 F 1.39901 * 113.61318 * 89.20282 * 13 12 10 15 15 C 1.53003 * 113.61385 * 220.01697 * 13 12 10 16 16 N 1.46498 * 109.47015 * 185.00396 * 15 13 12 17 17 C 1.34775 * 120.00104 * 180.02562 * 16 15 13 18 18 O 1.21616 * 119.99479 * 359.97438 * 17 16 15 19 19 C 1.47373 * 120.00221 * 180.02562 * 17 16 15 20 20 C 1.36410 * 127.19418 * 0.02562 * 19 17 16 21 21 O 1.33654 * 108.40294 * 179.97438 * 20 19 17 22 22 C 1.34216 * 110.90476 * 0.02562 * 21 20 19 23 23 C 1.50698 * 125.43873 * 179.97438 * 22 21 20 24 24 O 1.42899 * 109.47229 * 244.97274 * 23 22 21 25 25 Si 1.86298 * 109.47057 * 4.97313 * 23 22 21 26 26 C 1.34178 * 109.12384 * 359.74367 * 22 21 20 27 27 C 1.53778 * 87.08035 * 334.56830 * 13 12 10 28 28 H 1.09001 * 109.47464 * 300.00707 * 1 2 3 29 29 H 1.09001 * 109.46235 * 60.00413 * 1 2 3 30 30 H 1.08997 * 109.47074 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.46942 * 179.97438 * 3 2 1 32 32 H 1.08996 * 109.47389 * 299.99420 * 3 2 1 33 33 H 1.08997 * 109.47080 * 59.99941 * 3 2 1 34 34 H 1.09005 * 109.47002 * 300.00110 * 4 2 1 35 35 H 1.08990 * 109.47343 * 60.00284 * 4 2 1 36 36 H 1.09003 * 109.46734 * 180.02562 * 4 2 1 37 37 H 0.97005 * 119.99833 * 359.97438 * 8 6 5 38 38 H 1.09004 * 109.47092 * 59.99495 * 9 8 6 39 39 H 1.08995 * 109.46661 * 299.99459 * 9 8 6 40 40 H 1.09004 * 113.61451 * 25.43452 * 12 10 9 41 41 H 1.08994 * 113.61477 * 254.52754 * 12 10 9 42 42 H 1.08996 * 109.47095 * 305.00324 * 15 13 12 43 43 H 1.09005 * 109.46621 * 65.00138 * 15 13 12 44 44 H 0.97004 * 120.00129 * 359.97438 * 16 15 13 45 45 H 1.08004 * 125.80266 * 359.96587 * 20 19 17 46 46 H 1.08999 * 109.47349 * 124.97100 * 23 22 21 47 47 H 0.96708 * 113.99978 * 60.00248 * 24 23 22 48 48 H 1.48498 * 110.00261 * 179.97438 * 25 23 22 49 49 H 1.48504 * 110.00066 * 301.32193 * 25 23 22 50 50 H 1.08003 * 127.02682 * 180.26621 * 26 22 21 51 51 H 1.08999 * 113.61111 * 139.98327 * 27 13 12 52 52 H 1.08999 * 113.61280 * 270.79710 * 27 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0401 -0.7213 -1.2492 5 8 2.0140 -0.6845 1.1857 6 6 1.6521 -1.9723 1.3385 7 8 0.9508 -2.5094 0.5042 8 7 2.0670 -2.6654 2.4173 9 6 1.6738 -4.0668 2.5833 10 6 2.2737 -4.6147 3.8798 11 1 2.1801 -3.9223 4.7164 12 6 1.8207 -6.0464 4.2113 13 6 3.2657 -6.3146 4.6641 14 9 3.4931 -6.0242 6.0137 15 6 3.7898 -7.6930 4.2566 16 7 5.1211 -7.8991 4.8323 17 6 5.7828 -9.0509 4.6048 18 8 5.2745 -9.9194 3.9218 19 6 7.1218 -9.2585 5.1845 20 6 7.8247 -8.3908 5.9678 21 8 8.9924 -8.9590 6.2841 22 6 9.0945 -10.1802 5.7369 23 6 10.2738 -11.1071 5.8824 24 8 10.8898 -11.2981 4.6072 25 14 11.5075 -10.3617 7.0626 26 6 7.9769 -10.4462 5.0437 27 6 3.6909 -5.1867 3.7092 28 1 -0.3634 0.5139 0.8899 29 1 -0.3632 0.5138 -0.8901 30 1 -0.3633 -1.0276 -0.0005 31 1 3.1301 1.4424 0.0005 32 1 1.6769 1.9563 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6767 -1.7490 -1.2491 35 1 1.6768 -0.2076 -2.1391 36 1 3.1301 -0.7216 -1.2489 37 1 2.6266 -2.2365 3.0836 38 1 2.0410 -4.6497 1.7386 39 1 0.5870 -4.1364 2.6277 40 1 1.5231 -6.6240 3.3361 41 1 1.0928 -6.0976 5.0210 42 1 3.1117 -8.4630 4.6245 43 1 3.8508 -7.7517 3.1698 44 1 5.5266 -7.2062 5.3767 45 1 7.4941 -7.4110 6.2795 46 1 9.9351 -12.0680 6.2698 47 1 11.2159 -10.4828 4.2019 48 1 12.6751 -11.2665 7.2153 49 1 11.9532 -9.0367 6.5617 50 1 7.7519 -11.3478 4.4933 51 1 4.4728 -4.5439 4.1136 52 1 3.9060 -5.5295 2.6971 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16498590_13456056.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:31:27 Heat of formation + Delta-G solvation = -154.575150 kcal Electronic energy + Delta-G solvation = -35090.268357 eV Core-core repulsion = 29973.833726 eV Total energy + Delta-G solvation = -5116.434632 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.183 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -48.84486 -43.73927 -41.82393 -40.66801 -39.81271 -38.24914 -38.16137 -36.13318 -35.52150 -34.72712 -33.98982 -32.02291 -30.19511 -28.38428 -28.31778 -27.78457 -27.00500 -26.56972 -24.69102 -23.40202 -22.36508 -22.29069 -21.39565 -20.98577 -20.46001 -19.49989 -19.13868 -18.02006 -17.74434 -17.58943 -17.48982 -17.35894 -17.28584 -16.90310 -16.60157 -16.36211 -16.25116 -15.99327 -15.77978 -15.69582 -15.47844 -15.44347 -15.01442 -14.65079 -14.46727 -14.24038 -14.17511 -13.99241 -13.93314 -13.67705 -13.59431 -13.35920 -13.32491 -13.13031 -12.95701 -12.93058 -12.87993 -12.54570 -12.37138 -12.18712 -12.14617 -12.06065 -11.57208 -11.40795 -11.35485 -11.22334 -11.10838 -11.00347 -10.77240 -10.31012 -10.22587 -9.82201 -4.91484 0.22831 0.79584 1.15656 1.17556 1.52036 1.74459 1.74789 1.91705 1.96442 2.19791 3.01948 3.11714 3.15259 3.21364 3.26989 3.44340 3.50571 3.53669 3.57155 3.72976 3.78071 3.93038 3.95115 4.05031 4.23646 4.31097 4.35115 4.42552 4.49600 4.49990 4.59266 4.59628 4.61439 4.66989 4.72825 4.74322 4.74946 4.82169 4.86235 4.87108 4.88269 4.91809 4.99225 5.06741 5.10596 5.19114 5.21535 5.25406 5.32775 5.41527 5.58273 5.80859 6.33493 6.35266 6.37700 7.04647 7.32598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.596 6.596 8 N -0.699 5.699 9 C 0.149 3.851 10 C -0.111 4.111 11 H 0.115 0.885 12 C -0.137 4.137 13 C 0.085 3.915 14 F -0.192 7.192 15 C 0.111 3.889 16 N -0.711 5.711 17 C 0.588 3.412 18 O -0.583 6.583 19 C -0.270 4.270 20 C 0.067 3.933 21 O -0.165 6.165 22 C -0.050 4.050 23 C -0.046 4.046 24 O -0.540 6.540 25 Si 0.791 3.209 26 C -0.149 4.149 27 C -0.144 4.144 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.097 0.903 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.417 0.583 38 H 0.072 0.928 39 H 0.069 0.931 40 H 0.118 0.882 41 H 0.093 0.907 42 H 0.073 0.927 43 H 0.093 0.907 44 H 0.415 0.585 45 H 0.260 0.740 46 H 0.149 0.851 47 H 0.391 0.609 48 H -0.287 1.287 49 H -0.286 1.286 50 H 0.146 0.854 51 H 0.096 0.904 52 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.468 6.636 4.969 8.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.284 6.284 6 C 0.394 3.606 7 O -0.487 6.487 8 N -0.359 5.359 9 C 0.027 3.973 10 C -0.129 4.129 11 H 0.133 0.867 12 C -0.175 4.175 13 C 0.066 3.934 14 F -0.172 7.172 15 C -0.013 4.013 16 N -0.363 5.363 17 C 0.378 3.622 18 O -0.464 6.464 19 C -0.275 4.275 20 C -0.004 4.004 21 O -0.060 6.060 22 C -0.099 4.099 23 C -0.154 4.154 24 O -0.348 6.348 25 Si 0.693 3.307 26 C -0.169 4.169 27 C -0.181 4.181 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.089 0.911 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.082 0.918 35 H 0.104 0.896 36 H 0.081 0.919 37 H 0.254 0.746 38 H 0.090 0.910 39 H 0.087 0.913 40 H 0.136 0.864 41 H 0.112 0.888 42 H 0.091 0.909 43 H 0.111 0.889 44 H 0.253 0.747 45 H 0.276 0.724 46 H 0.166 0.834 47 H 0.241 0.759 48 H -0.214 1.214 49 H -0.212 1.212 50 H 0.164 0.836 51 H 0.114 0.886 52 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 1.631 5.632 4.457 7.365 hybrid contribution 0.069 0.343 -0.976 1.037 sum 1.701 5.975 3.480 7.121 Atomic orbital electron populations 1.22477 0.94091 1.03683 1.03506 1.22338 0.94421 0.92581 0.81529 1.21891 1.02471 0.90896 1.04234 1.22473 1.01642 1.02245 0.97370 1.86309 1.71551 1.23363 1.47206 1.18387 0.78810 0.80792 0.82593 1.90915 1.42293 1.71042 1.44446 1.44711 1.55283 1.12827 1.23085 1.21377 1.00094 0.78287 0.97534 1.22708 0.95978 0.96948 0.97301 0.86732 1.23585 0.94511 0.95619 1.03825 1.22037 0.99380 0.94228 0.77737 1.92863 1.95518 1.94427 1.34399 1.21896 0.83471 0.95824 1.00101 1.45523 1.18670 1.18172 1.53939 1.17469 0.84058 0.81587 0.79133 1.90800 1.69718 1.44618 1.41285 1.21455 0.97587 0.98510 1.09931 1.25273 0.82126 0.98882 0.94084 1.83729 1.35858 1.27033 1.59375 1.22710 0.99601 0.86102 1.01439 1.24718 0.95725 1.01985 0.92934 1.86653 1.77483 1.37557 1.33112 0.93434 0.76566 0.75530 0.85151 1.22573 0.92888 0.99262 1.02163 1.23804 0.97874 0.96071 1.00357 0.91903 0.89548 0.91790 0.91146 0.88398 0.91151 0.91790 0.89558 0.91910 0.74581 0.91004 0.91295 0.86416 0.88814 0.90914 0.88912 0.74717 0.72434 0.83389 0.75935 1.21435 1.21176 0.83632 0.88559 0.87241 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.48 8.37 71.98 0.60 0.12 16 2 C 0.13 0.28 1.13 -10.79 -0.01 0.27 16 3 C -0.14 0.38 8.85 71.98 0.64 1.02 16 4 C -0.18 -0.47 8.37 71.98 0.60 0.13 16 5 O -0.37 -1.59 9.94 -55.51 -0.55 -2.14 16 6 C 0.64 3.31 8.06 129.79 1.05 4.35 16 7 O -0.60 -6.50 11.88 19.81 0.24 -6.26 16 8 N -0.70 1.58 5.56 -590.86 -3.29 -1.71 16 9 C 0.15 -0.72 5.51 86.38 0.48 -0.24 16 10 C -0.11 1.03 3.73 -10.27 -0.04 0.99 16 11 H 0.11 -1.15 8.14 -2.39 -0.02 -1.17 16 12 C -0.14 1.19 7.10 31.12 0.22 1.41 16 13 C 0.08 -0.61 1.74 -10.27 -0.02 -0.63 16 14 F -0.19 0.75 16.58 44.97 0.75 1.50 16 15 C 0.11 -0.36 5.42 86.38 0.47 0.11 16 16 N -0.71 1.73 5.44 -466.42 -2.54 -0.80 16 17 C 0.59 3.22 7.81 86.65 0.68 3.89 16 18 O -0.58 -8.83 16.98 -4.08 -0.07 -8.90 16 19 C -0.27 -0.62 6.31 -18.99 -0.12 -0.74 16 20 C 0.07 -0.36 11.61 67.39 0.78 0.42 16 21 O -0.16 0.41 8.90 4.44 0.04 0.45 16 22 C -0.05 -0.02 6.18 24.76 0.15 0.13 16 23 C -0.05 0.08 2.97 71.24 0.21 0.29 16 24 O -0.54 -0.86 12.88 -148.98 -1.92 -2.78 16 25 Si 0.79 -2.80 32.09 68.60 2.20 -0.60 16 26 C -0.15 -0.72 10.90 23.65 0.26 -0.46 16 27 C -0.14 1.40 7.08 31.12 0.22 1.62 16 28 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 29 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 30 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 31 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.10 -0.57 8.14 -2.39 -0.02 -0.59 16 33 H 0.07 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.06 0.51 5.88 -2.38 -0.01 0.49 16 35 H 0.09 -0.05 8.14 -2.39 -0.02 -0.07 16 36 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 37 H 0.42 -2.85 8.58 -92.70 -0.80 -3.65 16 38 H 0.07 -0.25 7.85 -2.38 -0.02 -0.27 16 39 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 40 H 0.12 -1.19 8.06 -2.39 -0.02 -1.21 16 41 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 42 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 43 H 0.09 -0.29 7.84 -2.38 -0.02 -0.31 16 44 H 0.42 -3.55 7.00 -92.71 -0.65 -4.19 16 45 H 0.26 -4.17 7.47 -2.91 -0.02 -4.19 16 46 H 0.15 -0.63 7.96 -2.39 -0.02 -0.64 16 47 H 0.39 -1.65 8.70 -74.05 -0.64 -2.30 16 48 H -0.29 -0.81 7.11 99.48 0.71 -0.11 16 49 H -0.29 -0.39 7.11 99.48 0.71 0.31 16 50 H 0.15 1.07 8.06 -2.91 -0.02 1.05 16 51 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 52 H 0.11 -1.07 7.65 -2.39 -0.02 -1.09 16 Total: 0.00 -28.45 434.26 -0.05 -28.50 By element: Atomic # 1 Polarization: -18.86 SS G_CDS: -1.08 Total: -19.93 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: 6.17 Total: 12.68 kcal Atomic # 7 Polarization: 3.31 SS G_CDS: -5.82 Total: -2.51 kcal Atomic # 8 Polarization: -17.37 SS G_CDS: -2.26 Total: -19.64 kcal Atomic # 9 Polarization: 0.75 SS G_CDS: 0.75 Total: 1.50 kcal Atomic # 14 Polarization: -2.80 SS G_CDS: 2.20 Total: -0.60 kcal Total: -28.45 -0.05 -28.50 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16498590_13456056.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.074 kcal (2) G-P(sol) polarization free energy of solvation -28.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.527 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.048 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds