Wall clock time and date at job start Thu Mar 4 2021 15:38:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.35532 * 125.67556 * 2 1 4 4 C 1.35461 * 108.87097 * 180.13114 * 3 2 1 5 5 C 1.50699 * 126.06767 * 179.89135 * 4 3 2 6 6 O 1.42902 * 109.47149 * 299.71714 * 5 4 3 7 7 Si 1.86302 * 109.47076 * 179.71608 * 5 4 3 8 8 C 1.39833 * 107.86024 * 359.63188 * 4 3 2 9 9 C 1.37654 * 125.68015 * 179.71624 * 2 1 3 10 10 C 1.46675 * 126.22906 * 0.04096 * 9 2 1 11 11 O 1.21694 * 120.00356 * 354.25472 * 10 9 2 12 12 N 1.34785 * 119.99727 * 174.26159 * 10 9 2 13 13 C 1.46498 * 119.99913 * 185.11898 * 12 10 9 14 14 C 1.52997 * 109.47050 * 180.02562 * 13 12 10 15 15 F 1.39903 * 112.84905 * 316.19448 * 14 13 12 16 16 C 1.53783 * 113.61638 * 87.50186 * 14 13 12 17 17 C 1.53790 * 87.08074 * 139.98127 * 16 14 13 18 18 H 1.09000 * 113.61164 * 89.11687 * 17 16 14 19 19 N 1.46497 * 113.60978 * 220.01742 * 17 16 14 20 20 C 1.34773 * 119.99843 * 252.49238 * 19 17 16 21 21 O 1.21507 * 120.00307 * 0.02562 * 20 19 17 22 22 O 1.34641 * 119.99890 * 180.02562 * 20 19 17 23 23 C 1.45203 * 116.99934 * 180.02562 * 22 20 19 24 24 C 1.53000 * 109.47176 * 60.00254 * 23 22 20 25 25 C 1.52997 * 109.46954 * 179.97438 * 23 22 20 26 26 C 1.53000 * 109.47072 * 299.99953 * 23 22 20 27 27 C 1.53776 * 113.61548 * 185.00186 * 14 13 12 28 28 H 1.09006 * 109.46496 * 274.19739 * 1 2 3 29 29 H 1.08997 * 109.47469 * 34.19996 * 1 2 3 30 30 H 1.09001 * 109.47151 * 154.20779 * 1 2 3 31 31 H 1.07994 * 125.56601 * 359.97438 * 3 2 1 32 32 H 1.08993 * 109.47031 * 59.71314 * 5 4 3 33 33 H 0.96702 * 114.00174 * 299.99903 * 6 5 4 34 34 H 1.48498 * 109.99842 * 58.68091 * 7 5 4 35 35 H 1.48500 * 109.99877 * 179.97438 * 7 5 4 36 36 H 1.08002 * 126.45102 * 180.21189 * 8 4 3 37 37 H 0.97001 * 119.99551 * 5.11906 * 12 10 9 38 38 H 1.09000 * 109.47186 * 299.99610 * 13 12 10 39 39 H 1.08999 * 109.47312 * 59.99744 * 13 12 10 40 40 H 1.08997 * 113.61419 * 254.52739 * 16 14 13 41 41 H 1.08994 * 113.61365 * 25.43463 * 16 14 13 42 42 H 0.97002 * 119.99957 * 72.50417 * 19 17 16 43 43 H 1.09001 * 109.47404 * 59.99698 * 24 23 22 44 44 H 1.08994 * 109.47150 * 180.02562 * 24 23 22 45 45 H 1.09007 * 109.46909 * 299.99894 * 24 23 22 46 46 H 1.08999 * 109.47354 * 59.99887 * 25 23 22 47 47 H 1.08998 * 109.47300 * 180.02562 * 25 23 22 48 48 H 1.09001 * 109.47068 * 299.99960 * 25 23 22 49 49 H 1.08998 * 109.46988 * 60.00143 * 26 23 22 50 50 H 1.09004 * 109.46677 * 179.97438 * 26 23 22 51 51 H 1.08999 * 109.46935 * 299.99929 * 26 23 22 52 52 H 1.08999 * 113.61332 * 334.56337 * 27 14 13 53 53 H 1.09006 * 113.62053 * 105.46611 * 27 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5522 0.7093 -0.0029 5 6 4.7537 1.6190 -0.0063 6 8 4.7275 2.4384 -1.1767 7 14 6.3090 0.5934 -0.0008 8 6 3.5780 -0.6887 0.0037 9 6 2.2679 -1.1181 0.0055 10 6 1.8124 -2.5124 0.0116 11 8 0.6267 -2.7647 0.1176 12 7 2.7073 -3.5141 -0.1001 13 6 2.2455 -4.9003 -0.2069 14 6 3.4531 -5.8328 -0.3207 15 9 4.4281 -5.3539 -1.2024 16 6 4.0157 -6.2808 1.0386 17 6 4.2081 -7.6720 0.4117 18 1 5.1752 -7.8020 -0.0740 19 7 3.8710 -8.7745 1.3156 20 6 4.8498 -9.5329 1.8477 21 8 6.0119 -9.3019 1.5782 22 8 4.5400 -10.5465 2.6780 23 6 5.6452 -11.3207 3.2142 24 6 6.5706 -10.4020 4.0145 25 6 5.1014 -12.4191 4.1299 26 6 6.4280 -11.9565 2.0636 27 6 3.0750 -7.3039 -0.5606 28 1 -0.3632 0.0752 1.0250 29 1 -0.3634 0.8499 -0.5776 30 1 -0.3633 -0.9253 -0.4471 31 1 1.9082 2.1235 -0.0004 32 1 4.7327 2.2519 0.8808 33 1 4.7441 1.9408 -2.0057 34 1 6.3344 -0.2970 -1.1890 35 1 7.5012 1.4788 -0.0047 36 1 4.4584 -1.3143 0.0067 37 1 3.6570 -3.3171 -0.1096 38 1 1.6684 -5.1604 0.6804 39 1 1.6187 -5.0072 -1.0922 40 1 4.9510 -5.7899 1.3072 41 1 3.2804 -6.2623 1.8429 42 1 2.9433 -8.9587 1.5310 43 1 6.0129 -9.9491 4.8342 44 1 7.4004 -10.9831 4.4165 45 1 6.9580 -9.6192 3.3623 46 1 4.4418 -13.0737 3.5602 47 1 5.9310 -13.0001 4.5328 48 1 4.5439 -11.9658 4.9496 49 1 6.8154 -11.1736 1.4115 50 1 7.2580 -12.5373 2.4661 51 1 5.7687 -12.6110 1.4935 52 1 2.0825 -7.5651 -0.1933 53 1 3.2508 -7.6389 -1.5829 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16499080_10803934.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:38:02 Heat of formation + Delta-G solvation = -116.500562 kcal Electronic energy + Delta-G solvation = -35879.062933 eV Core-core repulsion = 30861.998001 eV Total energy + Delta-G solvation = -5017.064932 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -48.89139 -42.55364 -41.86822 -40.39965 -39.75090 -37.90851 -37.80668 -36.02797 -35.29376 -34.14996 -33.78356 -31.21630 -28.92382 -28.36764 -28.32630 -28.29400 -27.07591 -25.72682 -24.92016 -23.50054 -22.45323 -21.48902 -21.15458 -20.89788 -20.49988 -19.25963 -19.15642 -17.90759 -17.50483 -17.34269 -17.25051 -17.13526 -17.04774 -16.76634 -16.36930 -16.14495 -15.91567 -15.65514 -15.53900 -15.38186 -15.35103 -15.27169 -14.96173 -14.59341 -14.47879 -14.43532 -13.95652 -13.93314 -13.68637 -13.55478 -13.34567 -13.26301 -13.16504 -13.15135 -12.95071 -12.92965 -12.86487 -12.77562 -12.43977 -12.35006 -12.29978 -11.87141 -11.76905 -11.45578 -11.39750 -11.15152 -11.11231 -10.53606 -10.32525 -10.21560 -9.75424 -9.24528 -4.84719 0.37560 1.13126 1.38371 1.53483 1.58858 1.70805 1.71840 2.03257 2.23955 2.26040 2.97202 3.06023 3.07993 3.26733 3.52723 3.54503 3.59468 3.66445 3.74137 3.79777 3.89026 3.94462 4.05675 4.19622 4.22646 4.34108 4.35737 4.39995 4.52451 4.56288 4.58962 4.61208 4.61380 4.68668 4.73024 4.73433 4.74577 4.76699 4.81742 4.86532 4.87877 4.89415 5.01968 5.11248 5.14846 5.23564 5.27149 5.29931 5.40039 5.58048 5.65155 5.89445 6.15263 6.35041 6.37546 6.59401 7.02646 7.32534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.414 5.414 3 C 0.050 3.950 4 C -0.216 4.216 5 C -0.043 4.043 6 O -0.552 6.552 7 Si 0.764 3.236 8 C -0.127 4.127 9 C -0.074 4.074 10 C 0.591 3.409 11 O -0.577 6.577 12 N -0.710 5.710 13 C 0.119 3.881 14 C 0.088 3.912 15 F -0.194 7.194 16 C -0.161 4.161 17 C 0.138 3.862 18 H 0.105 0.895 19 N -0.686 5.686 20 C 0.644 3.356 21 O -0.593 6.593 22 O -0.368 6.368 23 C 0.128 3.872 24 C -0.180 4.180 25 C -0.138 4.138 26 C -0.181 4.181 27 C -0.143 4.143 28 H 0.084 0.916 29 H 0.105 0.895 30 H 0.088 0.912 31 H 0.189 0.811 32 H 0.121 0.879 33 H 0.384 0.616 34 H -0.283 1.283 35 H -0.308 1.308 36 H 0.166 0.834 37 H 0.414 0.586 38 H 0.104 0.896 39 H 0.081 0.919 40 H 0.086 0.914 41 H 0.125 0.875 42 H 0.421 0.579 43 H 0.063 0.937 44 H 0.085 0.915 45 H 0.064 0.936 46 H 0.069 0.931 47 H 0.097 0.903 48 H 0.070 0.930 49 H 0.063 0.937 50 H 0.086 0.914 51 H 0.062 0.938 52 H 0.138 0.862 53 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.890 -2.951 3.043 5.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.086 5.086 3 C -0.087 4.087 4 C -0.222 4.222 5 C -0.153 4.153 6 O -0.360 6.360 7 Si 0.671 3.329 8 C -0.154 4.154 9 C -0.187 4.187 10 C 0.380 3.620 11 O -0.459 6.459 12 N -0.362 5.362 13 C -0.004 4.004 14 C 0.068 3.932 15 F -0.175 7.175 16 C -0.200 4.200 17 C 0.034 3.966 18 H 0.123 0.877 19 N -0.346 5.346 20 C 0.397 3.603 21 O -0.484 6.484 22 O -0.283 6.283 23 C 0.092 3.908 24 C -0.237 4.237 25 C -0.195 4.195 26 C -0.238 4.238 27 C -0.182 4.182 28 H 0.103 0.897 29 H 0.123 0.877 30 H 0.106 0.894 31 H 0.206 0.794 32 H 0.139 0.861 33 H 0.233 0.767 34 H -0.210 1.210 35 H -0.237 1.237 36 H 0.183 0.817 37 H 0.251 0.749 38 H 0.122 0.878 39 H 0.099 0.901 40 H 0.105 0.895 41 H 0.143 0.857 42 H 0.259 0.741 43 H 0.082 0.918 44 H 0.104 0.896 45 H 0.083 0.917 46 H 0.088 0.912 47 H 0.116 0.884 48 H 0.089 0.911 49 H 0.082 0.918 50 H 0.104 0.896 51 H 0.081 0.919 52 H 0.156 0.844 53 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.804 -2.909 3.020 5.045 hybrid contribution -0.055 0.523 -1.296 1.399 sum -2.859 -2.386 1.724 4.104 Atomic orbital electron populations 1.22405 0.75009 1.05687 1.04671 1.44091 1.07605 1.04907 1.51966 1.22256 0.89959 0.92195 1.04300 1.19800 0.94692 0.93886 1.13821 1.24442 1.02825 0.97716 0.90366 1.86547 1.95814 1.36912 1.16734 0.94181 0.72672 0.78679 0.87413 1.21434 0.94781 0.94882 1.04264 1.19984 0.90814 0.87588 1.20331 1.17048 0.85166 0.84055 0.75683 1.90788 1.17504 1.85272 1.52327 1.45418 1.10521 1.05867 1.74358 1.21868 0.94975 0.78924 1.04674 1.21812 0.86721 0.94254 0.90392 1.92883 1.64505 1.89546 1.70525 1.24251 1.03967 0.95385 0.96385 1.22454 1.00087 0.83874 0.90221 0.87742 1.44601 1.09039 1.32150 1.48784 1.18419 0.84792 0.79116 0.77955 1.90917 1.19429 1.73101 1.64962 1.86315 1.40968 1.42222 1.58772 1.22340 0.84372 0.90440 0.93688 1.22474 1.00178 1.00809 1.00267 1.21892 1.02938 0.96178 0.98504 1.22478 1.01118 1.01566 0.98618 1.24010 1.01020 0.91279 1.01858 0.89720 0.87686 0.89351 0.79445 0.86098 0.76702 1.20965 1.23676 0.81715 0.74861 0.87771 0.90062 0.89520 0.85724 0.74121 0.91832 0.89599 0.91717 0.91177 0.88424 0.91113 0.91771 0.89566 0.91934 0.84430 0.88369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.07 10.64 127.77 1.36 1.29 16 2 N -0.41 -0.81 3.16 -534.31 -1.69 -2.50 16 3 C 0.05 0.01 11.29 83.48 0.94 0.95 16 4 C -0.22 -0.03 5.41 -20.12 -0.11 -0.14 16 5 C -0.04 0.03 3.00 71.24 0.21 0.24 16 6 O -0.55 -1.39 12.88 -148.98 -1.92 -3.31 16 7 Si 0.76 -0.99 30.64 68.60 2.10 1.11 16 8 C -0.13 0.02 8.84 22.57 0.20 0.22 16 9 C -0.07 -0.23 6.88 40.35 0.28 0.05 16 10 C 0.59 2.36 7.77 86.44 0.67 3.03 16 11 O -0.58 -5.46 14.67 -4.33 -0.06 -5.53 16 12 N -0.71 1.21 5.44 -467.08 -2.54 -1.33 16 13 C 0.12 -0.57 5.43 86.38 0.47 -0.10 16 14 C 0.09 -0.52 1.74 -10.27 -0.02 -0.54 16 15 F -0.19 0.11 16.58 44.97 0.75 0.86 16 16 C -0.16 1.03 7.32 31.12 0.23 1.26 16 17 C 0.14 -0.55 4.22 45.52 0.19 -0.36 16 18 H 0.10 0.13 7.47 -2.39 -0.02 0.11 16 19 N -0.69 2.03 5.36 -567.60 -3.04 -1.01 16 20 C 0.64 2.88 8.06 129.79 1.05 3.93 16 21 O -0.59 -6.12 11.48 19.82 0.23 -5.89 16 22 O -0.37 -1.34 9.94 -55.50 -0.55 -1.89 16 23 C 0.13 0.22 1.13 -10.79 -0.01 0.21 16 24 C -0.18 -0.38 8.37 71.98 0.60 0.23 16 25 C -0.14 0.42 8.85 71.98 0.64 1.06 16 26 C -0.18 -0.42 8.37 71.98 0.60 0.18 16 27 C -0.14 1.23 7.29 31.12 0.23 1.46 16 28 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 29 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 30 H 0.09 0.24 6.23 -2.39 -0.01 0.22 16 31 H 0.19 -0.72 8.06 -2.91 -0.02 -0.75 16 32 H 0.12 -0.28 7.96 -2.39 -0.02 -0.30 16 33 H 0.38 -0.91 8.70 -74.06 -0.64 -1.56 16 34 H -0.28 -0.77 7.11 99.48 0.71 -0.07 16 35 H -0.31 -2.10 7.11 99.48 0.71 -1.39 16 36 H 0.17 -0.81 5.77 -2.91 -0.02 -0.83 16 37 H 0.41 -1.85 6.93 -92.71 -0.64 -2.50 16 38 H 0.10 -0.67 7.84 -2.39 -0.02 -0.69 16 39 H 0.08 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 41 H 0.12 -1.16 7.89 -2.39 -0.02 -1.18 16 42 H 0.42 -3.49 8.84 -92.71 -0.82 -4.31 16 43 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 44 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.06 0.47 5.88 -2.38 -0.01 0.46 16 46 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 47 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 48 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 49 H 0.06 0.49 5.88 -2.39 -0.01 0.47 16 50 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 51 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 52 H 0.14 -1.87 8.08 -2.39 -0.02 -1.89 16 53 H 0.10 -0.77 8.14 -2.38 -0.02 -0.79 16 Total: 0.00 -23.93 432.19 -0.30 -24.23 By element: Atomic # 1 Polarization: -16.61 SS G_CDS: -1.10 Total: -17.71 kcal Atomic # 6 Polarization: 5.44 SS G_CDS: 7.53 Total: 12.97 kcal Atomic # 7 Polarization: 2.43 SS G_CDS: -7.27 Total: -4.84 kcal Atomic # 8 Polarization: -14.31 SS G_CDS: -2.31 Total: -16.62 kcal Atomic # 9 Polarization: 0.11 SS G_CDS: 0.75 Total: 0.86 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: 2.10 Total: 1.11 kcal Total: -23.93 -0.30 -24.23 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16499080_10803934.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.271 kcal (2) G-P(sol) polarization free energy of solvation -23.928 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.199 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.302 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.230 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds