Wall clock time and date at job start Thu Mar 4 2021 15:38:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.47290 * 2 1 4 4 C 1.53003 * 109.46932 * 240.00202 * 2 1 3 5 5 O 1.45200 * 109.47212 * 120.00519 * 2 1 3 6 6 C 1.34637 * 117.00110 * 59.99757 * 5 2 1 7 7 O 1.21509 * 119.99916 * 359.97438 * 6 5 2 8 8 N 1.34769 * 120.00049 * 180.02562 * 6 5 2 9 9 C 1.46497 * 120.00274 * 179.97438 * 8 6 5 10 10 H 1.09002 * 112.90477 * 336.24972 * 9 8 6 11 11 C 1.53779 * 113.61581 * 107.50145 * 9 8 6 12 12 C 1.53779 * 87.08402 * 139.98450 * 11 9 8 13 13 F 1.39901 * 113.61703 * 89.11572 * 12 11 9 14 14 C 1.53005 * 113.69064 * 220.00975 * 12 11 9 15 15 N 1.46496 * 109.46976 * 277.53025 * 14 12 11 16 16 C 1.34783 * 119.99918 * 179.97438 * 15 14 12 17 17 O 1.21567 * 119.99631 * 0.02562 * 16 15 14 18 18 C 1.47691 * 119.99742 * 180.02562 * 16 15 14 19 19 C 1.39819 * 120.16180 * 179.72657 * 18 16 15 20 20 F 1.35102 * 120.11556 * 0.02562 * 19 18 16 21 21 C 1.38327 * 119.77926 * 179.79195 * 19 18 16 22 22 C 1.38207 * 120.11370 * 0.48145 * 21 19 18 23 23 C 1.38458 * 120.33796 * 359.74831 * 22 21 19 24 24 C 1.50699 * 119.88824 * 179.97438 * 23 22 21 25 25 O 1.42895 * 109.47327 * 245.01915 * 24 23 22 26 26 Si 1.86304 * 109.47112 * 5.02261 * 24 23 22 27 27 C 1.37856 * 120.22099 * 0.02562 * 23 22 21 28 28 C 1.53784 * 113.61569 * 204.99925 * 9 8 6 29 29 H 1.08999 * 109.46905 * 299.99688 * 1 2 3 30 30 H 1.09008 * 109.47310 * 59.99529 * 1 2 3 31 31 H 1.08999 * 109.47620 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.46761 * 180.02562 * 3 2 1 33 33 H 1.08996 * 109.46995 * 300.00257 * 3 2 1 34 34 H 1.08999 * 109.46892 * 60.00304 * 3 2 1 35 35 H 1.08992 * 109.47299 * 300.00124 * 4 2 1 36 36 H 1.09005 * 109.46961 * 60.00559 * 4 2 1 37 37 H 1.08997 * 109.47043 * 180.02562 * 4 2 1 38 38 H 0.97009 * 120.00192 * 359.97438 * 8 6 5 39 39 H 1.09006 * 113.61307 * 25.43652 * 11 9 8 40 40 H 1.08999 * 113.69146 * 254.54138 * 11 9 8 41 41 H 1.08995 * 109.46928 * 37.53479 * 14 12 11 42 42 H 1.09006 * 109.46756 * 157.53156 * 14 12 11 43 43 H 0.96997 * 120.00352 * 0.02562 * 15 14 12 44 44 H 1.07999 * 119.94598 * 180.23265 * 21 19 18 45 45 H 1.07998 * 119.82823 * 179.76761 * 22 21 19 46 46 H 1.09004 * 109.47185 * 125.01866 * 24 23 22 47 47 H 0.96700 * 114.00251 * 180.02562 * 25 24 23 48 48 H 1.48503 * 109.99771 * 178.68026 * 26 24 23 49 49 H 1.48497 * 109.99880 * 299.99622 * 26 24 23 50 50 H 1.08004 * 120.06001 * 179.97438 * 27 23 22 51 51 H 1.09004 * 113.61451 * 105.47149 * 28 9 8 52 52 H 1.08994 * 113.61477 * 334.56451 * 28 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6846 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9508 -2.5094 0.5039 8 7 2.0672 -2.6656 2.4169 9 6 1.6731 -4.0667 2.5834 10 1 0.7593 -4.3172 2.0446 11 6 2.8210 -5.0619 2.3456 12 6 2.2721 -5.8596 3.5402 13 9 1.3094 -6.8104 3.1845 14 6 3.3611 -6.4291 4.4518 15 7 3.8655 -7.6826 3.8857 16 6 4.8370 -8.3666 4.5221 17 8 5.2942 -7.9436 5.5660 18 6 5.3458 -9.6300 3.9510 19 6 6.3575 -10.3395 4.6054 20 9 6.8733 -9.8720 5.7632 21 6 6.8252 -11.5242 4.0657 22 6 6.3013 -11.9999 2.8786 23 6 5.3027 -11.2988 2.2242 24 6 4.7391 -11.8266 0.9300 25 8 5.0556 -10.9232 -0.1309 26 14 5.4798 -13.4967 0.5654 27 6 4.8231 -10.1190 2.7519 28 6 1.6736 -4.5370 4.0476 29 1 -0.3633 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8900 31 1 -0.3634 -1.0276 -0.0005 32 1 3.1300 1.4424 -0.0005 33 1 1.6767 1.9564 -0.8899 34 1 1.6767 1.9563 0.8900 35 1 1.6766 -1.7488 -1.2494 36 1 1.6766 -0.2073 -2.1393 37 1 3.1299 -0.7216 -1.2491 38 1 2.6269 -2.2367 3.0832 39 1 3.8098 -4.6380 2.5210 40 1 2.7505 -5.5932 1.3965 41 1 4.1782 -5.7123 4.5332 42 1 2.9443 -6.6188 5.4409 43 1 3.5009 -8.0199 3.0526 44 1 7.6040 -12.0763 4.5708 45 1 6.6725 -12.9234 2.4595 46 1 3.6566 -11.9203 1.0166 47 1 4.7228 -11.1999 -0.9957 48 1 4.9083 -14.0422 -0.6920 49 1 6.9555 -13.3825 0.4449 50 1 4.0443 -9.5740 2.2390 51 1 0.6754 -4.6439 4.4722 52 1 2.3486 -3.9696 4.6882 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16499080_12335834.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:38:25 Heat of formation + Delta-G solvation = -180.078769 kcal Electronic energy + Delta-G solvation = -37764.579280 eV Core-core repulsion = 32368.040804 eV Total energy + Delta-G solvation = -5396.538476 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.174 amu Computer time = 1.73 seconds Orbital eigenvalues (eV) -50.02623 -48.93659 -41.90828 -41.35615 -40.12226 -39.71926 -37.92480 -37.61640 -36.06161 -35.31656 -34.05478 -32.87679 -32.42369 -29.19108 -28.39522 -28.32665 -27.13721 -26.62086 -25.58820 -24.64068 -23.08002 -22.40774 -21.70857 -21.42299 -20.71069 -19.38655 -19.22363 -18.61964 -18.38367 -18.10972 -17.70288 -17.29391 -17.25015 -17.04417 -16.91727 -16.71009 -16.34140 -16.19934 -15.94526 -15.82800 -15.63901 -15.51564 -15.37641 -15.33936 -14.71630 -14.51450 -14.48553 -14.46343 -14.08131 -13.98732 -13.82573 -13.64953 -13.37346 -13.32065 -13.29907 -12.99034 -12.96034 -12.89369 -12.84435 -12.76805 -12.47884 -12.44808 -12.33037 -11.86890 -11.82343 -11.51359 -11.42770 -11.22047 -11.15259 -10.52822 -10.50403 -10.28513 -10.20360 -9.83917 -4.90145 -0.53020 -0.04961 1.09604 1.28788 1.54997 1.62668 1.66987 1.81835 1.97589 2.42146 2.91502 2.99331 3.02376 3.03130 3.20417 3.25394 3.39375 3.49280 3.53391 3.56882 3.71325 3.72497 3.77009 3.91705 4.00471 4.10552 4.15497 4.28493 4.33196 4.47478 4.51309 4.53199 4.56019 4.58635 4.58792 4.69731 4.74014 4.75197 4.77010 4.79885 4.82674 4.84265 4.85216 4.91410 4.97712 5.10518 5.14749 5.15491 5.24366 5.26188 5.35791 5.54597 5.56832 6.20941 6.33389 6.58774 6.92983 7.28561 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.644 3.356 7 O -0.593 6.593 8 N -0.687 5.687 9 C 0.140 3.860 10 H 0.107 0.893 11 C -0.163 4.163 12 C 0.089 3.911 13 F -0.193 7.193 14 C 0.115 3.885 15 N -0.712 5.712 16 C 0.559 3.441 17 O -0.565 6.565 18 C -0.190 4.190 19 C 0.137 3.863 20 F -0.133 7.133 21 C -0.151 4.151 22 C -0.054 4.054 23 C -0.096 4.096 24 C -0.083 4.083 25 O -0.556 6.556 26 Si 0.761 3.239 27 C -0.027 4.027 28 C -0.142 4.142 29 H 0.062 0.938 30 H 0.086 0.914 31 H 0.063 0.937 32 H 0.069 0.931 33 H 0.098 0.902 34 H 0.070 0.930 35 H 0.064 0.936 36 H 0.086 0.914 37 H 0.061 0.939 38 H 0.421 0.579 39 H 0.121 0.879 40 H 0.084 0.916 41 H 0.102 0.898 42 H 0.082 0.918 43 H 0.413 0.587 44 H 0.170 0.830 45 H 0.164 0.836 46 H 0.106 0.894 47 H 0.398 0.602 48 H -0.288 1.288 49 H -0.292 1.292 50 H 0.154 0.846 51 H 0.101 0.899 52 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.467 -1.533 -2.263 3.103 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.398 3.602 7 O -0.484 6.484 8 N -0.346 5.346 9 C 0.036 3.964 10 H 0.125 0.875 11 C -0.202 4.202 12 C 0.070 3.930 13 F -0.173 7.173 14 C -0.009 4.009 15 N -0.365 5.365 16 C 0.347 3.653 17 O -0.444 6.444 18 C -0.194 4.194 19 C 0.116 3.884 20 F -0.112 7.112 21 C -0.169 4.169 22 C -0.071 4.071 23 C -0.096 4.096 24 C -0.191 4.191 25 O -0.367 6.367 26 Si 0.666 3.334 27 C -0.045 4.045 28 C -0.181 4.181 29 H 0.081 0.919 30 H 0.105 0.895 31 H 0.082 0.918 32 H 0.088 0.912 33 H 0.116 0.884 34 H 0.089 0.911 35 H 0.082 0.918 36 H 0.105 0.895 37 H 0.081 0.919 38 H 0.259 0.741 39 H 0.139 0.861 40 H 0.103 0.897 41 H 0.120 0.880 42 H 0.100 0.900 43 H 0.251 0.749 44 H 0.188 0.812 45 H 0.181 0.819 46 H 0.124 0.876 47 H 0.249 0.751 48 H -0.216 1.216 49 H -0.220 1.220 50 H 0.172 0.828 51 H 0.120 0.880 52 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.797 -1.528 -2.022 2.657 hybrid contribution -0.224 0.686 -0.998 1.232 sum -1.021 -0.842 -3.020 3.297 Atomic orbital electron populations 1.22477 0.94018 1.03708 1.03545 1.22352 0.94462 0.92569 0.81491 1.21894 1.02458 0.90891 1.04265 1.22474 1.01630 1.02259 0.97373 1.86316 1.71478 1.23236 1.47254 1.18408 0.78506 0.80747 0.82581 1.90914 1.42173 1.71051 1.44241 1.44608 1.54938 1.11873 1.23215 1.22438 0.98568 0.77729 0.97680 0.87515 1.24237 1.00834 0.96612 0.98510 1.21781 0.87234 0.86869 0.97160 1.92884 1.65178 1.66304 1.92936 1.21879 0.96012 0.86002 0.96971 1.45635 1.38684 1.24534 1.27600 1.18191 0.79486 0.83919 0.83706 1.90844 1.59466 1.69937 1.24198 1.20018 1.01962 0.97901 0.99505 1.18131 0.93454 0.94026 0.82757 1.91563 1.85088 1.88365 1.46147 1.21373 1.03052 0.94777 0.97722 1.21373 0.92927 0.99600 0.93242 1.19485 0.97833 0.95933 0.96352 1.24948 1.05010 1.03233 0.85930 1.86533 1.81405 1.48538 1.20200 0.94185 0.77133 0.76616 0.85479 1.21176 0.97608 0.94522 0.91236 1.24000 1.04887 0.92985 0.96195 0.91884 0.89509 0.91763 0.91185 0.88362 0.91128 0.91752 0.89515 0.91949 0.74141 0.86063 0.89704 0.88037 0.90011 0.74932 0.81230 0.81872 0.87612 0.75098 1.21556 1.21958 0.82812 0.88045 0.84543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.49 8.37 71.98 0.60 0.12 16 2 C 0.13 0.29 1.13 -10.79 -0.01 0.28 16 3 C -0.14 0.35 8.85 71.98 0.64 0.99 16 4 C -0.18 -0.49 8.37 71.98 0.60 0.11 16 5 O -0.37 -1.61 9.94 -55.46 -0.55 -2.16 16 6 C 0.64 3.39 8.06 129.79 1.05 4.43 16 7 O -0.59 -6.47 11.48 19.81 0.23 -6.24 16 8 N -0.69 1.33 5.36 -567.63 -3.04 -1.71 16 9 C 0.14 -0.42 4.22 45.52 0.19 -0.23 16 10 H 0.11 0.19 7.47 -2.39 -0.02 0.17 16 11 C -0.16 0.79 7.33 31.12 0.23 1.01 16 12 C 0.09 -0.41 1.67 -10.26 -0.02 -0.43 16 13 F -0.19 0.00 16.79 44.97 0.76 0.75 16 14 C 0.12 -0.28 5.37 86.38 0.46 0.18 16 15 N -0.71 -0.19 5.42 -466.12 -2.53 -2.71 16 16 C 0.56 4.06 7.77 86.74 0.67 4.74 16 17 O -0.56 -8.69 15.34 -3.93 -0.06 -8.75 16 18 C -0.19 -0.88 5.88 -20.06 -0.12 -0.99 16 19 C 0.14 0.83 7.29 22.67 0.17 1.00 16 20 F -0.13 -1.61 15.55 44.97 0.70 -0.91 16 21 C -0.15 0.09 10.01 22.28 0.22 0.31 16 22 C -0.05 0.18 8.66 22.31 0.19 0.37 16 23 C -0.10 0.23 5.38 -19.90 -0.11 0.12 16 24 C -0.08 0.48 2.79 71.24 0.20 0.67 16 25 O -0.56 1.58 12.81 -148.98 -1.91 -0.33 16 26 Si 0.76 -4.83 29.84 68.60 2.05 -2.78 16 27 C -0.03 0.02 9.16 22.52 0.21 0.23 16 28 C -0.14 1.06 7.29 31.12 0.23 1.29 16 29 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 30 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 31 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 34 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 35 H 0.06 0.51 5.88 -2.39 -0.01 0.49 16 36 H 0.09 -0.05 8.14 -2.38 -0.02 -0.07 16 37 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 38 H 0.42 -2.99 8.84 -92.70 -0.82 -3.81 16 39 H 0.12 -0.87 7.97 -2.38 -0.02 -0.89 16 40 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 41 H 0.10 -0.38 7.95 -2.39 -0.02 -0.40 16 42 H 0.08 -0.08 8.14 -2.38 -0.02 -0.09 16 43 H 0.41 -1.47 6.22 -92.71 -0.58 -2.04 16 44 H 0.17 -0.89 8.06 -2.91 -0.02 -0.91 16 45 H 0.16 -1.34 4.84 -2.91 -0.01 -1.35 16 46 H 0.11 -1.08 7.96 -2.38 -0.02 -1.10 16 47 H 0.40 -4.05 8.74 -74.06 -0.65 -4.69 16 48 H -0.29 0.34 7.11 99.48 0.71 1.05 16 49 H -0.29 -0.11 7.04 99.48 0.70 0.59 16 50 H 0.15 -0.79 6.41 -2.91 -0.02 -0.81 16 51 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 52 H 0.14 -1.66 8.08 -2.39 -0.02 -1.68 16 Total: 0.00 -27.57 429.97 0.04 -27.53 By element: Atomic # 1 Polarization: -15.89 SS G_CDS: -1.01 Total: -16.90 kcal Atomic # 6 Polarization: 8.81 SS G_CDS: 5.40 Total: 14.21 kcal Atomic # 7 Polarization: 1.15 SS G_CDS: -5.57 Total: -4.42 kcal Atomic # 8 Polarization: -15.19 SS G_CDS: -2.29 Total: -17.48 kcal Atomic # 9 Polarization: -1.62 SS G_CDS: 1.45 Total: -0.16 kcal Atomic # 14 Polarization: -4.83 SS G_CDS: 2.05 Total: -2.78 kcal Total: -27.57 0.04 -27.53 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16499080_12335834.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.547 kcal (2) G-P(sol) polarization free energy of solvation -27.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -180.119 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.532 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.079 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.73 seconds