Wall clock time and date at job start Thu Mar 4 2021 15:43:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.33812 * 122.44843 * 2 1 4 4 C 1.50697 * 124.52702 * 0.04920 * 3 2 1 5 5 O 1.42899 * 109.47337 * 46.25150 * 4 3 2 6 6 Si 1.86300 * 109.47458 * 166.25238 * 4 3 2 7 7 S 1.70623 * 110.95170 * 180.02562 * 3 2 1 8 8 C 1.75828 * 91.56191 * 359.97438 * 7 3 2 9 9 C 1.46588 * 125.45500 * 179.97438 * 8 7 3 10 10 O 1.21700 * 119.99884 * 180.02562 * 9 8 7 11 11 N 1.34781 * 119.99929 * 0.03344 * 9 8 7 12 12 C 1.46498 * 119.99684 * 179.97438 * 11 9 8 13 13 C 1.53003 * 109.47110 * 179.97438 * 12 11 9 14 14 F 1.39905 * 112.84759 * 48.79949 * 13 12 11 15 15 C 1.53772 * 113.61500 * 179.97438 * 13 12 11 16 16 C 1.53780 * 87.08160 * 140.06569 * 15 13 12 17 17 H 1.09002 * 113.61825 * 89.19829 * 16 15 13 18 18 N 1.46501 * 113.61901 * 220.02081 * 16 15 13 19 19 C 1.34772 * 120.00157 * 203.47101 * 18 16 15 20 20 O 1.21511 * 120.00404 * 359.97438 * 19 18 16 21 21 O 1.34638 * 120.00113 * 179.97438 * 19 18 16 22 22 C 1.45195 * 117.00189 * 179.97438 * 21 19 18 23 23 C 1.52995 * 109.47247 * 59.99898 * 22 21 19 24 24 C 1.52999 * 109.47391 * 179.97438 * 22 21 19 25 25 C 1.53003 * 109.47129 * 299.99603 * 22 21 19 26 26 C 1.53783 * 87.17307 * 334.61058 * 16 15 13 27 27 C 1.36645 * 109.08589 * 0.24549 * 8 7 3 28 28 H 1.08993 * 109.47316 * 84.17320 * 1 2 3 29 29 H 1.08996 * 109.47368 * 204.18177 * 1 2 3 30 30 H 1.09006 * 109.47075 * 324.17655 * 1 2 3 31 31 H 1.09006 * 109.47316 * 286.25329 * 4 3 2 32 32 H 0.96697 * 114.00136 * 59.99771 * 5 4 3 33 33 H 1.48496 * 110.00015 * 179.97438 * 6 4 3 34 34 H 1.48493 * 110.00018 * 301.31748 * 6 4 3 35 35 H 0.97001 * 120.00035 * 359.97438 * 11 9 8 36 36 H 1.08999 * 109.47365 * 59.99695 * 12 11 9 37 37 H 1.09003 * 109.46907 * 299.99052 * 12 11 9 38 38 H 1.09001 * 113.61869 * 25.51950 * 15 13 12 39 39 H 1.08996 * 113.61686 * 254.61081 * 15 13 12 40 40 H 0.96998 * 119.99837 * 23.19526 * 18 16 15 41 41 H 1.09000 * 109.47039 * 60.00083 * 23 22 21 42 42 H 1.09000 * 109.47421 * 179.97438 * 23 22 21 43 43 H 1.09001 * 109.47408 * 300.00141 * 23 22 21 44 44 H 1.09002 * 109.47153 * 59.99827 * 24 22 21 45 45 H 1.09003 * 109.47857 * 180.02562 * 24 22 21 46 46 H 1.09000 * 109.47016 * 299.99991 * 24 22 21 47 47 H 1.09001 * 109.46620 * 60.00414 * 25 22 21 48 48 H 1.09000 * 109.46962 * 179.97438 * 25 22 21 49 49 H 1.08997 * 109.47430 * 300.00529 * 25 22 21 50 50 H 1.08997 * 113.61675 * 139.93405 * 26 16 15 51 51 H 1.08999 * 113.61305 * 270.84009 * 26 16 15 52 52 H 1.07999 * 123.34993 * 179.75783 * 27 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1292 0.0000 4 6 1.6355 2.5161 0.0011 5 8 0.5925 2.5897 0.9751 6 14 2.9631 3.7549 0.4181 7 16 3.8969 0.7891 -0.0007 8 6 3.5936 -0.9428 -0.0002 9 6 4.6230 -1.9863 -0.0010 10 8 4.3000 -3.1597 -0.0011 11 7 5.9273 -1.6464 -0.0016 12 6 6.9560 -2.6893 -0.0018 13 6 8.3412 -2.0394 -0.0031 14 9 8.4729 -1.0394 0.9664 15 6 9.4973 -3.0533 -0.0028 16 6 10.2144 -2.1171 -0.9898 17 1 10.8302 -1.3598 -0.5046 18 7 10.9207 -2.8236 -2.0613 19 6 11.9477 -2.2276 -2.6987 20 8 12.2876 -1.1039 -2.3851 21 8 12.5972 -2.8771 -3.6831 22 6 13.6929 -2.1739 -4.3259 23 6 14.7605 -1.8324 -3.2846 24 6 14.3045 -3.0641 -5.4095 25 6 13.1686 -0.8842 -4.9606 26 6 8.8224 -1.6085 -1.4006 27 6 2.2445 -1.1601 -0.0051 28 1 -0.3633 0.1043 -1.0223 29 1 -0.3634 -0.9374 0.4209 30 1 -0.3633 0.8333 0.6015 31 1 1.2280 2.7385 -0.9852 32 1 0.8836 2.4027 1.8780 33 1 2.3946 5.1267 0.4218 34 1 3.5488 3.4437 1.7467 35 1 6.1847 -0.7111 -0.0018 36 1 6.8451 -3.3090 -0.8916 37 1 6.8458 -3.3086 0.8884 38 1 9.2312 -4.0192 -0.4321 39 1 10.0009 -3.1411 0.9599 40 1 10.6518 -3.7220 -2.3093 41 1 15.1340 -2.7512 -2.8324 42 1 15.5832 -1.3049 -3.7672 43 1 14.3251 -1.1983 -2.5122 44 1 13.5441 -3.3078 -6.1515 45 1 15.1273 -2.5364 -5.8918 46 1 14.6781 -3.9827 -4.9570 47 1 12.7332 -0.2501 -4.1883 48 1 13.9912 -0.3561 -5.4428 49 1 12.4080 -1.1274 -5.7025 50 1 8.7818 -0.5317 -1.5645 51 1 8.3714 -2.1787 -2.2127 52 1 1.8019 -2.1452 -0.0096 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16499080_6739946.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 15:43:42 Heat of formation + Delta-G solvation = -136.810552 kcal Electronic energy + Delta-G solvation = -35346.714666 eV Core-core repulsion = 30355.121044 eV Total energy + Delta-G solvation = -4991.593622 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.155 amu Computer time = 1.66 seconds Orbital eigenvalues (eV) -48.90656 -41.87157 -41.01732 -40.00660 -39.68770 -37.89501 -37.50543 -35.99637 -35.27470 -33.97353 -32.36176 -30.16831 -29.45871 -28.36601 -28.29949 -27.11276 -26.35051 -24.88283 -24.12918 -22.52638 -21.91927 -21.42610 -20.74032 -20.27376 -19.52306 -19.18372 -18.21223 -17.75305 -17.39775 -17.26889 -17.21994 -16.99559 -16.69292 -16.54899 -16.34260 -16.04689 -15.84799 -15.60429 -15.38570 -15.33171 -15.08729 -14.74751 -14.53126 -14.48689 -14.43697 -13.96367 -13.88066 -13.61147 -13.53503 -13.34547 -13.26949 -13.16149 -12.96295 -12.93269 -12.90855 -12.86417 -12.78220 -12.45417 -12.41441 -12.36196 -12.29990 -11.85470 -11.75569 -11.48013 -11.39676 -11.31320 -11.12307 -10.78375 -10.41627 -10.23540 -9.79625 -9.40616 -5.12581 -0.69212 0.26822 0.67098 1.08543 1.12960 1.26981 1.52440 1.70816 1.85348 1.86225 2.02228 2.94632 3.04407 3.06133 3.24033 3.24449 3.52671 3.54743 3.57164 3.70017 3.74248 3.79889 3.94593 4.10156 4.18933 4.30734 4.32259 4.47995 4.50994 4.55027 4.56574 4.58145 4.59576 4.61493 4.72932 4.76882 4.80147 4.81108 4.84825 4.86026 4.87745 4.88012 4.99840 5.00613 5.11642 5.17046 5.27293 5.29189 5.37312 5.39273 5.44673 5.57935 6.19940 6.35379 6.37202 6.91122 7.32329 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.105 4.105 2 C -0.101 4.101 3 C -0.236 4.236 4 C -0.034 4.034 5 O -0.529 6.529 6 Si 0.720 3.280 7 S 0.246 5.754 8 C -0.285 4.285 9 C 0.594 3.406 10 O -0.565 6.565 11 N -0.717 5.717 12 C 0.115 3.885 13 C 0.086 3.914 14 F -0.194 7.194 15 C -0.142 4.142 16 C 0.140 3.860 17 H 0.105 0.895 18 N -0.687 5.687 19 C 0.644 3.356 20 O -0.593 6.593 21 O -0.368 6.368 22 C 0.128 3.872 23 C -0.181 4.181 24 C -0.138 4.138 25 C -0.180 4.180 26 C -0.162 4.162 27 C -0.057 4.057 28 H 0.072 0.928 29 H 0.066 0.934 30 H 0.090 0.910 31 H 0.140 0.860 32 H 0.389 0.611 33 H -0.270 1.270 34 H -0.264 1.264 35 H 0.410 0.590 36 H 0.107 0.893 37 H 0.082 0.918 38 H 0.138 0.862 39 H 0.100 0.900 40 H 0.421 0.579 41 H 0.061 0.939 42 H 0.086 0.914 43 H 0.064 0.936 44 H 0.070 0.930 45 H 0.097 0.903 46 H 0.069 0.931 47 H 0.064 0.936 48 H 0.085 0.915 49 H 0.062 0.938 50 H 0.087 0.913 51 H 0.124 0.876 52 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.426 -0.212 -3.222 4.039 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.113 4.113 3 C -0.356 4.356 4 C -0.145 4.145 5 O -0.338 6.338 6 Si 0.621 3.379 7 S 0.516 5.484 8 C -0.405 4.405 9 C 0.381 3.619 10 O -0.446 6.446 11 N -0.368 5.368 12 C -0.008 4.008 13 C 0.066 3.934 14 F -0.175 7.175 15 C -0.180 4.180 16 C 0.035 3.965 17 H 0.123 0.877 18 N -0.346 5.346 19 C 0.397 3.603 20 O -0.484 6.484 21 O -0.283 6.283 22 C 0.091 3.909 23 C -0.238 4.238 24 C -0.195 4.195 25 C -0.237 4.237 26 C -0.201 4.201 27 C -0.091 4.091 28 H 0.090 0.910 29 H 0.085 0.915 30 H 0.109 0.891 31 H 0.158 0.842 32 H 0.239 0.761 33 H -0.195 1.195 34 H -0.190 1.190 35 H 0.246 0.754 36 H 0.125 0.875 37 H 0.100 0.900 38 H 0.156 0.844 39 H 0.118 0.882 40 H 0.259 0.741 41 H 0.080 0.920 42 H 0.104 0.896 43 H 0.083 0.917 44 H 0.089 0.911 45 H 0.116 0.884 46 H 0.088 0.912 47 H 0.083 0.917 48 H 0.104 0.896 49 H 0.081 0.919 50 H 0.105 0.895 51 H 0.142 0.858 52 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.754 1.205 -3.072 4.998 hybrid contribution -1.916 -1.000 1.105 2.427 sum 1.838 0.205 -1.967 2.700 Atomic orbital electron populations 1.20733 0.88403 1.03908 1.03286 1.18767 0.98787 0.90563 1.03223 1.24568 0.98923 1.01009 1.11105 1.24586 0.97830 0.94795 0.97337 1.86566 1.34734 1.91790 1.20700 0.94633 0.80056 0.77547 0.85679 1.82573 1.02308 0.96272 1.67251 1.24620 0.97723 0.98360 1.19750 1.17079 0.82136 0.87115 0.75572 1.90837 1.82242 1.19690 1.51804 1.45648 1.04817 1.11192 1.75183 1.21915 0.83498 0.90264 1.05161 1.21867 0.95086 0.88286 0.88134 1.92887 1.96823 1.62776 1.64969 1.23990 0.93413 0.99144 1.01484 1.22438 0.91426 0.95633 0.86970 0.87676 1.44604 1.32221 1.20537 1.37247 1.18412 0.80066 0.82923 0.78862 1.90917 1.68881 1.19873 1.68695 1.86313 1.46756 1.47793 1.47409 1.22341 0.83385 0.92632 0.92499 1.22479 0.98826 1.02675 0.99799 1.21893 1.01411 0.99780 0.96431 1.22470 1.02770 0.97025 1.01432 1.24275 0.95507 1.04337 0.95966 1.20792 0.91203 1.00290 0.96788 0.90961 0.91503 0.89122 0.84210 0.76131 1.19550 1.18963 0.75393 0.87541 0.89969 0.84403 0.88177 0.74132 0.91955 0.89561 0.91745 0.91125 0.88417 0.91196 0.91692 0.89594 0.91852 0.89472 0.85800 0.83485 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.04 9.74 71.24 0.69 0.73 16 2 C -0.10 -0.13 5.75 -21.05 -0.12 -0.25 16 3 C -0.24 0.29 5.62 24.68 0.14 0.43 16 4 C -0.03 0.11 2.68 71.23 0.19 0.30 16 5 O -0.53 0.75 10.27 -148.98 -1.53 -0.78 16 6 Si 0.72 -2.75 30.97 68.60 2.12 -0.62 16 7 S 0.25 -0.64 19.33 -56.49 -1.09 -1.73 16 8 C -0.28 -0.90 6.45 24.08 0.16 -0.75 16 9 C 0.59 3.22 7.78 86.42 0.67 3.89 16 10 O -0.56 -7.13 16.84 -4.35 -0.07 -7.20 16 11 N -0.72 0.44 5.46 -467.16 -2.55 -2.11 16 12 C 0.12 -0.43 5.37 86.38 0.46 0.03 16 13 C 0.09 -0.47 1.67 -10.21 -0.02 -0.49 16 14 F -0.19 0.05 16.79 44.97 0.76 0.81 16 15 C -0.14 1.20 7.28 31.12 0.23 1.43 16 16 C 0.14 -0.56 4.19 45.52 0.19 -0.37 16 17 H 0.11 0.10 7.50 -2.39 -0.02 0.08 16 18 N -0.69 2.06 5.37 -567.61 -3.05 -0.99 16 19 C 0.64 2.79 8.06 129.79 1.05 3.84 16 20 O -0.59 -5.97 11.50 19.81 0.23 -5.74 16 21 O -0.37 -1.30 9.94 -55.47 -0.55 -1.85 16 22 C 0.13 0.21 1.13 -10.79 -0.01 0.20 16 23 C -0.18 -0.40 8.37 71.98 0.60 0.21 16 24 C -0.14 0.43 8.85 71.98 0.64 1.07 16 25 C -0.18 -0.34 8.37 71.98 0.60 0.26 16 26 C -0.16 0.99 7.34 31.18 0.23 1.22 16 27 C -0.06 -0.22 9.78 21.72 0.21 0.00 16 28 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 29 H 0.07 -0.06 8.10 -2.39 -0.02 -0.07 16 30 H 0.09 -0.02 5.54 -2.38 -0.01 -0.04 16 31 H 0.14 -0.75 7.96 -2.38 -0.02 -0.77 16 32 H 0.39 -2.42 8.70 -74.06 -0.64 -3.07 16 33 H -0.27 -0.69 7.11 99.48 0.71 0.02 16 34 H -0.26 -0.05 7.11 99.48 0.71 0.66 16 35 H 0.41 -1.47 7.30 -92.71 -0.68 -2.15 16 36 H 0.11 -0.62 7.95 -2.39 -0.02 -0.64 16 37 H 0.08 -0.19 8.14 -2.39 -0.02 -0.20 16 38 H 0.14 -1.85 8.07 -2.39 -0.02 -1.87 16 39 H 0.10 -0.79 8.14 -2.39 -0.02 -0.81 16 40 H 0.42 -3.47 8.82 -92.71 -0.82 -4.28 16 41 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 42 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 43 H 0.06 0.48 5.88 -2.39 -0.01 0.46 16 44 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 45 H 0.10 -0.60 8.14 -2.39 -0.02 -0.62 16 46 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 47 H 0.06 0.46 5.88 -2.39 -0.01 0.44 16 48 H 0.09 -0.11 8.14 -2.39 -0.02 -0.12 16 49 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 50 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 51 H 0.12 -1.11 7.97 -2.39 -0.02 -1.12 16 52 H 0.15 0.67 8.06 -2.91 -0.02 0.64 16 Total: 0.00 -21.95 436.41 -0.94 -22.90 By element: Atomic # 1 Polarization: -13.31 SS G_CDS: -1.12 Total: -14.43 kcal Atomic # 6 Polarization: 5.83 SS G_CDS: 5.91 Total: 11.75 kcal Atomic # 7 Polarization: 2.50 SS G_CDS: -5.60 Total: -3.10 kcal Atomic # 8 Polarization: -13.64 SS G_CDS: -1.93 Total: -15.57 kcal Atomic # 9 Polarization: 0.05 SS G_CDS: 0.76 Total: 0.81 kcal Atomic # 14 Polarization: -2.75 SS G_CDS: 2.12 Total: -0.62 kcal Atomic # 16 Polarization: -0.64 SS G_CDS: -1.09 Total: -1.73 kcal Total: -21.95 -0.94 -22.90 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16499080_6739946.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -113.914 kcal (2) G-P(sol) polarization free energy of solvation -21.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.941 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -136.811 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.66 seconds