Wall clock time and date at job start Thu Mar 4 2021 15:38:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37651 * 125.67924 * 2 1 4 4 C 1.46672 * 126.23241 * 359.96164 * 3 2 1 5 5 O 1.21695 * 120.00261 * 4.47681 * 4 3 2 6 6 N 1.34785 * 119.99928 * 184.47377 * 4 3 2 7 7 C 1.46505 * 119.99818 * 174.66505 * 6 4 3 8 8 C 1.53000 * 109.46896 * 179.97438 * 7 6 4 9 9 F 1.39905 * 112.85135 * 316.19959 * 8 7 6 10 10 C 1.53956 * 113.74033 * 87.40108 * 8 7 6 11 11 C 1.53778 * 87.01631 * 139.94645 * 10 8 7 12 12 H 1.08998 * 113.62004 * 89.23332 * 11 10 8 13 13 N 1.46501 * 113.61346 * 220.04908 * 11 10 8 14 14 C 1.34781 * 120.00174 * 254.41178 * 13 11 10 15 15 O 1.21511 * 119.99650 * 359.72464 * 14 13 11 16 16 O 1.34635 * 120.00160 * 179.72605 * 14 13 11 17 17 C 1.45196 * 117.00060 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.47274 * 59.99712 * 17 16 14 19 19 C 1.53001 * 109.46869 * 179.97438 * 17 16 14 20 20 C 1.53001 * 109.46793 * 299.99621 * 17 16 14 21 21 C 1.53774 * 113.61555 * 184.99858 * 8 7 6 22 22 C 1.37871 * 107.53003 * 179.70550 * 3 2 1 23 23 C 1.39832 * 107.08726 * 0.25735 * 22 3 2 24 24 C 1.35454 * 107.86654 * 0.02562 * 23 22 3 25 25 C 1.50697 * 125.56461 * 180.02562 * 24 23 22 26 26 O 1.42892 * 109.47025 * 209.97383 * 25 24 23 27 27 Si 1.86294 * 109.47252 * 329.97922 * 25 24 23 28 28 H 1.09002 * 109.47278 * 93.00313 * 1 2 3 29 29 H 1.08996 * 109.47267 * 213.00991 * 1 2 3 30 30 H 1.09010 * 109.47093 * 333.00996 * 1 2 3 31 31 H 0.96996 * 120.00150 * 354.66578 * 6 4 3 32 32 H 1.09003 * 109.46669 * 60.00565 * 7 6 4 33 33 H 1.08997 * 109.46905 * 300.00253 * 7 6 4 34 34 H 1.09002 * 113.61198 * 25.42685 * 10 8 7 35 35 H 1.09002 * 113.66599 * 254.46916 * 10 8 7 36 36 H 0.97005 * 120.00130 * 74.14031 * 13 11 10 37 37 H 1.09000 * 109.46892 * 59.99943 * 18 17 16 38 38 H 1.08994 * 109.47305 * 180.02562 * 18 17 16 39 39 H 1.09001 * 109.46912 * 300.00346 * 18 17 16 40 40 H 1.08994 * 109.47288 * 60.00212 * 19 17 16 41 41 H 1.09003 * 109.46976 * 179.97438 * 19 17 16 42 42 H 1.08994 * 109.47417 * 299.99326 * 19 17 16 43 43 H 1.08999 * 109.47408 * 60.00549 * 20 17 16 44 44 H 1.09003 * 109.46810 * 180.02562 * 20 17 16 45 45 H 1.08994 * 109.47561 * 299.99908 * 20 17 16 46 46 H 1.09000 * 113.61398 * 105.38642 * 21 8 7 47 47 H 1.09001 * 113.69307 * 334.50302 * 21 8 7 48 48 H 1.08009 * 126.45323 * 180.29842 * 22 3 2 49 49 H 1.08007 * 126.06513 * 180.02562 * 23 22 3 50 50 H 1.09004 * 109.46548 * 89.97351 * 25 24 23 51 51 H 0.96709 * 114.00068 * 180.02562 * 26 25 24 52 52 H 1.48501 * 109.99923 * 178.67782 * 27 25 24 53 53 H 1.48503 * 109.99894 * 299.99551 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2678 1.1181 0.0000 4 6 1.8124 2.5124 -0.0008 5 8 0.6247 2.7646 0.0807 6 7 2.7095 3.5142 -0.0917 7 6 2.2500 4.9003 -0.2104 8 6 3.4597 5.8330 -0.2960 9 9 4.4624 5.5083 0.6241 10 6 3.9836 6.0388 -1.7290 11 6 4.1913 7.5158 -1.3550 12 1 5.1721 7.7244 -0.9278 13 7 3.8266 8.4487 -2.4241 14 6 4.7892 9.0727 -3.1316 15 8 5.9596 8.8653 -2.8793 16 8 4.4540 9.9259 -4.1177 17 6 5.5429 10.5614 -4.8379 18 6 6.4113 9.4894 -5.4993 19 6 4.9710 11.4883 -5.9125 20 6 6.3935 11.3759 -3.8612 21 6 3.0880 7.3252 -0.3009 22 6 3.5779 0.6887 0.0068 23 6 3.5520 -0.7094 0.0048 24 6 2.2554 -1.1010 -0.0035 25 6 1.7708 -2.5279 -0.0076 26 8 0.5167 -2.6030 -0.6885 27 14 3.0164 -3.6043 -0.8796 28 1 -0.3634 -0.0538 -1.0263 29 1 -0.3633 -0.8617 0.5598 30 1 -0.3634 0.9158 0.4664 31 1 3.6592 3.3176 -0.0787 32 1 1.6519 5.1608 0.6630 33 1 1.6443 5.0065 -1.1103 34 1 3.2257 5.8852 -2.4972 35 1 4.9118 5.5062 -1.9362 36 1 2.8922 8.6144 -2.6254 37 1 5.8053 8.9092 -6.1950 38 1 7.2289 9.9664 -6.0395 39 1 6.8186 8.8287 -4.7339 40 1 4.3522 12.2521 -5.4418 41 1 5.7884 11.9658 -6.4529 42 1 4.3653 10.9078 -6.6083 43 1 6.8009 10.7153 -3.0959 44 1 7.2107 11.8534 -4.4019 45 1 5.7749 12.1396 -3.3901 46 1 3.2942 7.8296 0.6431 47 1 2.0849 7.5254 -0.6775 48 1 4.4583 1.3143 0.0131 49 1 4.4132 -1.3613 0.0092 50 1 1.6481 -2.8729 1.0191 51 1 0.1441 -3.4945 -0.7294 52 1 2.5654 -5.0191 -0.8626 53 1 3.1928 -3.1443 -2.2806 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16499080_10803936.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:38:06 Heat of formation + Delta-G solvation = -117.107118 kcal Electronic energy + Delta-G solvation = -35803.809497 eV Core-core repulsion = 30786.718263 eV Total energy + Delta-G solvation = -5017.091234 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.194 amu Computer time = 1.58 seconds Orbital eigenvalues (eV) -48.90382 -42.56296 -41.88756 -40.43200 -39.77404 -37.91235 -37.83968 -36.05487 -35.30922 -34.09663 -33.68778 -31.76447 -29.30846 -28.38236 -28.31583 -27.48594 -27.12109 -26.54402 -24.70391 -23.14467 -22.51324 -21.54515 -21.38162 -20.78224 -20.28439 -19.22378 -19.02647 -18.51422 -17.85798 -17.44522 -17.26506 -17.14235 -17.02019 -16.88263 -16.38567 -16.27397 -16.00103 -15.73748 -15.50896 -15.37820 -15.26261 -15.09787 -14.59698 -14.47059 -14.45684 -14.38161 -13.98508 -13.94948 -13.63192 -13.58094 -13.36116 -13.30565 -13.27930 -12.99555 -12.96931 -12.94079 -12.88097 -12.79274 -12.73251 -12.45746 -12.31684 -12.10597 -11.82584 -11.48164 -11.41387 -11.19907 -11.13766 -10.77161 -10.34338 -10.23828 -9.75749 -9.07501 -4.87479 0.33342 1.10868 1.16511 1.55242 1.68209 1.69264 1.73999 2.02251 2.27892 2.28947 2.94169 3.03626 3.05675 3.12629 3.24660 3.51735 3.56919 3.65461 3.72626 3.75071 3.78258 3.92949 3.95284 4.18831 4.28718 4.32418 4.37824 4.40747 4.50223 4.53679 4.54249 4.56770 4.58444 4.59955 4.65778 4.71701 4.75251 4.79500 4.84516 4.86370 4.86635 4.99997 5.07513 5.13080 5.16009 5.22145 5.25736 5.28144 5.37774 5.56095 5.73730 5.98686 6.12795 6.35015 6.35514 6.50591 7.02036 7.30357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.406 5.406 3 C -0.090 4.090 4 C 0.590 3.410 5 O -0.583 6.583 6 N -0.707 5.707 7 C 0.119 3.881 8 C 0.090 3.910 9 F -0.192 7.192 10 C -0.162 4.162 11 C 0.140 3.860 12 H 0.106 0.894 13 N -0.687 5.687 14 C 0.644 3.356 15 O -0.593 6.593 16 O -0.368 6.368 17 C 0.127 3.873 18 C -0.180 4.180 19 C -0.138 4.138 20 C -0.180 4.180 21 C -0.142 4.142 22 C -0.124 4.124 23 C -0.206 4.206 24 C 0.045 3.955 25 C -0.069 4.069 26 O -0.561 6.561 27 Si 0.807 3.193 28 H 0.066 0.934 29 H 0.097 0.903 30 H 0.085 0.915 31 H 0.416 0.584 32 H 0.081 0.919 33 H 0.100 0.900 34 H 0.121 0.879 35 H 0.085 0.915 36 H 0.420 0.580 37 H 0.062 0.938 38 H 0.086 0.914 39 H 0.064 0.936 40 H 0.069 0.931 41 H 0.098 0.902 42 H 0.069 0.931 43 H 0.063 0.937 44 H 0.086 0.914 45 H 0.062 0.938 46 H 0.100 0.900 47 H 0.137 0.863 48 H 0.174 0.826 49 H 0.186 0.814 50 H 0.103 0.897 51 H 0.400 0.600 52 H -0.279 1.279 53 H -0.309 1.309 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.845 -1.008 -0.172 1.327 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.079 5.079 3 C -0.203 4.203 4 C 0.380 3.620 5 O -0.465 6.465 6 N -0.359 5.359 7 C -0.005 4.005 8 C 0.071 3.929 9 F -0.173 7.173 10 C -0.201 4.201 11 C 0.035 3.965 12 H 0.124 0.876 13 N -0.346 5.346 14 C 0.397 3.603 15 O -0.484 6.484 16 O -0.283 6.283 17 C 0.091 3.909 18 C -0.237 4.237 19 C -0.195 4.195 20 C -0.237 4.237 21 C -0.181 4.181 22 C -0.151 4.151 23 C -0.230 4.230 24 C -0.073 4.073 25 C -0.176 4.176 26 O -0.372 6.372 27 Si 0.710 3.290 28 H 0.085 0.915 29 H 0.115 0.885 30 H 0.104 0.896 31 H 0.253 0.747 32 H 0.099 0.901 33 H 0.118 0.882 34 H 0.139 0.861 35 H 0.103 0.897 36 H 0.258 0.742 37 H 0.081 0.919 38 H 0.105 0.895 39 H 0.083 0.917 40 H 0.088 0.912 41 H 0.116 0.884 42 H 0.088 0.912 43 H 0.082 0.918 44 H 0.105 0.895 45 H 0.081 0.919 46 H 0.119 0.881 47 H 0.155 0.845 48 H 0.191 0.809 49 H 0.203 0.797 50 H 0.121 0.879 51 H 0.252 0.748 52 H -0.205 1.205 53 H -0.237 1.237 Dipole moment (debyes) X Y Z Total from point charges 0.464 -0.709 -0.756 1.135 hybrid contribution -1.158 -0.343 -0.121 1.214 sum -0.694 -1.052 -0.877 1.535 Atomic orbital electron populations 1.22146 0.75855 1.04594 1.03443 1.43899 1.07251 1.04678 1.52111 1.20172 0.91556 0.87283 1.21275 1.17105 0.85160 0.84208 0.75534 1.90767 1.17690 1.85341 1.52742 1.45369 1.10434 1.05677 1.74446 1.21861 0.95115 0.78914 1.04604 1.21814 0.85978 0.96172 0.88959 1.92883 1.62488 1.93760 1.68133 1.24275 1.03986 0.96296 0.95558 1.22442 1.00116 0.87197 0.86698 0.87615 1.44616 1.08985 1.45500 1.35549 1.18414 0.84775 0.78066 0.79012 1.90916 1.18568 1.67899 1.71002 1.86313 1.41030 1.55479 1.45454 1.22352 0.84808 0.92427 0.91314 1.22471 1.00571 0.99335 1.01340 1.21890 1.02772 0.98332 0.96494 1.22475 1.00706 1.00246 1.00320 1.23993 1.01276 0.92102 1.00695 1.21697 0.94334 0.95804 1.03252 1.20958 0.95151 0.95576 1.11270 1.20603 0.91226 0.87660 1.07805 1.24886 0.93721 0.95958 1.03038 1.86526 1.35189 1.36171 1.79302 0.93433 0.83895 0.73444 0.78252 0.91531 0.88497 0.89608 0.74689 0.90071 0.88164 0.86079 0.89669 0.74163 0.91930 0.89531 0.91744 0.91152 0.88376 0.91173 0.91762 0.89516 0.91904 0.88095 0.84529 0.80909 0.79715 0.87922 0.74813 1.20510 1.23696 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.55 9.38 127.77 1.20 1.74 16 2 N -0.41 -3.11 3.16 -519.71 -1.64 -4.75 16 3 C -0.09 -0.62 6.89 40.35 0.28 -0.34 16 4 C 0.59 4.47 7.77 86.44 0.67 5.14 16 5 O -0.58 -8.00 14.60 -4.33 -0.06 -8.06 16 6 N -0.71 -0.48 5.43 -467.06 -2.54 -3.02 16 7 C 0.12 -0.30 5.44 86.38 0.47 0.16 16 8 C 0.09 -0.41 1.74 -10.21 -0.02 -0.43 16 9 F -0.19 -0.06 16.58 44.97 0.75 0.69 16 10 C -0.16 0.77 7.34 31.18 0.23 1.00 16 11 C 0.14 -0.41 4.19 45.52 0.19 -0.22 16 12 H 0.11 0.20 7.50 -2.39 -0.02 0.18 16 13 N -0.69 1.34 5.37 -567.61 -3.05 -1.71 16 14 C 0.64 3.42 8.06 129.79 1.05 4.46 16 15 O -0.59 -6.56 11.50 19.81 0.23 -6.33 16 16 O -0.37 -1.61 9.94 -55.45 -0.55 -2.16 16 17 C 0.13 0.30 1.13 -10.79 -0.01 0.29 16 18 C -0.18 -0.50 8.37 71.98 0.60 0.11 16 19 C -0.14 0.35 8.85 71.98 0.64 0.98 16 20 C -0.18 -0.50 8.37 71.98 0.60 0.10 16 21 C -0.14 1.07 7.28 31.12 0.23 1.30 16 22 C -0.12 -0.19 10.36 22.57 0.23 0.05 16 23 C -0.21 -0.05 9.37 22.01 0.21 0.16 16 24 C 0.05 0.16 6.17 41.34 0.26 0.42 16 25 C -0.07 0.12 2.88 71.23 0.21 0.32 16 26 O -0.56 -0.02 10.46 -148.98 -1.56 -1.58 16 27 Si 0.81 -3.08 31.10 68.60 2.13 -0.95 16 28 H 0.07 0.51 8.14 -2.39 -0.02 0.49 16 29 H 0.10 0.35 7.02 -2.39 -0.02 0.34 16 30 H 0.09 0.81 6.07 -2.38 -0.01 0.80 16 31 H 0.42 -1.13 6.93 -92.71 -0.64 -1.78 16 32 H 0.08 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.10 -0.41 7.86 -2.39 -0.02 -0.43 16 34 H 0.12 -0.87 7.91 -2.39 -0.02 -0.89 16 35 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 36 H 0.42 -3.02 8.82 -92.70 -0.82 -3.84 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.06 0.51 5.88 -2.39 -0.01 0.50 16 40 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 41 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 42 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 43 H 0.06 0.52 5.88 -2.39 -0.01 0.50 16 44 H 0.09 -0.04 8.14 -2.39 -0.02 -0.06 16 45 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 46 H 0.10 -0.72 8.14 -2.39 -0.02 -0.74 16 47 H 0.14 -1.68 8.07 -2.39 -0.02 -1.70 16 48 H 0.17 -0.84 7.45 -2.91 -0.02 -0.86 16 49 H 0.19 -1.33 6.85 -2.91 -0.02 -1.35 16 50 H 0.10 -0.61 7.96 -2.38 -0.02 -0.63 16 51 H 0.40 -3.33 8.74 -74.05 -0.65 -3.98 16 52 H -0.28 0.18 7.11 99.48 0.71 0.89 16 53 H -0.31 -1.75 7.11 99.48 0.71 -1.05 16 Total: 0.00 -27.06 428.45 -0.37 -27.43 By element: Atomic # 1 Polarization: -13.70 SS G_CDS: -1.10 Total: -14.80 kcal Atomic # 6 Polarization: 8.22 SS G_CDS: 7.02 Total: 15.24 kcal Atomic # 7 Polarization: -2.25 SS G_CDS: -7.23 Total: -9.47 kcal Atomic # 8 Polarization: -16.19 SS G_CDS: -1.94 Total: -18.13 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.75 Total: 0.69 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.13 Total: -0.95 kcal Total: -27.06 -0.37 -27.43 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16499080_10803936.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.677 kcal (2) G-P(sol) polarization free energy of solvation -27.059 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.430 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.58 seconds