Wall clock time and date at job start Thu Mar 4 2021 15:34:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52992 * 1 3 3 C 1.53002 * 109.47169 * 2 1 4 4 C 1.52990 * 109.47313 * 239.99435 * 2 1 3 5 5 O 1.45205 * 109.46903 * 119.99251 * 2 1 3 6 6 C 1.34636 * 116.99683 * 60.00523 * 5 2 1 7 7 O 1.21509 * 120.00512 * 359.97438 * 6 5 2 8 8 N 1.34780 * 119.99705 * 180.02562 * 6 5 2 9 9 C 1.46504 * 119.99815 * 179.97438 * 8 6 5 10 10 C 1.53000 * 109.47208 * 179.97438 * 9 8 6 11 11 H 1.08999 * 112.84793 * 43.80334 * 10 9 8 12 12 C 1.53778 * 113.61606 * 174.99728 * 10 9 8 13 13 C 1.53787 * 87.07926 * 140.06686 * 12 10 9 14 14 F 1.39899 * 113.60922 * 89.20126 * 13 12 10 15 15 C 1.52996 * 113.61129 * 220.01768 * 13 12 10 16 16 N 1.46504 * 109.46681 * 185.00006 * 15 13 12 17 17 C 1.34777 * 119.99854 * 179.97438 * 16 15 13 18 18 O 1.21643 * 119.99986 * 0.02562 * 17 16 15 19 19 C 1.47192 * 120.00208 * 180.27760 * 17 16 15 20 20 C 1.36009 * 123.45877 * 359.43186 * 19 17 16 21 21 S 1.70448 * 110.81900 * 179.85719 * 20 19 17 22 22 C 1.75507 * 92.44311 * 0.34763 * 21 20 19 23 23 C 1.50695 * 124.71229 * 179.82344 * 22 21 20 24 24 O 1.42898 * 109.47219 * 119.97777 * 23 22 21 25 25 Si 1.86296 * 109.47249 * 359.97364 * 23 22 21 26 26 C 1.32772 * 110.57647 * 359.80410 * 22 21 20 27 27 C 1.53779 * 113.69223 * 272.53936 * 10 9 8 28 28 H 1.09002 * 109.47407 * 300.00732 * 1 2 3 29 29 H 1.08999 * 109.47080 * 60.00405 * 1 2 3 30 30 H 1.09005 * 109.47377 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.47028 * 180.02562 * 3 2 1 32 32 H 1.09009 * 109.46444 * 299.99328 * 3 2 1 33 33 H 1.08991 * 109.47153 * 59.99633 * 3 2 1 34 34 H 1.09003 * 109.47502 * 299.99875 * 4 2 1 35 35 H 1.09002 * 109.47809 * 60.00151 * 4 2 1 36 36 H 1.09007 * 109.47832 * 180.02562 * 4 2 1 37 37 H 0.96997 * 120.00499 * 359.97438 * 8 6 5 38 38 H 1.08997 * 109.47181 * 59.99620 * 9 8 6 39 39 H 1.08995 * 109.47083 * 299.99615 * 9 8 6 40 40 H 1.08998 * 113.61548 * 25.52278 * 12 10 9 41 41 H 1.08993 * 113.61513 * 254.61436 * 12 10 9 42 42 H 1.08998 * 109.47328 * 65.00338 * 15 13 12 43 43 H 1.08997 * 109.47540 * 305.00085 * 15 13 12 44 44 H 0.97000 * 120.00410 * 0.02562 * 16 15 13 45 45 H 1.08002 * 124.58780 * 359.97438 * 20 19 17 46 46 H 1.09012 * 109.47264 * 239.97484 * 23 22 21 47 47 H 0.96698 * 114.00315 * 179.97438 * 24 23 22 48 48 H 1.48499 * 110.00097 * 298.68419 * 25 23 22 49 49 H 1.48504 * 109.99675 * 60.00277 * 25 23 22 50 50 H 1.08001 * 123.46193 * 180.02562 * 26 22 21 51 51 H 1.08992 * 113.61622 * 105.45985 * 27 10 9 52 52 H 1.08995 * 113.61241 * 334.54975 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0399 -0.7213 -1.2491 5 8 2.0139 -0.6844 1.1857 6 6 1.6521 -1.9722 1.3385 7 8 0.9509 -2.5094 0.5042 8 7 2.0671 -2.6652 2.4175 9 6 1.6730 -4.0663 2.5841 10 6 2.2731 -4.6143 3.8804 11 1 2.1789 -3.9212 4.7164 12 6 1.8193 -6.0455 4.2126 13 6 3.2638 -6.3138 4.6670 14 9 3.4899 -6.0224 6.0165 15 6 3.7878 -7.6927 4.2610 16 7 5.1185 -7.8987 4.8381 17 6 5.7797 -9.0514 4.6129 18 8 5.2717 -9.9205 3.9301 19 6 7.1140 -9.2609 5.1978 20 6 7.7498 -8.3358 5.9659 21 16 9.2704 -8.9133 6.4755 22 6 9.0595 -10.4363 5.6291 23 6 10.0705 -11.5536 5.6083 24 8 9.4882 -12.7333 6.1662 25 14 11.5604 -11.0617 6.6128 26 6 7.8854 -10.4674 5.0100 27 6 3.6903 -5.1868 3.7117 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 3.1299 1.4425 -0.0005 32 1 1.6766 1.9562 -0.8901 33 1 1.6766 1.9563 0.8899 34 1 1.6767 -1.7490 -1.2490 35 1 1.6767 -0.2076 -2.1392 36 1 3.1300 -0.7218 -1.2489 37 1 2.6266 -2.2363 3.0837 38 1 2.0395 -4.6497 1.7394 39 1 0.5862 -4.1352 2.6289 40 1 1.5224 -6.6236 3.3376 41 1 1.0907 -6.0958 5.0216 42 1 3.8499 -7.7523 3.1744 43 1 3.1091 -8.4622 4.6288 44 1 5.5235 -7.2058 5.3830 45 1 7.3450 -7.3673 6.2201 46 1 10.3742 -11.7498 4.5799 47 1 10.0836 -13.4950 6.1846 48 1 12.1938 -9.8544 6.0241 49 1 11.1596 -10.7916 8.0169 50 1 7.5421 -11.3087 4.4263 51 1 4.4720 -4.5439 4.1163 52 1 3.9049 -5.5301 2.6997 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16498590_6894386.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:34:08 Heat of formation + Delta-G solvation = -139.055269 kcal Electronic energy + Delta-G solvation = -34711.422647 eV Core-core repulsion = 29719.731687 eV Total energy + Delta-G solvation = -4991.690960 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.155 amu Computer time = 1.77 seconds Orbital eigenvalues (eV) -48.90340 -41.84059 -41.14467 -39.93803 -38.76230 -38.26106 -37.22176 -36.17796 -35.54841 -34.73215 -32.26181 -30.22593 -28.39343 -28.32793 -27.81011 -27.04398 -27.02912 -25.29776 -23.47480 -22.37077 -22.03940 -21.32120 -20.71609 -20.41462 -19.25770 -18.90615 -18.44938 -18.26737 -17.73942 -17.38421 -17.28758 -16.97180 -16.72939 -16.43846 -16.29894 -16.08314 -15.97747 -15.67554 -15.48198 -15.42320 -15.05196 -14.78772 -14.48436 -14.40379 -14.29346 -14.01378 -13.96005 -13.89854 -13.77770 -13.64752 -13.37073 -13.34355 -13.14250 -12.94085 -12.89216 -12.69943 -12.56081 -12.43158 -12.37926 -12.21057 -12.12236 -12.09225 -11.55901 -11.41939 -11.39161 -11.18337 -11.10647 -10.52823 -10.38315 -10.24596 -10.02447 -9.64091 -5.20546 -0.49137 0.24997 0.59169 0.70792 1.13996 1.18822 1.59006 1.72840 1.86275 1.90759 2.12805 2.98982 3.07522 3.12353 3.22925 3.31591 3.44533 3.53050 3.66521 3.71910 3.77095 3.77959 3.92030 3.92209 4.01359 4.15117 4.20938 4.31202 4.41189 4.48206 4.53134 4.58330 4.58766 4.59277 4.63294 4.69652 4.71581 4.73940 4.80620 4.85041 4.85252 4.86551 4.89236 4.95600 5.03989 5.05245 5.14601 5.19663 5.24511 5.31070 5.38129 5.56599 6.25336 6.35642 6.83571 6.96375 7.30765 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.370 6.370 6 C 0.641 3.359 7 O -0.595 6.595 8 N -0.699 5.699 9 C 0.150 3.850 10 C -0.110 4.110 11 H 0.113 0.887 12 C -0.135 4.135 13 C 0.081 3.919 14 F -0.195 7.195 15 C 0.110 3.890 16 N -0.712 5.712 17 C 0.580 3.420 18 O -0.575 6.575 19 C -0.179 4.179 20 C -0.184 4.184 21 S 0.187 5.813 22 C -0.211 4.211 23 C -0.049 4.049 24 O -0.564 6.564 25 Si 0.758 3.242 26 C -0.069 4.069 27 C -0.144 4.144 28 H 0.062 0.938 29 H 0.086 0.914 30 H 0.063 0.937 31 H 0.069 0.931 32 H 0.098 0.902 33 H 0.069 0.931 34 H 0.063 0.937 35 H 0.086 0.914 36 H 0.062 0.938 37 H 0.417 0.583 38 H 0.073 0.927 39 H 0.070 0.930 40 H 0.120 0.880 41 H 0.093 0.907 42 H 0.097 0.903 43 H 0.074 0.926 44 H 0.413 0.587 45 H 0.203 0.797 46 H 0.103 0.897 47 H 0.406 0.594 48 H -0.260 1.260 49 H -0.274 1.274 50 H 0.144 0.856 51 H 0.093 0.907 52 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.635 3.138 1.704 6.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.285 6.285 6 C 0.395 3.605 7 O -0.486 6.486 8 N -0.360 5.360 9 C 0.028 3.972 10 C -0.129 4.129 11 H 0.131 0.869 12 C -0.173 4.173 13 C 0.063 3.937 14 F -0.175 7.175 15 C -0.013 4.013 16 N -0.364 5.364 17 C 0.366 3.634 18 O -0.456 6.456 19 C -0.197 4.197 20 C -0.322 4.322 21 S 0.452 5.548 22 C -0.327 4.327 23 C -0.161 4.161 24 O -0.375 6.375 25 Si 0.660 3.340 26 C -0.098 4.098 27 C -0.181 4.181 28 H 0.081 0.919 29 H 0.105 0.895 30 H 0.082 0.918 31 H 0.088 0.912 32 H 0.116 0.884 33 H 0.088 0.912 34 H 0.082 0.918 35 H 0.105 0.895 36 H 0.081 0.919 37 H 0.254 0.746 38 H 0.091 0.909 39 H 0.088 0.912 40 H 0.138 0.862 41 H 0.112 0.888 42 H 0.115 0.885 43 H 0.092 0.908 44 H 0.250 0.750 45 H 0.220 0.780 46 H 0.120 0.880 47 H 0.258 0.742 48 H -0.185 1.185 49 H -0.200 1.200 50 H 0.162 0.838 51 H 0.111 0.889 52 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 5.930 3.970 2.233 7.477 hybrid contribution -1.522 -0.190 -0.554 1.631 sum 4.408 3.779 1.678 6.044 Atomic orbital electron populations 1.22476 0.94073 1.03691 1.03514 1.22341 0.94438 0.92584 0.81524 1.21893 1.02464 0.90897 1.04241 1.22473 1.01639 1.02252 0.97361 1.86309 1.71560 1.23352 1.47241 1.18375 0.78802 0.80796 0.82570 1.90914 1.42266 1.71026 1.44414 1.44716 1.55286 1.12856 1.23116 1.21370 1.00115 0.78312 0.97432 1.22697 0.95861 0.96944 0.97390 0.86878 1.23578 0.94279 0.95623 1.03860 1.22097 0.99649 0.94330 0.77646 1.92858 1.95577 1.94426 1.34632 1.21938 0.83292 0.95842 1.00264 1.45580 1.18817 1.18211 1.53768 1.17736 0.84438 0.81721 0.79458 1.90800 1.69506 1.44245 1.41013 1.20179 0.96840 0.96424 1.06239 1.26114 1.00151 1.04741 1.01214 1.83177 1.15145 1.08052 1.48389 1.23822 1.01205 1.01062 1.06581 1.24311 1.00759 0.85713 1.05292 1.86468 1.44852 1.21498 1.84657 0.93624 0.78981 0.84469 0.76937 1.21043 0.92377 0.97119 0.99293 1.23806 0.97893 0.96018 1.00384 0.91939 0.89494 0.91783 0.91162 0.88353 0.91175 0.91780 0.89508 0.91921 0.74640 0.90884 0.91177 0.86168 0.88829 0.88512 0.90812 0.74987 0.78045 0.87981 0.74213 1.18530 1.19962 0.83792 0.88851 0.87028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.55 8.37 71.98 0.60 0.05 16 2 C 0.13 0.34 1.13 -10.80 -0.01 0.33 16 3 C -0.14 0.32 8.85 71.98 0.64 0.96 16 4 C -0.18 -0.54 8.37 71.98 0.60 0.06 16 5 O -0.37 -1.81 9.94 -55.45 -0.55 -2.36 16 6 C 0.64 3.71 8.06 129.79 1.05 4.75 16 7 O -0.60 -6.77 11.88 19.81 0.24 -6.53 16 8 N -0.70 0.98 5.56 -590.85 -3.29 -2.30 16 9 C 0.15 -0.59 5.51 86.38 0.48 -0.12 16 10 C -0.11 0.87 3.73 -10.27 -0.04 0.84 16 11 H 0.11 -0.96 8.14 -2.39 -0.02 -0.98 16 12 C -0.13 0.99 7.10 31.12 0.22 1.22 16 13 C 0.08 -0.41 1.74 -10.27 -0.02 -0.43 16 14 F -0.19 0.21 16.58 44.97 0.75 0.95 16 15 C 0.11 -0.14 5.42 86.38 0.47 0.33 16 16 N -0.71 -0.61 5.42 -466.59 -2.53 -3.13 16 17 C 0.58 4.71 7.79 86.60 0.67 5.39 16 18 O -0.57 -9.30 16.80 -4.17 -0.07 -9.37 16 19 C -0.18 -1.10 5.98 -19.87 -0.12 -1.21 16 20 C -0.18 -0.07 10.38 67.30 0.70 0.63 16 21 S 0.19 0.33 20.18 -56.49 -1.14 -0.81 16 22 C -0.21 -1.00 5.72 24.51 0.14 -0.86 16 23 C -0.05 0.03 2.94 71.23 0.21 0.24 16 24 O -0.56 -0.22 12.82 -148.98 -1.91 -2.13 16 25 Si 0.76 -2.84 30.91 68.60 2.12 -0.72 16 26 C -0.07 -0.56 9.91 22.67 0.22 -0.33 16 27 C -0.14 1.15 7.08 31.12 0.22 1.37 16 28 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 29 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 30 H 0.06 0.53 5.88 -2.38 -0.01 0.52 16 31 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 32 H 0.10 -0.54 8.14 -2.38 -0.02 -0.56 16 33 H 0.07 -0.18 8.14 -2.39 -0.02 -0.20 16 34 H 0.06 0.53 5.88 -2.39 -0.01 0.51 16 35 H 0.09 -0.03 8.14 -2.39 -0.02 -0.05 16 36 H 0.06 0.14 8.14 -2.38 -0.02 0.12 16 37 H 0.42 -2.41 8.58 -92.71 -0.80 -3.21 16 38 H 0.07 -0.21 7.85 -2.39 -0.02 -0.23 16 39 H 0.07 -0.14 8.14 -2.39 -0.02 -0.16 16 40 H 0.12 -1.11 8.06 -2.39 -0.02 -1.13 16 41 H 0.09 -0.65 8.14 -2.39 -0.02 -0.67 16 42 H 0.10 -0.18 7.84 -2.39 -0.02 -0.20 16 43 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 44 H 0.41 -1.56 6.53 -92.71 -0.60 -2.17 16 45 H 0.20 -1.40 7.01 -2.91 -0.02 -1.42 16 46 H 0.10 -0.46 7.96 -2.38 -0.02 -0.48 16 47 H 0.41 -4.32 8.74 -74.06 -0.65 -4.97 16 48 H -0.26 0.02 7.11 99.48 0.71 0.73 16 49 H -0.27 -0.75 7.11 99.48 0.71 -0.05 16 50 H 0.14 1.44 8.06 -2.91 -0.02 1.42 16 51 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 52 H 0.11 -0.95 7.65 -2.39 -0.02 -0.96 16 Total: 0.00 -26.85 440.14 -1.38 -28.24 By element: Atomic # 1 Polarization: -13.99 SS G_CDS: -1.03 Total: -15.02 kcal Atomic # 6 Polarization: 7.17 SS G_CDS: 6.03 Total: 13.20 kcal Atomic # 7 Polarization: 0.38 SS G_CDS: -5.81 Total: -5.44 kcal Atomic # 8 Polarization: -18.10 SS G_CDS: -2.30 Total: -20.40 kcal Atomic # 9 Polarization: 0.21 SS G_CDS: 0.75 Total: 0.95 kcal Atomic # 14 Polarization: -2.84 SS G_CDS: 2.12 Total: -0.72 kcal Atomic # 16 Polarization: 0.33 SS G_CDS: -1.14 Total: -0.81 kcal Total: -26.85 -1.38 -28.24 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16498590_6894386.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.818 kcal (2) G-P(sol) polarization free energy of solvation -26.854 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -137.672 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.238 kcal (6) G-S(sol) free energy of system = (1) + (5) -139.055 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.77 seconds