Wall clock time and date at job start Thu Mar 4 2021 17:49:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86301 * 109.47346 * 2 1 4 4 C 1.50699 * 109.47003 * 240.00068 * 2 1 3 5 5 C 1.35003 * 126.43271 * 149.97881 * 4 2 1 6 6 N 1.33587 * 108.65948 * 179.97438 * 5 4 2 7 7 C 1.32411 * 109.21964 * 0.02562 * 6 5 4 8 8 C 1.41255 * 132.11593 * 180.02562 * 7 6 5 9 9 Br 1.89102 * 120.25695 * 359.69255 * 8 7 6 10 10 C 1.35702 * 119.48677 * 179.97438 * 8 7 6 11 11 C 1.41761 * 119.53935 * 0.05848 * 10 8 7 12 12 C 1.47567 * 120.01544 * 179.97438 * 11 10 8 13 13 O 1.21595 * 120.00412 * 179.97438 * 12 11 10 14 14 N 1.34782 * 119.99822 * 359.96049 * 12 11 10 15 15 C 1.46497 * 119.99907 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47357 * 179.97438 * 15 14 12 17 17 F 1.39907 * 112.84952 * 316.19782 * 16 15 14 18 18 C 1.53786 * 113.61460 * 87.49857 * 16 15 14 19 19 C 1.53783 * 87.08063 * 139.98571 * 18 16 15 20 20 H 1.08995 * 113.61684 * 89.11534 * 19 18 16 21 21 C 1.52998 * 113.69267 * 220.01411 * 19 18 16 22 22 O 1.42909 * 109.46802 * 272.53760 * 21 19 18 23 23 C 1.53785 * 113.61878 * 185.00097 * 16 15 14 24 24 C 1.36502 * 119.97631 * 359.89765 * 11 10 8 25 25 N 1.35947 * 120.50199 * 0.08424 * 24 11 10 26 26 H 0.96699 * 113.99491 * 300.00090 * 1 2 3 27 27 H 1.08998 * 109.47583 * 120.00436 * 2 1 3 28 28 H 1.48502 * 109.99874 * 178.68192 * 3 2 1 29 29 H 1.48496 * 110.00069 * 299.99717 * 3 2 1 30 30 H 1.07999 * 125.66927 * 0.02562 * 5 4 2 31 31 H 1.08001 * 120.23390 * 179.97438 * 10 8 7 32 32 H 0.96997 * 120.00074 * 359.97438 * 14 12 11 33 33 H 1.08999 * 109.47421 * 300.00005 * 15 14 12 34 34 H 1.09004 * 109.47654 * 59.99750 * 15 14 12 35 35 H 1.08989 * 113.61531 * 254.53270 * 18 16 15 36 36 H 1.09000 * 113.61042 * 25.44074 * 18 16 15 37 37 H 1.09004 * 109.47167 * 32.52794 * 21 19 18 38 38 H 1.08997 * 109.47392 * 152.53486 * 21 19 18 39 39 H 0.96700 * 113.99350 * 180.02562 * 22 21 19 40 40 H 1.09001 * 113.60975 * 334.56653 * 23 16 15 41 41 H 1.08996 * 113.61395 * 105.38589 * 23 16 15 42 42 H 1.07993 * 119.75011 * 180.02562 * 24 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 3.0852 -0.4610 -1.8853 6 7 3.1766 -1.2966 -2.9236 7 6 2.1070 -2.0767 -2.9507 8 6 1.7131 -3.1140 -3.8248 9 35 2.8099 -3.5950 -5.2883 10 6 0.5386 -3.7589 -3.6096 11 6 -0.2752 -3.3812 -2.5121 12 6 -1.5547 -4.0750 -2.2686 13 8 -2.2524 -3.7511 -1.3269 14 7 -1.9500 -5.0676 -3.0903 15 6 -3.2199 -5.7567 -2.8482 16 6 -3.4290 -6.8311 -3.9173 17 9 -3.1137 -6.3846 -5.2051 18 6 -2.7956 -8.1863 -3.5608 19 6 -4.0542 -8.8416 -4.1537 20 1 -3.9789 -9.0446 -5.2219 21 6 -4.5551 -10.0459 -3.3539 22 8 -3.8929 -11.2280 -3.8080 23 6 -4.7939 -7.5337 -3.8259 24 6 0.1257 -2.3764 -1.6797 25 7 1.3024 -1.7304 -1.8947 26 1 -0.3932 0.4417 0.7651 27 1 1.7924 -0.5139 0.8899 28 1 3.5346 1.7702 0.0321 29 1 1.5616 2.4679 -1.2085 30 1 3.8137 0.2888 -1.6143 31 1 0.2255 -4.5535 -4.2706 32 1 -1.3937 -5.3256 -3.8418 33 1 -3.1983 -6.2231 -1.8633 34 1 -4.0378 -5.0375 -2.8916 35 1 -1.8857 -8.4036 -4.1201 36 1 -2.6834 -8.3473 -2.4887 37 1 -4.3417 -9.8936 -2.2958 38 1 -5.6304 -10.1545 -3.4957 39 1 -4.1624 -12.0326 -3.3441 40 1 -5.2278 -7.5163 -2.8262 41 1 -5.4974 -7.2231 -4.5983 42 1 -0.4970 -2.0919 -0.8445 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_16500592_12335884.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Mar 4 2021 17:49:22 Heat of formation + Delta-G solvation = -36.501896 kcal Electronic energy + Delta-G solvation = -30703.676811 eV Core-core repulsion = 26034.643266 eV Total energy + Delta-G solvation = -4669.033545 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.042 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.88285 -44.38897 -41.24987 -39.83520 -38.56406 -37.91917 -37.20187 -35.97624 -35.32552 -32.85520 -32.04854 -30.45960 -30.17293 -27.48100 -26.99430 -26.90303 -25.25587 -24.21592 -22.61095 -22.27473 -21.94053 -20.67644 -19.35367 -19.00213 -18.64191 -18.26430 -18.03703 -17.53685 -17.34082 -16.97925 -16.78948 -16.43297 -16.20622 -16.15668 -15.96669 -15.68467 -15.56159 -15.34996 -15.00477 -14.83007 -14.69044 -14.33199 -14.20894 -13.82394 -13.45954 -13.39027 -13.35820 -13.20699 -13.11461 -12.84285 -12.36847 -12.10227 -11.90586 -11.72134 -11.65691 -11.48685 -11.45012 -11.33927 -11.28199 -10.80901 -10.77994 -10.40681 -10.11514 -9.17153 -5.00629 -0.99531 -0.49032 0.09314 0.87466 1.04450 1.37344 1.61135 1.67540 1.82395 2.01999 2.12949 2.65219 2.92187 3.03412 3.08399 3.11622 3.18174 3.28155 3.33379 3.36017 3.47274 3.55161 3.80360 3.83291 3.96252 4.21353 4.25890 4.28235 4.34812 4.36892 4.41837 4.46108 4.56901 4.61707 4.65087 4.72997 4.84478 4.86127 4.90982 4.99334 5.07520 5.10996 5.38568 5.45169 6.14033 6.29983 6.74612 6.82710 6.89357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.051 4.051 3 Si 0.822 3.178 4 C -0.042 4.042 5 C 0.016 3.984 6 N -0.494 5.494 7 C 0.225 3.775 8 C -0.084 4.084 9 Br 0.007 6.993 10 C -0.021 4.021 11 C -0.175 4.175 12 C 0.584 3.416 13 O -0.556 6.556 14 N -0.710 5.710 15 C 0.114 3.886 16 C 0.078 3.922 17 F -0.198 7.198 18 C -0.143 4.143 19 C -0.115 4.115 20 H 0.084 0.916 21 C 0.083 3.917 22 O -0.600 6.600 23 C -0.133 4.133 24 C 0.174 3.826 25 N -0.357 5.357 26 H 0.416 0.584 27 H 0.112 0.888 28 H -0.272 1.272 29 H -0.310 1.310 30 H 0.202 0.798 31 H 0.182 0.818 32 H 0.413 0.587 33 H 0.106 0.894 34 H 0.083 0.917 35 H 0.076 0.924 36 H 0.118 0.882 37 H 0.066 0.934 38 H 0.058 0.942 39 H 0.397 0.603 40 H 0.129 0.871 41 H 0.088 0.912 42 H 0.200 0.800 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.979 -1.744 7.174 8.905 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.382 6.382 2 C -0.159 4.159 3 Si 0.725 3.275 4 C -0.154 4.154 5 C -0.133 4.133 6 N -0.213 5.213 7 C -0.021 4.021 8 C -0.166 4.166 9 Br 0.092 6.908 10 C -0.047 4.047 11 C -0.183 4.183 12 C 0.371 3.629 13 O -0.436 6.436 14 N -0.362 5.362 15 C -0.010 4.010 16 C 0.059 3.941 17 F -0.179 7.179 18 C -0.181 4.181 19 C -0.134 4.134 20 H 0.102 0.898 21 C 0.005 3.995 22 O -0.408 6.408 23 C -0.171 4.171 24 C 0.048 3.952 25 N -0.030 5.030 26 H 0.269 0.731 27 H 0.129 0.871 28 H -0.198 1.198 29 H -0.238 1.238 30 H 0.219 0.781 31 H 0.199 0.801 32 H 0.250 0.750 33 H 0.125 0.875 34 H 0.102 0.898 35 H 0.095 0.905 36 H 0.137 0.863 37 H 0.084 0.916 38 H 0.076 0.924 39 H 0.247 0.753 40 H 0.147 0.853 41 H 0.107 0.893 42 H 0.217 0.783 Dipole moment (debyes) X Y Z Total from point charges -3.544 -0.965 5.402 6.533 hybrid contribution -0.552 -0.802 0.049 0.975 sum -4.097 -1.768 5.451 7.044 Atomic orbital electron populations 1.86323 1.16715 1.82727 1.52394 1.24715 0.86348 1.11352 0.93514 0.94124 0.77884 0.71250 0.84269 1.21707 0.96678 0.95131 1.01843 1.22688 0.97342 1.00739 0.92513 1.70783 1.20501 1.08095 1.21875 1.20712 0.89942 0.99937 0.91511 1.20549 0.98727 0.99359 0.98006 1.96827 1.66921 1.90634 1.36437 1.21362 0.90032 0.97827 0.95504 1.19271 0.98476 1.01345 0.99181 1.17374 0.83944 0.79561 0.82068 1.90840 1.55701 1.65931 1.31111 1.45612 1.23566 1.35703 1.31316 1.21997 0.85785 0.94260 0.98942 1.22189 1.00003 0.93540 0.78355 1.92855 1.93916 1.90691 1.40396 1.23764 0.98535 0.92069 1.03690 1.22489 0.96677 0.93604 1.00608 0.89810 1.22245 0.95916 0.84027 0.97267 1.86447 1.69124 1.19065 1.66209 1.23577 0.94739 0.92938 1.05798 1.22309 0.84546 0.89326 0.99038 1.42735 1.15209 1.24136 1.20962 0.73061 0.87082 1.19807 1.23804 0.78140 0.80079 0.74953 0.87546 0.89828 0.90498 0.86348 0.91563 0.92370 0.75318 0.85325 0.89342 0.78347 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.16 10.88 -148.98 -1.62 0.54 16 2 C -0.05 0.16 3.05 71.24 0.22 0.38 16 3 Si 0.82 -4.29 31.28 68.60 2.15 -2.14 16 4 C -0.04 -0.24 6.28 41.01 0.26 0.02 16 5 C 0.02 0.13 10.44 83.68 0.87 1.01 16 6 N -0.49 -6.44 11.30 -194.11 -2.19 -8.63 16 7 C 0.22 2.39 7.59 134.19 1.02 3.41 16 8 C -0.08 -0.55 6.24 22.42 0.14 -0.41 16 9 Br 0.01 0.04 33.72 -20.37 -0.69 -0.65 16 10 C -0.02 -0.03 9.26 22.55 0.21 0.18 16 11 C -0.18 -0.46 5.84 -20.35 -0.12 -0.58 16 12 C 0.58 1.48 7.76 86.70 0.67 2.15 16 13 O -0.56 -4.59 16.27 -4.02 -0.07 -4.66 16 14 N -0.71 1.70 5.40 -466.23 -2.52 -0.82 16 15 C 0.11 -0.49 5.42 86.38 0.47 -0.02 16 16 C 0.08 -0.35 1.74 -10.27 -0.02 -0.37 16 17 F -0.20 -0.14 16.58 44.97 0.75 0.60 16 18 C -0.14 0.73 7.08 31.12 0.22 0.95 16 19 C -0.12 0.43 3.98 -10.26 -0.04 0.39 16 20 H 0.08 0.05 8.14 -2.39 -0.02 0.03 16 21 C 0.08 -0.42 6.89 71.98 0.50 0.07 16 22 O -0.60 0.47 13.66 -148.98 -2.04 -1.56 16 23 C -0.13 0.92 7.10 31.12 0.22 1.14 16 24 C 0.17 0.85 9.91 83.65 0.83 1.67 16 25 N -0.36 -2.79 2.93 -337.71 -0.99 -3.78 16 26 H 0.42 -6.11 8.74 -74.06 -0.65 -6.76 16 27 H 0.11 -0.90 7.96 -2.39 -0.02 -0.92 16 28 H -0.27 0.43 6.91 99.48 0.69 1.12 16 29 H -0.31 -1.51 7.11 99.48 0.71 -0.80 16 30 H 0.20 0.65 6.77 -2.91 -0.02 0.63 16 31 H 0.18 -0.96 6.44 -2.91 -0.02 -0.98 16 32 H 0.41 -2.19 6.06 -92.71 -0.56 -2.75 16 33 H 0.11 -0.68 7.84 -2.39 -0.02 -0.70 16 34 H 0.08 -0.27 8.14 -2.39 -0.02 -0.29 16 35 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.12 -0.97 7.66 -2.39 -0.02 -0.99 16 37 H 0.07 -0.56 7.85 -2.38 -0.02 -0.58 16 38 H 0.06 -0.40 8.14 -2.39 -0.02 -0.42 16 39 H 0.40 -3.59 9.12 -74.06 -0.68 -4.26 16 40 H 0.13 -1.46 8.06 -2.39 -0.02 -1.48 16 41 H 0.09 -0.53 8.14 -2.39 -0.02 -0.55 16 42 H 0.20 0.71 6.19 -2.91 -0.02 0.69 16 Total: 0.00 -27.86 378.02 -2.51 -30.37 By element: Atomic # 1 Polarization: -18.51 SS G_CDS: -0.74 Total: -19.25 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 5.44 Total: 9.98 kcal Atomic # 7 Polarization: -7.53 SS G_CDS: -5.70 Total: -13.24 kcal Atomic # 8 Polarization: -1.96 SS G_CDS: -3.72 Total: -5.68 kcal Atomic # 9 Polarization: -0.14 SS G_CDS: 0.75 Total: 0.60 kcal Atomic # 14 Polarization: -4.29 SS G_CDS: 2.15 Total: -2.14 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -27.86 -2.51 -30.37 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_16500592_12335884.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.130 kcal (2) G-P(sol) polarization free energy of solvation -27.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.512 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.372 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.502 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds