Wall clock time and date at job start Thu Mar 4 2021 15:39:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47035 * 2 1 4 4 C 1.52993 * 109.47312 * 240.00053 * 2 1 3 5 5 O 1.45200 * 109.47032 * 119.99743 * 2 1 3 6 6 C 1.34633 * 117.00039 * 60.00357 * 5 2 1 7 7 O 1.21512 * 119.99772 * 359.97438 * 6 5 2 8 8 N 1.34773 * 120.00371 * 179.97438 * 6 5 2 9 9 C 1.46501 * 120.00122 * 179.97438 * 8 6 5 10 10 H 1.08993 * 112.90929 * 336.25213 * 9 8 6 11 11 C 1.53962 * 113.66387 * 107.55425 * 9 8 6 12 12 C 1.53782 * 87.11063 * 139.88885 * 11 9 8 13 13 F 1.39898 * 113.61430 * 89.18756 * 12 11 9 14 14 C 1.53003 * 113.61259 * 220.08801 * 12 11 9 15 15 N 1.46495 * 109.47094 * 277.49847 * 14 12 11 16 16 C 1.34779 * 120.00271 * 180.02562 * 15 14 12 17 17 O 1.21579 * 119.99594 * 359.97438 * 16 15 14 18 18 C 1.47693 * 120.00461 * 179.97438 * 16 15 14 19 19 C 1.39802 * 120.15369 * 179.97438 * 18 16 15 20 20 F 1.35098 * 120.08803 * 0.02562 * 19 18 16 21 21 C 1.38313 * 119.82918 * 179.97438 * 19 18 16 22 22 C 1.38187 * 120.14495 * 359.97438 * 21 19 18 23 23 C 1.50698 * 119.84217 * 179.97438 * 22 21 19 24 24 O 1.42903 * 109.47422 * 14.99898 * 23 22 21 25 25 Si 1.86304 * 109.47328 * 134.99882 * 23 22 21 26 26 C 1.38647 * 120.31724 * 0.02562 * 22 21 19 27 27 F 1.35105 * 119.92226 * 180.02562 * 26 22 21 28 28 C 1.38074 * 120.16284 * 359.74257 * 26 22 21 29 29 C 1.53781 * 87.08260 * 334.63747 * 12 11 9 30 30 H 1.09004 * 109.47089 * 300.00250 * 1 2 3 31 31 H 1.08995 * 109.47372 * 59.99926 * 1 2 3 32 32 H 1.08996 * 109.47428 * 180.02562 * 1 2 3 33 33 H 1.09001 * 109.47473 * 180.02562 * 3 2 1 34 34 H 1.09004 * 109.47329 * 300.00375 * 3 2 1 35 35 H 1.09004 * 109.47386 * 59.99932 * 3 2 1 36 36 H 1.09002 * 109.46800 * 300.00344 * 4 2 1 37 37 H 1.09000 * 109.47248 * 59.99428 * 4 2 1 38 38 H 1.08992 * 109.47507 * 180.02562 * 4 2 1 39 39 H 0.97002 * 120.00080 * 0.02562 * 8 6 5 40 40 H 1.08997 * 113.53543 * 25.33559 * 11 9 8 41 41 H 1.08998 * 113.73879 * 254.47157 * 11 9 8 42 42 H 1.08997 * 109.46667 * 37.49898 * 14 12 11 43 43 H 1.08999 * 109.46658 * 157.49792 * 14 12 11 44 44 H 0.97001 * 120.00139 * 0.02562 * 15 14 12 45 45 H 1.08001 * 119.92675 * 180.02562 * 21 19 18 46 46 H 1.09000 * 109.47236 * 254.99883 * 23 22 21 47 47 H 0.96696 * 113.99988 * 59.99295 * 24 23 22 48 48 H 1.48504 * 109.99815 * 179.97438 * 25 23 22 49 49 H 1.48503 * 109.99547 * 301.31637 * 25 23 22 50 50 H 1.08002 * 120.07224 * 180.25610 * 28 26 22 51 51 H 1.09002 * 113.61445 * 139.98212 * 29 12 11 52 52 H 1.09002 * 113.61408 * 270.79943 * 29 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0140 -0.6844 1.1856 6 6 1.6523 -1.9722 1.3384 7 8 0.9509 -2.5094 0.5040 8 7 2.0680 -2.6656 2.4167 9 6 1.6739 -4.0668 2.5832 10 1 0.7598 -4.3173 2.0450 11 6 2.8225 -5.0642 2.3455 12 6 2.2747 -5.8603 3.5418 13 9 1.3126 -6.8124 3.1880 14 6 3.3660 -6.4265 4.4525 15 7 3.8710 -7.6806 3.8882 16 6 4.8437 -8.3626 4.5248 17 8 5.3024 -7.9368 5.5671 18 6 5.3524 -9.6272 3.9562 19 6 6.3617 -10.3369 4.6136 20 9 6.8749 -9.8682 5.7721 21 6 6.8327 -11.5208 4.0754 22 6 6.3076 -12.0022 2.8913 23 6 6.8263 -13.2925 2.3107 24 8 7.5764 -13.9944 3.3041 25 14 5.3924 -14.3450 1.7566 26 6 5.3066 -11.3033 2.2343 27 9 4.7985 -11.7816 1.0774 28 6 4.8234 -10.1226 2.7625 29 6 1.6755 -4.5374 4.0473 30 1 -0.3633 0.5139 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3634 -1.0276 0.0005 33 1 3.1300 1.4426 -0.0005 34 1 1.6766 1.9564 -0.8900 35 1 1.6766 1.9564 0.8900 36 1 1.6766 -1.7489 -1.2492 37 1 1.6766 -0.2074 -2.1392 38 1 3.1299 -0.7216 -1.2490 39 1 2.6276 -2.2368 3.0829 40 1 3.8110 -4.6392 2.5196 41 1 2.7518 -5.5969 1.3972 42 1 4.1824 -5.7086 4.5309 43 1 2.9513 -6.6146 5.4428 44 1 3.5053 -8.0201 3.0564 45 1 7.6121 -12.0706 4.5821 46 1 7.4683 -13.0747 1.4572 47 1 7.0671 -14.2213 4.0942 48 1 5.8908 -15.6202 1.1815 49 1 4.4926 -14.6225 2.9050 50 1 4.0407 -9.5815 2.2516 51 1 0.6776 -4.6443 4.4726 52 1 2.3500 -3.9691 4.6878 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16499080_12360598.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:39:17 Heat of formation + Delta-G solvation = -222.516874 kcal Electronic energy + Delta-G solvation = -40197.849594 eV Core-core repulsion = 34330.016888 eV Total energy + Delta-G solvation = -5867.832706 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.164 amu Computer time = 1.60 seconds Orbital eigenvalues (eV) -50.31417 -50.12407 -48.89345 -41.87720 -41.35101 -40.12253 -39.74431 -37.91419 -37.77716 -36.06230 -35.29346 -34.04335 -33.14227 -31.45594 -29.49978 -28.37143 -28.30508 -27.64609 -27.07606 -24.93644 -24.22590 -23.67415 -22.52260 -21.92129 -21.43992 -20.74572 -19.77139 -19.20479 -19.05532 -18.63949 -18.13383 -17.76229 -17.46344 -17.37151 -17.22809 -17.21227 -16.96104 -16.68826 -16.54050 -16.23175 -15.98861 -15.92128 -15.82423 -15.71543 -15.57327 -15.36600 -15.31878 -15.05057 -14.64375 -14.45835 -14.44082 -14.12022 -13.94293 -13.84474 -13.60542 -13.34982 -13.27943 -13.26547 -12.99391 -12.95812 -12.93441 -12.87015 -12.78832 -12.66071 -12.44823 -12.30454 -12.10226 -11.84899 -11.47169 -11.40289 -11.30743 -11.14084 -11.11826 -10.41317 -10.24372 -10.20253 -9.76636 -4.81382 -0.80216 -0.29182 1.08445 1.12656 1.44186 1.54745 1.69558 1.76875 1.88657 2.26558 2.74769 2.80367 2.95695 3.02778 3.05485 3.11594 3.14747 3.24448 3.43179 3.53018 3.53568 3.58250 3.73664 3.79376 3.80498 3.94072 4.18008 4.22339 4.32312 4.34818 4.41356 4.50654 4.55949 4.57012 4.59511 4.61060 4.64870 4.72656 4.73169 4.74734 4.76360 4.80922 4.85753 4.87453 4.88064 5.00457 5.11572 5.16996 5.26785 5.28914 5.39005 5.39246 5.57449 6.20720 6.34112 6.36446 6.91281 7.31627 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.128 3.872 3 C -0.138 4.138 4 C -0.180 4.180 5 O -0.368 6.368 6 C 0.644 3.356 7 O -0.593 6.593 8 N -0.687 5.687 9 C 0.138 3.862 10 H 0.106 0.894 11 C -0.161 4.161 12 C 0.089 3.911 13 F -0.192 7.192 14 C 0.115 3.885 15 N -0.708 5.708 16 C 0.562 3.438 17 O -0.560 6.560 18 C -0.159 4.159 19 C 0.139 3.861 20 F -0.128 7.128 21 C -0.126 4.126 22 C -0.088 4.088 23 C -0.079 4.079 24 O -0.541 6.541 25 Si 0.743 3.257 26 C 0.085 3.915 27 F -0.092 7.092 28 C -0.068 4.068 29 C -0.144 4.144 30 H 0.061 0.939 31 H 0.086 0.914 32 H 0.064 0.936 33 H 0.070 0.930 34 H 0.097 0.903 35 H 0.069 0.931 36 H 0.064 0.936 37 H 0.085 0.915 38 H 0.062 0.938 39 H 0.420 0.580 40 H 0.123 0.877 41 H 0.088 0.912 42 H 0.105 0.895 43 H 0.081 0.919 44 H 0.415 0.585 45 H 0.168 0.832 46 H 0.149 0.851 47 H 0.391 0.609 48 H -0.287 1.287 49 H -0.284 1.284 50 H 0.184 0.816 51 H 0.098 0.902 52 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.155 3.346 -3.028 4.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.091 3.909 3 C -0.195 4.195 4 C -0.237 4.237 5 O -0.283 6.283 6 C 0.397 3.603 7 O -0.484 6.484 8 N -0.346 5.346 9 C 0.034 3.966 10 H 0.124 0.876 11 C -0.200 4.200 12 C 0.070 3.930 13 F -0.173 7.173 14 C -0.009 4.009 15 N -0.361 5.361 16 C 0.349 3.651 17 O -0.439 6.439 18 C -0.164 4.164 19 C 0.118 3.882 20 F -0.106 7.106 21 C -0.145 4.145 22 C -0.090 4.090 23 C -0.187 4.187 24 O -0.349 6.349 25 Si 0.646 3.354 26 C 0.065 3.935 27 F -0.070 7.070 28 C -0.087 4.087 29 C -0.183 4.183 30 H 0.080 0.920 31 H 0.104 0.896 32 H 0.083 0.917 33 H 0.089 0.911 34 H 0.116 0.884 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.104 0.896 38 H 0.081 0.919 39 H 0.258 0.742 40 H 0.141 0.859 41 H 0.107 0.893 42 H 0.123 0.877 43 H 0.099 0.901 44 H 0.254 0.746 45 H 0.185 0.815 46 H 0.166 0.834 47 H 0.241 0.759 48 H -0.214 1.214 49 H -0.210 1.210 50 H 0.201 0.799 51 H 0.117 0.883 52 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.187 2.810 -3.094 4.344 hybrid contribution 0.300 -0.425 1.136 1.249 sum -0.886 2.385 -1.958 3.210 Atomic orbital electron populations 1.22477 0.94085 1.03709 1.03497 1.22342 0.94408 0.92562 0.81550 1.21894 1.02481 0.90937 1.04214 1.22468 1.01663 1.02271 0.97289 1.86314 1.71472 1.23282 1.47220 1.18417 0.78510 0.80730 0.82613 1.90917 1.42175 1.71045 1.44253 1.44608 1.54904 1.11899 1.23207 1.22485 0.98746 0.77755 0.97635 0.87609 1.24269 1.00749 0.96432 0.98564 1.21766 0.87237 0.86773 0.97243 1.92890 1.65243 1.66158 1.92972 1.21892 0.96035 0.85972 0.96954 1.45605 1.38329 1.24452 1.27751 1.17991 0.79707 0.83663 0.83756 1.90879 1.59328 1.69555 1.24130 1.19779 1.00691 0.97610 0.98287 1.17919 0.93683 0.93576 0.83026 1.91590 1.85160 1.88108 1.45717 1.20875 1.02163 0.94868 0.96586 1.20509 0.95336 0.98008 0.95140 1.25151 1.06301 0.92247 0.95007 1.86594 1.40468 1.76386 1.31458 0.93932 0.76777 0.78702 0.85947 1.17092 0.96341 0.95023 0.85001 1.91241 1.85723 1.85015 1.45034 1.21334 0.99612 0.94382 0.93398 1.24004 1.04802 0.93231 0.96257 0.91954 0.89556 0.91731 0.91139 0.88420 0.91192 0.91683 0.89588 0.91874 0.74165 0.85888 0.89318 0.87736 0.90069 0.74626 0.81492 0.83412 0.75936 1.21422 1.20982 0.79889 0.88304 0.84594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.36 8.37 71.98 0.60 0.25 16 2 C 0.13 0.18 1.13 -10.80 -0.01 0.17 16 3 C -0.14 0.45 8.85 71.98 0.64 1.09 16 4 C -0.18 -0.30 8.37 71.98 0.60 0.30 16 5 O -0.37 -1.21 9.94 -55.43 -0.55 -1.76 16 6 C 0.64 2.57 8.06 129.79 1.05 3.61 16 7 O -0.59 -5.75 11.48 19.80 0.23 -5.53 16 8 N -0.69 2.37 5.36 -567.32 -3.04 -0.67 16 9 C 0.14 -0.67 4.23 45.58 0.19 -0.47 16 10 H 0.11 0.02 7.47 -2.39 -0.02 0.00 16 11 C -0.16 1.23 7.33 31.18 0.23 1.46 16 12 C 0.09 -0.65 1.67 -10.27 -0.02 -0.66 16 13 F -0.19 0.48 16.80 44.97 0.76 1.23 16 14 C 0.12 -0.65 5.37 86.38 0.46 -0.19 16 15 N -0.71 2.83 5.42 -466.12 -2.53 0.30 16 16 C 0.56 1.68 7.77 86.74 0.67 2.35 16 17 O -0.56 -6.55 15.34 -3.97 -0.06 -6.61 16 18 C -0.16 -0.04 5.88 -20.06 -0.12 -0.16 16 19 C 0.14 0.44 7.28 22.67 0.17 0.61 16 20 F -0.13 -1.21 15.55 44.97 0.70 -0.51 16 21 C -0.13 0.15 9.20 22.28 0.20 0.35 16 22 C -0.09 0.30 5.14 -19.78 -0.10 0.20 16 23 C -0.08 0.30 2.96 71.24 0.21 0.51 16 24 O -0.54 0.83 11.63 -148.98 -1.73 -0.91 16 25 Si 0.74 -1.91 29.56 68.60 2.03 0.12 16 26 C 0.09 -0.44 6.65 22.33 0.15 -0.30 16 27 F -0.09 0.65 13.69 44.97 0.62 1.27 16 28 C -0.07 0.41 9.51 22.57 0.21 0.62 16 29 C -0.14 1.34 7.28 31.12 0.23 1.56 16 30 H 0.06 0.08 8.14 -2.38 -0.02 0.07 16 31 H 0.09 -0.10 8.14 -2.39 -0.02 -0.12 16 32 H 0.06 0.46 5.88 -2.39 -0.01 0.45 16 33 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 34 H 0.10 -0.61 8.14 -2.39 -0.02 -0.63 16 35 H 0.07 -0.24 8.14 -2.38 -0.02 -0.26 16 36 H 0.06 0.44 5.88 -2.39 -0.01 0.43 16 37 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 38 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 39 H 0.42 -3.60 8.84 -92.71 -0.82 -4.42 16 40 H 0.12 -1.26 7.96 -2.39 -0.02 -1.28 16 41 H 0.09 -0.55 8.14 -2.39 -0.02 -0.57 16 42 H 0.10 -0.74 7.94 -2.39 -0.02 -0.76 16 43 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 44 H 0.42 -3.62 6.22 -92.71 -0.58 -4.20 16 45 H 0.17 -0.50 7.06 -2.91 -0.02 -0.52 16 46 H 0.15 -0.92 7.96 -2.39 -0.02 -0.94 16 47 H 0.39 -2.81 8.42 -74.06 -0.62 -3.43 16 48 H -0.29 -1.24 7.11 99.48 0.71 -0.53 16 49 H -0.28 -0.67 7.11 99.48 0.71 0.04 16 50 H 0.18 -2.32 6.41 -2.91 -0.02 -2.34 16 51 H 0.10 -0.84 8.14 -2.39 -0.02 -0.86 16 52 H 0.14 -1.88 8.07 -2.39 -0.02 -1.90 16 Total: 0.00 -25.04 433.56 0.82 -24.22 By element: Atomic # 1 Polarization: -21.50 SS G_CDS: -0.96 Total: -22.46 kcal Atomic # 6 Polarization: 5.94 SS G_CDS: 5.37 Total: 11.31 kcal Atomic # 7 Polarization: 5.20 SS G_CDS: -5.57 Total: -0.37 kcal Atomic # 8 Polarization: -12.69 SS G_CDS: -2.12 Total: -14.81 kcal Atomic # 9 Polarization: -0.08 SS G_CDS: 2.07 Total: 1.99 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: 2.03 Total: 0.12 kcal Total: -25.04 0.82 -24.22 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16499080_12360598.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.295 kcal (2) G-P(sol) polarization free energy of solvation -25.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -223.339 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.822 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.222 kcal (6) G-S(sol) free energy of system = (1) + (5) -222.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.60 seconds